Scientific Visualization and Computer Graphics > CS > JBI > FWN > RUG

Journal Articles

J. F. Kruiger, A. Hassoumi, H. J. Schulz, A. Telea, and C. Hurter. Multidimensional Data Exploration by Explicitly Controlled Animation. Informatics, 4(3), 2017.   bib
J. A. M. Flores, L. Linsen, and A. Telea. Skeleton-based Scagnostics. IEEE TVCG, 2017.   doi
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C. Hurter, S. Puechmorel, F. Nicol, and A. Telea. Functional Decomposition for Bundled Simplification of Trail Sets. IEEE TVCG, 2017.   doi
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P. Rauber, A. Falcao, and A. Telea. Projections as Visual Aids for Classification System Design. Information Visualization, 2017.   doi
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A. Lhuillier, C. Hurter, and A. Telea. State of the Art in Edge and Trail Bundling Techniques. CGF, 36(3):619–645, 2017.   bib
J. Kruiger, R. Martins, P. Rauber, A. Kerren, S. Kobourov, and A. Telea. Graph Layouts by t-SNE. CGF, 36(3):283–294, 2017.   bib
Henrik Lieng, Jiri Kosinka, Jingjing Shen, and Neil Dodgson. A Colour Interpolation Scheme for Topologically Unrestricted Gradient Meshes. COMPUTER GRAPHICS FORUM, 36(6):112–121, 2017.   doi
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Kai Hormann and Jiri Kosinka. Discretizing Wachspress kernels is safe. Computer aided geometric design, 52-53:126–134, 2017.   doi
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Michal Bizzarri, Miroslav Lávicka, and Jiri Kosinka. Skinning and blending with rational envelope surfaces. Computer-Aided design, 87:41–51, 2017.   doi
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Michael Barton and Jiri Kosinka. Towards optimal advection using stretch-maximizing stream surfaces. Computer aided geometric design, 52-53:3–12, 2017.   doi
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Venustiano Soancatl Aguilar, Jasper J. van de Gronde, Claudine J. C. Lamoth, Natasha M. Maurits, and Jos B. T. M. Roerdink. Assessing Postural Control Performance during Exergaming based on Speed and Curvature of Body Movements. IEEE Transactions on Neural Systems and Rehabilitation Engineering, 2017.   doi
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D. Punzo, J. M. van der Hulst, Roerdink, J. B. T. M., J.C. Fillion-Robin, and L. Yu. SlicerAstro: a 3-D interactive visual analytics tool for HI data. Astronomy and Computing, 2017. accepted.   bib
Venustiano Soancatl Aguilar, Jasper J. van de Gronde, Claudine J. C. Lamoth, Mike van Diest, Natasha M. Maurits, and Jos B. T. M. Roerdink. Visual Data Exploration for Balance Quantification in Real-Time During Exergaming. PLOS ONE, 12(1):e0170906, January 2017.   doi
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J. Kustra, A. Jalba, and A. Telea. Computing Refined Skeletal Features from Medial Point Clouds. Pattern Recognition Letters, 76(C):13–21, 2016.   bib
R. da Silva, P. Rauber, and A. Telea. Beyond the Third Dimension: Visualizing High-dimensional Data with Projections. Computing in Science & Engineering, 18(5):98–107, 2016.   bib
A. Tagliasacchi, T. Delame, M. Spagnuolo, N. Amenta, and A. Telea. 3D Skeletons: A State-of-the-Art Report. CGF (Eurographics State-of-the-Art Reports), 35(2):573–597, 2016.   bib
J. Koehoorn, A. Sobiecki, P. Rauber, A. Jalba, and A. Telea. Efficient and Effective Automated Digital Hair Removal from Dermoscopy Images. Math. Morphol. Theory Appl., 1, 2016.   bib
C. Feng, A. Jalba, and A. Telea. Improved Part-Based Segmentation of Voxel Shapes by Skeleton Cut Spaces. Math. Morphol. Theory Appl., 1, 2016.   bib
Urska Zore, Bert Jüttler, and Jiri Kosinka. On the linear independence of truncated hierarchical generating systems. Journal of Computational and Applied Mathematics, 306:200–216, 11 2016.   doi
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Flora Ponjou Tasse, Jiri Kosinka, and Neil Dodgson. How well do saliency-based features perform for shape retrieval? Computers & graphics-Uk, 59:57–67, 10 2016.   doi
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Michal Bizzarri, Miroslav Lávicka, and Jiri Kosinka. Medial axis transforms yielding rational envelopes. Computer aided geometric design, 46:92–102, 8 2016.   doi
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Neil Dodgson and Jiri Kosinka. Can local NURBS refinement be achieved by modifying only the user interface? Computer-Aided design, 71:28–38, 2016.   doi
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Jiri Kosinka and Michael Barton. Convergence of barycentric coordinates to barycentric kernels. Computer aided geometric design, 43:200–210, 2016.   doi
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Jingjing Shen, Jiri Kosinka, Malcolm Sabin, and Neil Dodgson. Converting a CAD model into a non-uniform subdivision surface. Computer aided geometric design, 2016.   doi
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D. Mudali, M. Biehl, S. K. Meles and R. J. Renken, D. García-García, P. Clavero and J. Arbizu, J. A. Obeso, M. C. Rodriguez-Oroz and K. L. Leenders, and J. B. T.M. Roerdink. Differentiating Early and Late Stage Parkinson’s Disease Patients from Healthy Controls. Journal of Biomedical Engineering and Medical Imaging, 3(6), 2016.   doi
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D. Punzo, J. M. van der Hulst, and Roerdink, J. B. T. M.. Finding faint HI structure in and around galaxies: scraping the barrel. Astronomy and Computing, 17:163176, October 2016.   bib
Paulo E. Rauber, Samuel G. Fadel, Falcao, Alexandre X., and Alexandru C. Telea. Visualizing the Hidden Activity of Artificial Neural Networks. IEEE Transactions on Visualization and Computer Graphics (Proceedings of the Visual Analytics Science and Technology 2016), 23(01), January 2017.   bib
P Yang, G Clapworthy, F Dong, Codreanu, VB, DP Williams, BQ Liu, JBTM Roerdink, and ZK Deng. GSWO: A Programming Model for GPU-enabled Parallelization of Sliding Window Operations in Image Processing. Signal Processing: Image Communication, 47:332345, 2016.   doi
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Jasper J. van de Gronde, André R. Offringa, and Jos B. T. M. Roerdink. Efficient and Robust Path Openings using the Scale-Invariant Rank Operator. Journal of Mathematical Imaging and Vision, 56(3):455–471, 2016.   doi
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David Williams, Deborah Mudali, Hugo Buddelmeijer, Parisa Noorishad, Sanne Meles , Remco Renken, Nico Leenders, Edwin Valentijn, and Jos Roerdink. Visualization of Decision Tree State for the Classification of Parkinson’s Disease. Journal of Biomedical Engineering and Medical Imaging, 3(3):25, 2016.   doi
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M. van der Zwan, V. Codreanu, and A. Telea. CUBu: Universal real-time bundling for large graphs. IEEE Transactions on Visualization and Computer Graphics, 22(12):2250–2263, 2016.   doi
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A.C. Jalba, A. Sobiecki, and A.C. Telea. An Unified Multiscale Framework for Planar, Surface, and Curve Skeletonization. Pattern Analysis and Machine Intelligence, IEEE Transactions on, 38(1):30–45, Jan 2016.   doi
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Danilo Coimbra, Rafael Messias Martins, Fernando V. Paulovich, and A. C. Telea. Explaining 3D Dimensionality Reduction Plots. Information Visualization, 15(2):154–172, 2016.   doi
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Herman Schubert, Jasper J. van de Gronde, and Jos B. T. M. Roerdink. Efficient Computation of Greyscale Path Openings. Mathematical Morphology - Theory and Applications, 1(1):189–202, 2016.   doi
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Jasper J. van de Gronde and Jos B. T. M. Roerdink. Generalized Morphology using Sponges. Mathematical Morphology - Theory and Applications, 1(1):18–41, 2016.   doi
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Mike van Diest, Jan Stegenga, Heinrich J. Wörtche, Jos B. T. M. Roerdink, Gijsbertus J. Verkerke, and Claudine J. C. Lamoth. Quantifying Postural Control during Exergaming Using Multivariate Whole-Body Movement Data: A Self-Organizing Maps Approach. PLoS ONE, 10(7):e0134350, 2015.   doi
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A. Sobiecki, A. Jalba, and A. Telea. Automatic Gap Restoration in 2D and 3D Digital Images. ICTOpen 2015, Amersfoort, March 2015.   bib
A. Sobiecki, J. Koehoorn, D. Boda, C. Solovan, A. Diaconeasa, A. Jalba, and A. Telea. A New Efficient Method for Digital Hair Removal by Dense Threshold Analysis. Proc. 4th World Congress of Dermoscopy (IDS), Vienna, Austria, 2015. poster and extended abstract.   bib
D. Mudali, L. K. Teune, R. J. Renken and K. L. Leenders, and J. B. T. M. Roerdink. Classification of Parkinsonian Syndromes from FDG-PET Brain Data Using Decision Trees with SSM/PCA Features. Computational and Mathematical Methods in Medicine, Article ID 136921:1–10, 2015.   url
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Maarten H. Everts, Eric Begue, Henk Bekker and Jos B. T. M. Roerdink, and Tobias Isenberg. Exploration of the Brain’s White Matter Structure through Visual Abstraction and Multi-Scale Local Fiber Tract Contraction. IEEE Transactions on Visualization and Computer Graphics, 21(7):808–821, 2015.   doi
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Andrei C. Jalba, Michel A. Westenberg, and Jos B. T. M. Roerdink. Interactive Segmentation and Visualization of DTI Data Using a Hierarchical Watershed Representation. IEEE Transactions on Image Processing, 24(3):1025–1035, March 2015.   bib
Valeriu Codreanu, Bob Dröge, David Williams, Burhan Yasar, Po Yang, Baoquan and Dong Liu, Olarik Surinta, Schomaker, Lambert R.B., Jos B.T.M. Roerdink, and Wiering, Marco A.. Evaluating automatically parallelized versions of the support vector machine. Concurrency and Computation: Practice and Experience, 2014.   doi
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Laura K. Teune, Fijanne Strijkert, Remco J. Renken, Gerbrand J. Izaks, Jeroen J. de Vries, Marcel Segbers, Jos B.T.M. Roerdink , Rudi A.J.O. Dierckx, and Klaus L. Leenders. The Alzheimer’s disease-related glucose metabolic brain pattern. Current Alzheimer Research, 11(8):725–732, 2014.   doi
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L. K. Teune, R. J. Renken, B. M. de Jong and A. T. Willemsen, M. J. van Osch and J. B. T. M. Roerdink, and R. A. Dierckx and K. L. Leenders. Parkinson’s Disease-related perfusion and glucose metabolic brain patterns identified with PCASL-MRI and FDG-PET imaging. NeuroImage: Clinical, 5:240–244, 2014.   doi
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C. Hurter, S. Fabrikant, T. Klein, and A. Telea. Bundled Visualization of Dynamic Graph and Trail Data. IEEE TVCG, 20(8):1141–1157, 2014.   bib
R. Martins, D. Coimbra, R. Minghim, and A. Telea. Visual analysis of dimensionality reduction quality for parameterized projections. Computers & Graphics, 41:26–42, 2014.   bib
C. Hurter, S. Conversy, D. Gianazza, and A. Telea. Interactive image-based information visualization for aircraft trajectory analysis. Transportation Research Part C, 27(2):207–227, 2014.   bib
A. Sobiecki, A. Jalba, and A. Telea. Comparison of curve and surface skeletonization methods for voxel shapes. Pattern Recognition Letters, 47:147–156, 2014.   doi
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Baoquan Liu, Alexandru C. Telea, Jos B.T.M. Roerdink, Gordon J. Clapworthy, David Williams, Po Yang, Feng Dong, Valeriu Codreanu, and Alessandro Chiarini. Parallel Centerline Extraction on the GPU. Computers & Graphics, 41:72–83, 2014.   bib
Jasper J. van de Gronde and Jos B. T. M. Roerdink. Group-Invariant Colour Morphology Based on Frames. IEEE Transactions on Image Processing, 23(3):1276–1288, March 2014.   doi
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Jos Roerdink. Visualisation in Digital Science. Pan European Networks. Science & Technology, 9:116–117, December 2013.   url
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Jasper J. van de Gronde and Jos B. T. M. Roerdink. Frames, the Loewner order and eigendecomposition for morphological operators on tensor fields. Pattern Recognition Letters, 47:40–49, 2014.   doi
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J. Kustra, A. Jalba, and A. Telea. Robust Segmentation of Multiple Manifolds from Unoriented Noisy Point Clouds. Computer Graphics Forum, 33(1):73–87, 2014.   pdf
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Jos Roerdink. Connected Morphological Operators for Tensor Images. ERCIM NEWS, 95:32–33, October 2013. Special theme: Image Understanding.   url
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B. Broeksema, T. Baudel, A. Telea, and P. Crisafuli. Decision Exploration Lab: A visual analytics solution for Decision Management. IEEE TVCG (Proc. VAST), 19(12):1972–1981, 2013.   pdf
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B. Broeksema, A. Telea, and T. Baudel. Visual Analysis of Multidimensional Categorical Datasets. Computer Graphics Forum, 32(8):158–169, 2013.   pdf
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A. Telea, C. Goerg, and S. Reiss (eds.). Introduction to the special issue of selected papers from ACM SOFTVIS 2010. Information Visualization, 2013.   bib
A. Sobiecki, A. Jalba, and A. Telea. Qualitative and Quantitative Comparison of Curve and Surface Skeletons – A State of the Art Review. ICTOpen 2013, 2013.   pdf
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Andrei C. Jalba , Wladimir J. van der Laan, and Jos B. T. M. Roerdink. Fast Sparse Level-Sets on Graphics Hardware. IEEE Trans. Visualization and Computer Graphics, 19(1):30–44, 2013.   bib
L. K. Teune, R. J. Renken, D. Mudali and B. M. De Jong, R. A. Dierckx and J. B. T. M. Roerdink, and K. L. Leenders. Validation of parkinsonian disease-related metabolic brain patterns. Movement Disorders, 28(4):547–551, 2013.   doi
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Moritz Gerl and Tobias Isenberg. Interactive Example-based Hatching. Computers & Graphics, 37(1–2):65–80, February–April 2013.   doi
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Jan Eric Kyprianidis, John Collomosse, Tinghuai Wang, and Tobias Isenberg. State of the ‘Art’: A Taxonomy of Artistic Stylization Techniques for Images and Video. IEEE Transactions on Visualization and Computer Graphics, 19(5):866–885, May 2013.   doi
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Petra Isenberg, Tobias Isenberg, Tobias Hesselmann, Bongshin Lee, Ulrich von Zadow, and Anthony Tang. Data Visualization on Interactive Surfaces: A Research Agenda. IEEE Computer Graphics and Applications, 33(2):16–24, March/April 2013.   doi
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Tobias Isenberg. Visual Abstraction and Stylisation of Maps. The Cartographic Journal, 50(1):8–18, February 2013.   doi
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Radu Hobincu, Valeriu Codreanu, and Lucian Petrica. GNU Compiler Collection Backend Port For The Integral Parallel Architecture. UPB Scientific Bulletin, 74(3), 2012.   bib
André Sobiecki, Gilson A. Giraldi, Luiz A.P. Neves, and Carlos E. Thomaz. An Automatic Framework for Segmentation and Digital Inpainting of 2D Frontal Face Image. IEEE Latin America Transactions, 2012.   pdf
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Tsjerk A. Wassenaar, Sjoerd de Vries, Alexandre M.J.J. Bonvin, and Henk Bekker. SQUEEZE-E: The Optimal Solution for Molecular Simulations with Periodic Boundary Conditions. Journal of Chemical Theory and Computation, 8(10):3618–3627, 2012.   doi
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Andrei Jalba, Jacek Kustra, and Alexandru Telea. Surface and Curve Skeletonization of Large 3D Models on the GPU. IEEE Transactions of Pattern Analysis and Machine Intelligence, 35(6):1495–1508, 2013.   pdf
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Thomas Baudel and Bertjan Broeksema. Capturing the Design Space of Sequential Space-Filling Layouts. IEEE Transactions on Visualization and Computer Graphics, 18(12), November/December 2012. To appear.   pdf
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Lingyun Yu, Konstantinos Efstathiou, Petra Isenberg, and Tobias Isenberg. Efficient Structure-Aware Selection Techniques for 3D Point Cloud Visualizations with 2DOF Input. IEEE Transactions on Visualization and Computer Graphics, 18(12):2245–2254, November/December 2012. Honorable Mention Award at IEEE Scientific Visualization 2012.   doi
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Jo Wood, Petra Isenberg, Tobias Isenberg, Jason Dykes, Nadia Boukhelifa, and Aidan Slingsby. Sketchy Rendering for Information Visualization. IEEE Transactions on Visualization and Computer Graphics, 18(12):2749–2758, November/December 2012.   doi
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Nadia Boukhelifa, Anastasia Bezerianos, Tobias Isenberg, and Jean-Daniel Fekete. Evaluating Sketchiness as a Visual Variable for the Depiction of Qualitative Uncertainty. IEEE Transactions on Visualization and Computer Graphics, 18(12):2769–2778, November/December 2012.   doi
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Tobias Isenberg, Paul Asente, John Collomosse, and T. Metin Sezgin. Special Section on the 2011 Joint Symposium on Computational Aesthetics (CAe), Non-Photorealistic Animation and Rendering (NPAR), and Sketch-Based Interfaces and Modeling (SBIM). Computers & Graphics, 36(5), July 2012. To appear.   doi
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Jessie Kennedy and Jos B.T.M. Roerdink. Highlights of the 1st IEEE Symposium on Biological Data Visualization. BMC Bioinformatics, 13(Suppl 8):S1, 2012.   doi
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D. Reniers, L. Voinea, O. Ersoy, and A. Telea. The Solid* Toolset for Software Visual Analytics of Program Structure and Metrics Comprehension: From Research Prototype to Product. Science of Computer Programming, 2012. To appear.   doi
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Christophe Hurter, Ozan Ersoy, and Alexandru Telea. Graph Bundling by Kernel Density Estimation. Computer Graphics Forum, 31(3pt1):865–874, June 2012.   doi
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Tijmen Klein, Florimond Guéniat, Luc Pastur, Frédéric Vernier, and Tobias Isenberg. A Design Study of Direct-Touch Interaction for Exploratory 3D Flow Visualization. Computer Graphics Forum, 31(3):1225–1234, June 2012.   doi
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A. R. Offringa and J. J. van de Gronde and J. B. T. M. Roerdink. A morphological algorithm for improving radio-frequency interference detection. Astronomy & Astrophysics, 539(A95), March 2012.   doi
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Moritz Gerl, Peter Rautek, Tobias Isenberg, and M. Eduard Gröller. Semantics by Analogy for Illustrative Volume Visualization. Computers & Graphics, 36(2):201–213, 2012.   doi
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Tobias Isenberg and Douglas Cunningham. Event Report: Computational Aesthetics 2011. Computer Graphics Forum, 30(8):2457–2458, December 2011.   doi
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Evert-Jan Blom, Anja N. J. A. Ridder, Andrzej T. Lulko, Jos B. T. M. Roerdink, and Oscar P. Kuipers. Time-Resolved Transcriptomics and Bioinformatic Analyses Reveal Intrinsic Stress Responses during Batch Culture of \emphBacillus subtilis. PLoS ONE, 6(11):e27160, 11 2011.   doi
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Ozan Ersoy, Christophe Hurter, Fernando Paulovich, Gabriel Cantareira, and Alexandru Telea. Skeleton-based edge bundling for graph visualization. IEEE TVCG, 17(12):2364–2373, 2011.   pdf
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Christophe Hurter, Ozan Ersoy, and Alexandru Telea. MoleView: An Attribute and Structure-based Semantic Lens for Large Element-based Plots. IEEE TVCG, 17(12):2600–2609, 2011.   pdf
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Bilkis J. Ferdosi, Hugo Buddelmeijer, Scott Trager, Michael H. F. Wilkinson, and Jos B. T. M. Roerdink. Comparison of Density Estimation Methods for Astronomical Datasets. Astronomy & Astrophysics, 531:A114, 2011.   doi
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B.J. Ferdosi and J.B.T.M Roerdink. Visualizing High-Dimensional Structures by Dimension Ordering and Filtering using Subspace Analysis. Computer Graphics Forum, 30(3):1121–1130, May 2011.   pdf
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Matthew van der Zwan, Wouter Lueks, Henk Bekker, and Tobias Isenberg. Illustrative Molecular Visualization with Continuous Abstraction. Computer Graphics Forum, 30(3):683–690, May 2011.   doi
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Alessandro Crippa, Leonardo Cerliani, Luca Nanetti, and Jos B.T.M. Roerdink. Heuristics for connectivity-based brain parcellation of SMA/pre-SMA through force-directed graph layout. NeuroImage, 54(3):2176–2184, 2011.   url
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Alessandro Crippa, Natasha M. Maurits, and Jos B. T. M. Roerdink. Graph averaging as a means to compare multichannel EEG coherence networks and its application to the study of mental fatigue and neurodegenerative disease. Computers & Graphics, 35(2):265–274, 2011.   pdf
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Wladimir J. van der Laan, Andrei C. Jalba, and Jos B. T. M. Roerdink. Accelerating Wavelet Lifting on Graphics Hardware using CUDA. IEEE Transactions on Parallel and Distributed Systems, 22:132–146, 2011.   doi
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Wladimir J. van der Laan, Andrei C. Jalba, and Jos B. T. M. Roerdink. A Memory and Computation Efficient Sparse Level-Set Method. Journal of Scientific Computing, 46(2):243–264, 2011.   doi
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Domingo Martín, Germán Arroyo, M. Victoria Luzón, and Tobias Isenberg. Scale-Dependent and Example-Based Stippling. Computers & Graphics, 35(1):160–174, February 2011.   doi
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John Collomosse and Tobias Isenberg. Special Section on Non-Photorealistic Animation and Rendering (NPAR) 2010. Computers & Graphics, 35(1):iv–v, February 2011.   doi
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Tobias Isenberg and Neil Dodgson. Event Report: Computational Aesthetics 2010. Computer Graphics Forum, 29(6):2007, September 2010.   doi
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Michel A. Westenberg, Jos B.T.M. Roerdink and Oscar P. Kuipers, and Sacha A.F.T. van Hijum. SpotXplore: a Cytoscape plugin for visual exploration of hotspot expression in gene regulatory networks. Bioinformatics, 26(22):2922–2923, 2010.   bib
Lingyun Yu, Pjotr Svetachov, Petra Isenberg, Maarten H. Everts, and Tobias Isenberg. FI3D: Direct-Touch Interaction for the Exploration of 3D Scientific Visualization Spaces. IEEE Transactions on Visualization and Computer Graphics, 16(6):1613–1622, November/December 2010.   doi
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Alessandro Crippa, Cris P. Lanting, and Pim van Dijk and Jos B. T. M. Roerdink. A Diffusion Tensor Imaging Study on Auditory System and Tinnitus. The Open Neuroimaging Journal, 4:16–25, 2010.   doi
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Aexandru Telea, Lucian Voinea, and Hans Sassenburg. Visual Tools for Software Architecture Understanding: A Stakeholder Perspective. IEEE Software (special issue on Software Architecture: Framing Stakeholders’ Concerns, Nov/Dec 2010), 27(6):47–53, 2010.   bib
Alle Meije Wink and Jos B. T. M. Roerdink. Polyphase Decompositions and Shift-Invariant Discrete Wavelet Transforms in the Frequency Domain. Signal Processing, 90(6):1779–1787, June 2010.   doi
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Alexandru Telea and Ozan Ersoy. Image-Based Edge Bundles: Simplified Visualization of LargeGraphs. Computer Graphics Forum, 29(3):843–852, June 2010. Second Best Paper Award at EuroVis 2010.   doi
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Pjotr Svetachov, Maarten H. Everts, and Tobias Isenberg. DTI in Context: Illustrating Brain Fiber Tracts In Situ. Computer Graphics Forum, 29(3):1024–1032, June 2010.   doi
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Ronald van den Berg, Jos B. T. M. Roerdink, and Frans W. Cornelissen. A Neurophysiologically Plausible Population Code Model for Feature Integration Explains Visual Crowding. PLoS Comput Biol, 6(1):e1000646, January 2010.   doi
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Evert-Jan Blom, Jos B. T. M. Roerdink, Oscar P. Kuipers, and Sacha A. F. T. van Hijum. MOTIFATOR: detection and characterization of regulatory motifs using prokaryote transcriptome data. Bioinformatics, 25(4):550, 2009.   doi
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Henk Bekker, Axel A. Brink, and Jos B. T. M. Roerdink. Reducing the time complexity and identifying ill-posed problem instances of Minkowski sum based similarity calculations. International Journal of Computational Geometry and Applications, 19(5):441–456, October 2009.   doi
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Maarten H. Everts, Henk Bekker, Jos B.T.M. Roerdink, and Tobias Isenberg. Depth-Dependent Halos: Illustrative Rendering of Dense Line Data. IEEE Transactions on Visualization and Computer Graphics, 15(6):1299–1306, November/December 2009. Best Paper Award at IEEE Visualization 2009.   doi
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Zainab Meraj, Brian Wyvill, Tobias Isenberg, Amy Gooch, and Richard Guy. Automatically Mimicking Unique Hand-Drawn Pencil Lines. Computers & Graphics, 33(4):496–508, August 2009.   doi
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Alexandru Telea and Lucian Voinea. Visual Software Analytics for the Build Optimization of Large-Scale Software Systems. Computational Statistics, 2009. accepted.   bib
Lucian Voinea and Alexandru Telea. Visual Querying and Analysis of Large Software Repositories. Empirical Software Engineering, 14(3):316–340, 2009.   bib
Alexandru Telea. Introduction to the special issue of selected papers from SOFTVIS 2008. Information Visualization, 8(2):85–86, 2009.   doi
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Alexandru Telea, Heorhiy Byelas, and Lucian Voinea. A Framework for Reverse Engineering Large C++ Code Bases. Electronic Notes in Theoretical Computer Science (special issue on Proc. SQM 2008), 233:143–159, 2009.   doi
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Monicque M. Lorist, Eniko Bezdan, Michael ten Caat , Mark M. Span, Jos B. T. M. Roerdink, and Natasha M. Maurits. The influence of mental fatigue and motivation on task switching; an EEG coherence study. Brain Research, 1270:95–106, 2009.   pdf
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Christine C. Boucard, Aditya T. Hernowo, R. Paul Maguire, Nomdo M. Jansonius, Jos B.T.M. Roerdink , Johanna M.M. Hooymans, and Frans W. Cornelissen. Changes in cortical grey matter density associated with long-standing retinal visual field defects. Brain, 132(7):1898–1906, 2009.   bib
Ronald van den Berg, Frans W. Cornelissen, and Jos B. T. M. Roerdink. A Crowding Model of Visual Clutter. J. of Vision, 9(4):Article 24, 1–11, 2009.   doi
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Andrei C. Jalba and Jos B. T. M. Roerdink. Efficient Surface Reconstruction from Noisy Data using Regularized Membrane Potentials. IEEE Trans. Image Processing, 18(5):1119–1134, May 2009.   pdf
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Dennie Reniers and Alexandru Telea. Extreme Simplification and Rendering of Point Sets Using Algebraic Multigrid. Computing and Visualisation in Science, 12(1):9–23, 2009.   bib
David Williams, Sören Grimm, Ernesto Coto, Abdul Roudsari, and Haralambos Hatzakis. Volumetric Curved Planar Reformation for Virtual Endoscopy. IEEE Transactions on Visualization and Computer Graphics, 14(1):109–119, 2008.   bib
Evert-Jan Blom, R. Breitling, K. J. Hofstede and J. B. T. M. Roerdink, and S. A. F. T. van Hijum and O. P. Kuipers. Prosecutor: parameter-free inference of gene function for prokaryotes using DNA microarray data, genomic context and multiple gene annotation sources. BMC Genomics, 9:495, 2008.   bib
Evert-Jan Blom, Sacha A. F. T. van Hijum, Klaas J. Hofstede, Remko Silvis, and Jos B. T. M. Roerdink and Oscar P. Kuipers. DISCLOSE: DISsection of CLusters Obtained by SEries of transcriptome data using functional annotations and putative transcription factor binding sites. BMC Bioinformatics, 9:535, 2008.   bib
Wim H. Hesselink and Jos B. T. M. Roerdink. Euclidean skeletons of digital image and volume data in linear time by the integer medial axis transform. IEEE Trans. Pattern Analysis and Machine Intell., 30(12):2204–2217, December 2008.   pdf
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A. Telea, H. Byelas, and L. Voinea. Architecting an Open System for Querying Large C and C++ Code Bases. S. African Computer Journal, 41:43–56, December 2008.   url
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H. Byelas and A. Telea. Visual Software Analytics for Assessing the Maintainability of Object-Oriented Software Systems. J. of Information, Interaction and Intelligence, 8(1), 2008.   url
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Heorhiy Byelas and Alexandru Telea. Towards Visual Realism in Drawing Areas of Interest on Software Architecture Diagrams. J. of Visual Languages and Computing, 20(2):110–128, 2008.   bib
Dennie Reniers and Alexandru Telea. Part-type Segmentation of Articulated Voxel-Shapes using the Junction Rule. Computer Graphics Forum (Proc. Pacific Graphics’08), 27(7):1845–1852, 2008.   url
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Dennie Reniers and Alexandru Telea. Patch-type Segmentation of Voxel Shapes using Simplified Surface Skeletons. Computer Graphics Forum (Proc. Pacific Graphics’08), 27(7):1837–1844, 2008.   url
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Dennie Reniers and Alexandru Telea. Hierarchical Part-Type Segmentation using Voxel-Based Curve Skeletons. The Visual Computer, 24(6):383–395, 2008.   url
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Dennie Reniers, Jarke J. van Wijk, and Alexandru Telea. Computing Multiscale Curve and Surface Skeletons of Genus 0 Shapes using a Global Importance Measure. IEEE TVCG, 14(2):355–368, 2008.   url
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Michael ten Caat, Monicque M. Lorist, Eniko Bezdan , Jos B. T. M. Roerdink, and Natasha M. Maurits. High-Density EEG Coherence Analysis Using Functional Units Applied to Mental Fatigue. J. Neuroscience Methods, 171(2):271–278, 2008. http://dx.doi.org/10.1016/j.jneumeth.2008.03.022.   pdf
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Michael ten Caat, Natasha M. Maurits, and Jos B. T. M. Roerdink. Data-Driven Visualization and Group Analysis of Multichannel EEG Coherence with Functional Units. IEEE Trans. Visualization and Computer Graphics, 14(4):756–771, 2008.   pdf
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Alle Meije Wink, Hans Hoogduin, and Jos B. T. M. Roerdink. Data-driven haemodynamic response function extraction using Fourier-wavelet regularised deconvolution. BMC Medical Imaging, 8:7, 2008.   doi
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Alexandru Telea and David Auber. CodeFlows: Visualizing Structural Evolution of Source Code. Computer Graphics Forum (Proc. EuroVis’08), 27(3):271–278, 2008.   url
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Michel A. Westenberg, Sacha A. F. T. van Hijum and Oscar P. Kuipers, and Jos B. T. M. Roerdink. Visualizing Genome Expression and Regulatory Network Dynamics in Genomic and Metabolic Context. Computer Graphics Forum, 27(3):887–894, 2008.   doi
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Tobias Isenberg, Maarten H. Everts, and Jens Grubert and Sheelagh Carpendale. Interactive Exploratory Visualization of 2D Vector Fields. Computer Graphics Forum, 27(3):983–990, May 2008.   doi
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Ross Maciejewski, Tobias Isenberg, William M. Andrews, David S. Ebert, and Mario Costa Sousa and Wei Chen. Measuring Stipple Aesthetics in Hand-Drawn and Computer-Generated Images. Computer Graphics & Applications, 28(2):62–74, March/April 2008.   doi
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Ronald van den Berg, Frans W. Cornelissen, and Jos B. T. M. Roerdink. Perceptual Dependencies in Information Visualization Assessed by Complex Visual Search. ACM Transactions on Applied Perception, 4(4):1–21, 2008.   doi
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Ernesto Coto, Sören Grimm, and David Williams. O-Buffer Based IFT Watershed from Markers for Large Medical Datasets. Computer and Graphics, 31(6):848–863, 2007.   bib
Michael ten Caat, Natasha M. Maurits, and Jos B. T. M. Roerdink. Design and Evaluation of Tiled Parallel Coordinate Visualization of Multichannel EEG Data. IEEE Trans. Visualization and Computer Graphics, 13(1):70–79, 2007.   doi
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Evert-Jan Blom, Dinne W. J. Bosman, Sacha A. F. T. van Hijum, Rainer Breitling, Lars Tijsma , Remko Silvis, Jos B. T. M. Roerdink, and Oscar P. Kuipers. FIVA: Functional Information Viewer and Analyzer extracting biological knowledge from transcriptome data of prokaryotes. Bioinformatics, 23(9):1161–1163, 2007.   doi
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Erik R. Urbach, Jos B. T. M. Roerdink, and Michael H. F. Wilkinson. Connected Shape-Size Pattern Spectra for Rotation and Scale-Invariant Classification of Gray-Scale Images. IEEE Transactions on Pattern Analysis and Machine Intelligence, 29(2):272–285, 2007.   doi
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E.R. Urbach, J.B.T.M. Roerdink, and M.H.F. Wilkinson. Connected morphological operators improve image classification. SPIE Newsroom, 2007. http://dx.doi.org/10.1117/2.1200706.0699.   url
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Andrei C. Jalba and Jos B. T. M. Roerdink. Efficient surface reconstruction using generalized Coulomb potentials. IEEE Trans. Visualization and Computer Graphics, 13(6):1512–1519, 2007.   pdf
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Michel A. Westenberg, Jos B. T. M. Roerdink, and Michael H. F. Wilkinson. Volumetric attribute filtering and interactive visualization using the Max-Tree representation. IEEE Transactions on Image Processing, 16(2):2943–2952, 2007.   pdf Δ
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Ronald van den Berg, Jos B. T. M. Roerdink, and Frans W. Cornelissen. On the Generality of Crowding: Visual Crowding in Size, Saturation, and Hue Compared to Orientation. Journal of Vision, 7(2):1–11, 7 2007.   pdf
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Andrei C. Jalba, Michael H.F. Wilkinson, and Jos B. T. M. Roerdink. Shape representation and recognition through morphological curvature scale spaces. IEEE Trans. Image Processing, 15(2):331–341, February 2006.   pdf
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Aleksandra Pi\v{z}urica, Alle Meije Wink, Ewout Vansteenkiste, Wilfried Philips, and Jos B. T. M. Roerdink. A review of wavelet denoising in MRI and ultrasound brain imaging. Current Medical Imaging Reviews, 2(2):247–260, 2006.   pdf
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Alle Meije Wink and Jos B. T. M. Roerdink. BOLD Noise Assumptions in fMRI. International Journal of Biomedical Imaging, 2006:Article ID 12014, 11 pages, 2006.   doi
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Diederik W. J. Bosman, Evert-Jan Blom, Ogao, Patrick J., Oscar P. Kuipers, and Jos B. T. M. Roerdink. MOVE: A Multi-level Ontology-based Visualization and Exploration framework for genomic networks. In Silico Biology, 2006.   url
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Aave Hannus, Ronald van den Berg, Harold Bekkering , Jos B. T. M. Roerdink, and Frans W. Cornelissen. Visual Search Near Threshold: Some Features Are More Equal Than Others. Journal Vision, 6(4):523–540, 7 2006.   doi
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Lucian Muresan, Remco Renken, Jos B. T. M. Roerdink , and Hendrikus Duifhuis. Automated Correction of Spin-History Related Motion Artefacts in fMRI: Simulated and Phantom Data. IEEE Transactions on Biomedical Engineering, 52(8):1450–1460, 2005.   pdf
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Jos B. T. M. Roerdink. Morphological Pyramids in Multiresolution MIP Rendering of Large Volume Data: Survey and New Results. J. Math. Imag. Vision, 22(2/3):143–157, 2005.   pdf
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Andrei C. Jalba, Michael H. F. Wilkinson, Jos B. T. M. Roerdink, Micha M. Bayer, and Stephen Juggins. Automatic Diatom Identification using Contour Analysis by Morphological Curvature Scale Spaces. Machine Vision and Applications, 16(4):217–228, 2005.   pdf
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Michel A. Westenberg and Thomas Ertl. Denoising 2-D Vector Fields by Vector Wavelet Thresholding. Journal of WSCG, 13(1):33–40, 2005.   pdf Δ
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Andrei C. Jalba, Michael H.F. Wilkinson, and Jos B. T. M. Roerdink. Morphological hat-transform scale spaces and their use in pattern classification. Pattern Recognition, 37(5):901–915, 2004.   pdf
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Alle Meije Wink and Jos B. T. M. Roerdink. Denoising functional MR images: a comparison of wavelet denoising and Gaussian smoothing. IEEE Trans. Med. Imaging, 23(3):374–387, 2004.   pdf
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Andrei C. Jalba, Michael H.F. Wilkinson, and Jos B. T. M. Roerdink. CPM: A Deformable Model for Shape Recovery and Segmentation Based on Charged Particles. IEEE Trans. Pattern Anal. Machine Intell., 26(10):1320–1335, 2004.   pdf
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Andrei C. Jalba, Michael H.F. Wilkinson, and Jos B. T. M. Roerdink. Automatic segmentation of diatom images for classification. Microscopy Research and Technique, 65(1-2):72–85, September 2004.   pdf
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Cosmin Grigorescu, Nicolai Petkov, and Michel A. Westenberg. Contour and boundary detection improved by surround suppression of texture edges. Image and Vision Computing, 22(8):609–622, 2004.   pdf Δ
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Nicolai Petkov and Michel A. Westenberg. Band-limited noise suppresses contour perception not only of letters but of any objects. Perception, 33(suppl.):150b, 2004.   bib
Nicolai Petkov and Michel A. Westenberg. Non-classical receptive field inhibition and its relation to orientation-contrast pop-out and line and contour saliency: a computational approach. Perception, 33(suppl.):68b, 2004.   bib
Jos B. T. M. Roerdink. Multiresolution Maximum Intensity Volume Rendering by Morphological Adjunction Pyramids. IEEE Trans. Image Processing, 12(6):653–660, June 2003.   pdf
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Cosmin Grigorescu, Nicolai Petkov, and Michel A. Westenberg. Contour Detection Based on Nonclassical Receptive Field Inhibition. IEEE Trans. Image Processing, 12(7):729–739, 2003.   pdf Δ
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Cosmin Grigorescu, Nicolai Petkov, and Michel A. Westenberg. The role of non-CRF inhibition in contour detection. Journal of WSCG, 11(2):197–204, 2003.   pdf Δ
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Nicolai Petkov and Michel A. Westenberg. Suppression of Contour Perception by Band-Limited Noise and Its Relation to Non-Classical Receptive Field Inhibition. Biological Cybernetics, 88(3):236–246, 2003.   pdf Δ
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Nicolai Petkov, Michel A. Westenberg, and Cosmin Grigorescu. Non-classical receptive field inhibition and contour detection. Perception, 32(suppl.):1–2, 2003.   bib
Michel A. Westenberg and Jos B. T. M. Roerdink. An extension of Fourier-wavelet volume rendering by view interpolation. Journal of Mathematical Imaging and Vision, 14(2):103–115, 2001.   pdf Δ
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"A. V. Tuzikov and J. B. T. M. Roerdink and. "Similarity Measures for Convex Polyhedra Based on. Pattern Recognition, 33(6):979–995, 2000.   pdf
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J. B. T. M. Roerdink. Group morphology. Pattern Recognition, 33(6):877–895, 2000. Honorable Mention Winner of the 27-th Annual Pattern Recognition Society Award.   pdf
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J. B. T. M. Roerdink and A. Meijster. "The watershed transform: definitions. Fundamenta Informaticae, 41:187–228, 2000.   pdf
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Michel A. Westenberg and Jos B. T. M. Roerdink. Frequency Domain Volume Rendering by the Wavelet X-Ray Transform. IEEE Transactions on Image Processing, 9(7):1249–1261, 2000.   pdf Δ
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Michel A. Westenberg and Jos B. T. M. Roerdink. X-Ray Volume Rendering Through Two-Stage Splatting. Machine Graphics & Vision, 9(1/2):307–314, 2000. \emph{Best Paper Award GKPO’2000, 6th International Conference on Computer Graphics and Image Processing, May 15-19, 2000, Podlesice, Poland}.   pdf Δ
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Jos B. T. M. Roerdink and Michel A. Westenberg. Wavelet-Based Volume Visualization. Nieuw Archief voor Wiskunde, 17(2):149–158, 1999.   pdf
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Jos B. T. M. Roerdink and Michel A. Westenberg. Data-parallel tomographic reconstruction: A comparison of filtered backprojection and direct Fourier reconstruction. Parallel Computing, 24:2129–2142, 1998.   pdf Δ
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J. B. T. M. Roerdink. Computer vision and mathematical morphology. Computing, Supplement 11, 1996.   pdf
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J. B. T. M. Roerdink. FFT-based methods for nonlinear image restoration in confocal microscopy. J. Math. Imag. Vision, 4(2):199–207, 1994.   pdf
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A. -M. Neutel, J. B. T. M. Roerdink, and P. C. de Ruiter. Global stability of two-level detritus decomposer food chains. J. Theor. Biol., 171:351–353, 1994.   bib
J. B. T. M. Roerdink and M. Bakker. An FFT-based method for attenuation correction in fluorescence confocal microscopy. J. Microscopy, 169:3–14, 1993.   pdf
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J. B. T. M. Roerdink and M. Zwaan. Cardiac magnetic resonance imaging by retrospective gating: mathematical modelling and reconstruction algorithms. Euro. Jnl of Applied Mathematics, 4:241–270, 1993.   pdf
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J. B. T. M. Roerdink. Computerized tomography and its applications: a guided tour. Nieuw Archief voor Wiskunde, 10(3, November):277–308, 1992. Special Issue on Image Processing.   pdf
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(guest editor) Roerdink. Special Issue on Image Processing. Nieuw Archief voor Wiskunde, 10(3, November):155–326, 1992.   bib
J. B. T. M. Roerdink. A Markov chain identity and monotonicity of the diffusion constants for a random walk in a heterogeneous environment. Math. Proc. Camb. Phil. Soc., 108:111–126, 1990.   bib
J. B. T. M. Roerdink, K. E. Shuler, and G. F. Lawler. Diffusion in lattices with anisotropic scatterers. J. Statist. Phys., 59:23–52, 1990.   bib
J. Grasman and J. B. T. M. Roerdink. Stochastic and chaotic relaxation oscillations. J. Statist. Phys., 54:949–970, 1989.   bib
J. B. T. M. Roerdink. The biennial life strategy in a random environment. Supplement. J. Math. Biol., 27:309–319, 1989.   bib
J. B. T. M. Roerdink. Products of random matrices or ‘Why do biennials live longer than two years?’. CWI Quarterly, 2(1):37–44, 1989.   bib
J. B. T. M. Roerdink. The biennial life strategy in a random environment. J. Math. Biol., 26:199–215, 1988.   bib
J. B. T. M. Roerdink and H. J. A. M. Heijmans. Mathematical morphology for structures without translation symmetry. Signal Processing, 15:271–277, 1988.   bib
J. B. T. M. Roerdink. A note on the asymptotic properties of correlated random walks. J. Appl. Prob., 22:951–956, 1985.   bib
J. B. T. M. Roerdink. On the calculation of random walk properties from lattice bond enumeration. Physica, 132A:253–268, 1985.   bib
J. B. T. M. Roerdink and K. E. Shuler. Asymptotic properties of multistate random walks. I. Theory. J. Statist. Phys., 40:205–240, 1985.   bib
J. B. T. M. Roerdink and K. E. Shuler. Asymptotic properties of multistate random walks. II. Applications to inhomogeneous periodic and random lattices. J. Statist. Phys., 41:581–606, 1985.   bib
J. B. T. M. Roerdink. Some additional remarks on the cumulant expansion for linear stochastic differential equations. Physica, 123A:369–385, 1984.   bib
J. B. T. M. Roerdink. Approximate solution methods for linear stochastic difference equations I. Moments. Physica, 119A:455–484, 1983.   bib
J. B. T. M. Roerdink. Approximate solution methods for linear stochastic difference equations II. Inhomogeneous equations, multi-time averages, biological application. Physica, 120A:153–177, 1983.   bib
J. B. T. M. Roerdink. A cumulant expansion for the time correlation functions of solutions to linear stochastic differential equations. Physica, 112A:557–587, 1982.   bib
J. B. T. M. Roerdink and A. Weyland. A generalized Fokker-Planck equation in the case of the Volterra model. Bull. Math. Biol., 43:69–79, 1981.   bib
J. B. T. M. Roerdink. Inhomogeneous linear random differential equations with mutual correlations between multiplicative, additive and initial value terms. Physica, 109A:23–57, 1981.   bib