Scientific Visualization and Computer Graphics > CS > JBI > FWN > RUG

Publications by Jos B.T.M. Roerdink

2017

E. A., Valentijn, K., Begeman, A., Belikov, D. R., Boxhoorn, J. Brinchmann, H., Holties, K. H., Kuijken, G., Verdoes Kleijn, W-J. Vriend, J. B. T. M. Roerdink, M. A. Swertz, and G. J. W. van Dijk. Target and (Astro-)WISE technologies - Data federations and its applications. In Proceedings IAU Symposium No 135 Astroinformatics. Dec1, Dec1 2016. arXiv http://arxiv.org/abs/1612.05996.   bib
M. Biehl, D. Mudali, and K. L. Leenders and J. B. T. M. Roerdink. Classification of FDG-PET Brain Data by Generalized Matrix Relevance LVQ. In BrainComp 2015. Pages 131–141, 2016.   doi
bib
D. Mudali, M. Biehl, S. K. Meles and R. J. Renken, D. García-García, P. Clavero and J. Arbizu, J. A. Obeso, M. C. Rodriguez-Oroz and K. L. Leenders, and J. B. T.M. Roerdink. Differentiating Early and Late Stage Parkinson’s Disease Patients from Healthy Controls. Journal of Biomedical Engineering and Medical Imaging, 3(6), 2016.   doi
bib
D. Punzo, J. M. van der Hulst, and Roerdink, J. B. T. M.. Finding faint HI structure in and around galaxies: scraping the barrel. Astronomy and Computing, 17:163176, October 2016.   bib
P Yang, G Clapworthy, F Dong, Codreanu, VB, DP Williams, BQ Liu, JBTM Roerdink, and ZK Deng. GSWO: A Programming Model for GPU-enabled Parallelization of Sliding Window Operations in Image Processing. Signal Processing: Image Communication, 47:332345, 2016.   doi
bib
Venustiano Soancatl Aguilar, Jasper J. van de Gronde, Natasha M. Maurits, Claudine C. J. C. Lamoth, and Jos B. T. M. Roerdink. Curvature and Speed for Balance Quantification During Exergaming. In Proceedings of the 9th International Conference on Motion in Games. New York, NY, USA. ACM, pages 201–202, 2016.   doi
url
bib
Venustiano Soancatl Aguilar, J. J. and Lamoth van de Gronde, N. M. Maurits, and Roerdink, Jos B. T. M.. Visual Data Exploration for Balance Quantification During Exergaming. In EuroVis 2016 - Posters. Groningen. The Eurographics Association, pages 25–27, 2016.   doi
url
bib
Chengtao Ji, Jasper J. and Maurits van de Gronde, and Jos B. T. M. Roerdink. Tracking and Visualizing Dynamic Structures in Multichannel EEG Coherence Networks. In EuroVis 2016 - Posters. The Eurographics Association, pages 28–30, 2016.   doi
url
bib
Jasper J. van de Gronde, André R. Offringa, and Jos B. T. M. Roerdink. Efficient and Robust Path Openings using the Scale-Invariant Rank Operator. Journal of Mathematical Imaging and Vision, 56(3):455–471, 2016.   doi
pdf
url
bib
David Williams, Deborah Mudali, Hugo Buddelmeijer, Parisa Noorishad, Sanne Meles , Remco Renken, Nico Leenders, Edwin Valentijn, and Jos Roerdink. Visualization of Decision Tree State for the Classification of Parkinson’s Disease. Journal of Biomedical Engineering and Medical Imaging, 3(3):25, 2016.   doi
url
bib
Deborah Mudali, Michael Biehl, Klaus L. Leenders , and Jos B. T. M. Roerdink. LVQ and SVM Classification of FDG-PET Brain Data. In Advances in Self-Organizing Maps and Learning Vector Quantization, pages 205–215. . Springer International Publishing, 2016.   doi
bib
Herman Schubert, Jasper J. van de Gronde, and Jos B. T. M. Roerdink. Efficient Computation of Greyscale Path Openings. Mathematical Morphology - Theory and Applications, 1(1):189–202, 2016.   doi
pdf
url
bib
Jasper J. van de Gronde and Jos B. T. M. Roerdink. Generalized Morphology using Sponges. Mathematical Morphology - Theory and Applications, 1(1):18–41, 2016.   doi
pdf
url
bib

2016

E. A., Valentijn, K., Begeman, A., Belikov, D. R., Boxhoorn, J. Brinchmann, H., Holties, K. H., Kuijken, G., Verdoes Kleijn, W-J. Vriend, J. B. T. M. Roerdink, M. A. Swertz, and G. J. W. van Dijk. Target and (Astro-)WISE technologies - Data federations and its applications. In Proceedings IAU Symposium No 135 Astroinformatics. Dec1, Dec1 2016. arXiv http://arxiv.org/abs/1612.05996.   bib
M. Biehl, D. Mudali, and K. L. Leenders and J. B. T. M. Roerdink. Classification of FDG-PET Brain Data by Generalized Matrix Relevance LVQ. In BrainComp 2015. Pages 131–141, 2016.   doi
bib
D. Mudali, M. Biehl, S. K. Meles and R. J. Renken, D. García-García, P. Clavero and J. Arbizu, J. A. Obeso, M. C. Rodriguez-Oroz and K. L. Leenders, and J. B. T.M. Roerdink. Differentiating Early and Late Stage Parkinson’s Disease Patients from Healthy Controls. Journal of Biomedical Engineering and Medical Imaging, 3(6), 2016.   doi
bib
D. Punzo, J. M. van der Hulst, and Roerdink, J. B. T. M.. Finding faint HI structure in and around galaxies: scraping the barrel. Astronomy and Computing, 17:163176, October 2016.   bib
P Yang, G Clapworthy, F Dong, Codreanu, VB, DP Williams, BQ Liu, JBTM Roerdink, and ZK Deng. GSWO: A Programming Model for GPU-enabled Parallelization of Sliding Window Operations in Image Processing. Signal Processing: Image Communication, 47:332345, 2016.   doi
bib
Venustiano Soancatl Aguilar, Jasper J. van de Gronde, Natasha M. Maurits, Claudine C. J. C. Lamoth, and Jos B. T. M. Roerdink. Curvature and Speed for Balance Quantification During Exergaming. In Proceedings of the 9th International Conference on Motion in Games. New York, NY, USA. ACM, pages 201–202, 2016.   doi
url
bib
Venustiano Soancatl Aguilar, J. J. and Lamoth van de Gronde, N. M. Maurits, and Roerdink, Jos B. T. M.. Visual Data Exploration for Balance Quantification During Exergaming. In EuroVis 2016 - Posters. Groningen. The Eurographics Association, pages 25–27, 2016.   doi
url
bib
Chengtao Ji, Jasper J. and Maurits van de Gronde, and Jos B. T. M. Roerdink. Tracking and Visualizing Dynamic Structures in Multichannel EEG Coherence Networks. In EuroVis 2016 - Posters. The Eurographics Association, pages 28–30, 2016.   doi
url
bib
Jasper J. van de Gronde, André R. Offringa, and Jos B. T. M. Roerdink. Efficient and Robust Path Openings using the Scale-Invariant Rank Operator. Journal of Mathematical Imaging and Vision, 56(3):455–471, 2016.   doi
pdf
url
bib
David Williams, Deborah Mudali, Hugo Buddelmeijer, Parisa Noorishad, Sanne Meles , Remco Renken, Nico Leenders, Edwin Valentijn, and Jos Roerdink. Visualization of Decision Tree State for the Classification of Parkinson’s Disease. Journal of Biomedical Engineering and Medical Imaging, 3(3):25, 2016.   doi
url
bib
Deborah Mudali, Michael Biehl, Klaus L. Leenders , and Jos B. T. M. Roerdink. LVQ and SVM Classification of FDG-PET Brain Data. In Advances in Self-Organizing Maps and Learning Vector Quantization, pages 205–215. . Springer International Publishing, 2016.   doi
bib
Herman Schubert, Jasper J. van de Gronde, and Jos B. T. M. Roerdink. Efficient Computation of Greyscale Path Openings. Mathematical Morphology - Theory and Applications, 1(1):189–202, 2016.   doi
pdf
url
bib
Jasper J. van de Gronde and Jos B. T. M. Roerdink. Generalized Morphology using Sponges. Mathematical Morphology - Theory and Applications, 1(1):18–41, 2016.   doi
pdf
url
bib

2015

Mike van Diest, Jan Stegenga, Heinrich J. Wörtche, Jos B. T. M. Roerdink, Gijsbertus J. Verkerke, and Claudine J. C. Lamoth. Quantifying Postural Control during Exergaming Using Multivariate Whole-Body Movement Data: A Self-Organizing Maps Approach. PLoS ONE, 10(7):e0134350, 2015.   doi
bib
D. Mudali, L. K. Teune, R. J. Renken and K. L. Leenders, and J. B. T. M. Roerdink. Classification of Parkinsonian Syndromes from FDG-PET Brain Data Using Decision Trees with SSM/PCA Features. Computational and Mathematical Methods in Medicine, Article ID 136921:1–10, 2015.   url
bib
Maarten H. Everts, Henk Bekker, Jos B. T. M. Roerdink, and Tobias Isenberg. Interactive Illustrative Line Styles and Line Style Transfer Functions for Flow Visualization. Technical report 1503.05787, arXiv.org, March 2015. Extended version of a short paper at Pacific Graphics 2011, http://dx.doi.org/10.2312/PE/PG/PG2011short/105-110.   pdf
url
url
bib
Jasper J. van de Gronde and Jos B. T. M. Roerdink. Sponges for Generalized Morphology. In J\’on Atli Benediktsson, Jocelyn Chanussot, Laurent Najman, and Hugues Talbot, eds., Mathematical Morphology and Its Applications to Signal and Image Processing. Springer International Publishing, pages 351–362, 2015.   doi
pdf
bib
Jasper J. van de Gronde, Herman R. Schubert, and Jos B. T. M. Roerdink. Fast Computation of Greyscale Path Openings. In J\’on Atli Benediktsson, Jocelyn Chanussot, Laurent Najman, and Hugues Talbot, eds., Mathematical Morphology and Its Applications to Signal and Image Processing. Springer International Publishing, pages 621–632, 2015.   doi
pdf
url
bib
Maarten H. Everts, Eric Begue, Henk Bekker and Jos B. T. M. Roerdink, and Tobias Isenberg. Exploration of the Brain’s White Matter Structure through Visual Abstraction and Multi-Scale Local Fiber Tract Contraction. IEEE Transactions on Visualization and Computer Graphics, 21(7):808–821, 2015.   doi
bib
Andrei C. Jalba, Michel A. Westenberg, and Jos B. T. M. Roerdink. Interactive Segmentation and Visualization of DTI Data Using a Hierarchical Watershed Representation. IEEE Transactions on Image Processing, 24(3):1025–1035, March 2015.   bib
Jasper J. van de Gronde, Mikola Lysenko, and Jos B. T. M. Roerdink. Path-Based Mathematical Morphology on Tensor Fields. In Ingrid Hotz and Thomas Schultz, eds., Visualization and Processing of Higher Order Descriptors for Multi-Valued Data. Springer International Publishing, pages 109–127, 2015.   doi
url
bib

2014

Valeriu Codreanu, Bob Dröge, David Williams, Burhan Yasar, Po Yang, Baoquan and Dong Liu, Olarik Surinta, Schomaker, Lambert R.B., Jos B.T.M. Roerdink, and Wiering, Marco A.. Evaluating automatically parallelized versions of the support vector machine. Concurrency and Computation: Practice and Experience, 2014.   doi
url
bib
Laura K. Teune, Fijanne Strijkert, Remco J. Renken, Gerbrand J. Izaks, Jeroen J. de Vries, Marcel Segbers, Jos B.T.M. Roerdink , Rudi A.J.O. Dierckx, and Klaus L. Leenders. The Alzheimer’s disease-related glucose metabolic brain pattern. Current Alzheimer Research, 11(8):725–732, 2014.   doi
bib
L. K. Teune, R. J. Renken, B. M. de Jong and A. T. Willemsen, M. J. van Osch and J. B. T. M. Roerdink, and R. A. Dierckx and K. L. Leenders. Parkinson’s Disease-related perfusion and glucose metabolic brain patterns identified with PCASL-MRI and FDG-PET imaging. NeuroImage: Clinical, 5:240–244, 2014.   doi
bib
D. Mudali, L. K. Teune, R. J. Renken and K. L. Leenders, and Jos B. T. M. Roerdink. Comparison of dedison tree and stepwise regression methods in classification of FDG-PET data. In Third European Conference on Clinical Neuroimaging, March 31-April 1, Lille, France. Page 16, 2014. Abstract.   bib
Baoquan Liu, Alexandru C. Telea, Jos B.T.M. Roerdink, Gordon J. Clapworthy, David Williams, Po Yang, Feng Dong, Valeriu Codreanu, and Alessandro Chiarini. Parallel Centerline Extraction on the GPU. Computers & Graphics, 41:72–83, 2014.   bib
Jasper J. van de Gronde and Jos B. T. M. Roerdink. Group-Invariant Colour Morphology Based on Frames. IEEE Transactions on Image Processing, 23(3):1276–1288, March 2014.   doi
pdf
url
bib
Hugo Buddelmeijer, Parisa Noorishad, David Williams, Milena Ivanova, Jos B. T. M. Roerdink, and Edwin A. Valentijn. Analyzing Living Surveys: Visualization beyond the Data Release. In ADASS XXIV (Astronomical Data Analysis Software & Systems), 5-9 October, Calgary. 2014. Abstract.   bib
Hanspeter Pfister, Verena Kaynig, Charl P. Botha, Stefan Bruckner, Vincent J. Dercksen, Hans-Christian Hege, and Jos B. T. M. Roerdink. Visualization in Connectomics. In Scientific Visualization: Uncertainty, Multifield, Biomedical, and Scalable Visualization, pages 221–245. . Springer, 2014.   doi
bib
Jasper J. van de Gronde and Jos B. T. M. Roerdink. Frames, the Loewner order and eigendecomposition for morphological operators on tensor fields. Pattern Recognition Letters, 47:40–49, 2014.   doi
pdf
url
bib
David Williams, Valeriu Codreanu, Po Yang, Baoquan Liu, Feng Dong, Burhan Yasar, Babak Mahdian, Alessandro Chiarini, Xia Zhao, and Jos B.T.M. Roerdink. Evaluation of autoparallelization toolkits for commodity GPUs. In Parallel Processing and Applied Mathematics. Springer, pages 447–457, 2014.   pdf
url
bib

2013

Jos Roerdink. Visualisation in Digital Science. Pan European Networks. Science & Technology, 9:116–117, December 2013.   url
bib
Jasper J. van de Gronde, Michael H. F. Wilkinson, and Jos B. T. M. Roerdink. Rotation-invariant morphological filtering of tensor fields using frames. In Poster session of the National ICT.OPEN (Eindhoven). November, November 2013.   pdf
bib
Jasper J. van de Gronde and Jos B. T. M. Roerdink. Group-Invariant Frames for Colour Morphology. In ASCI.OPEN (Eindhoven). November, November 2013.   bib
Jos Roerdink. Connected Morphological Operators for Tensor Images. ERCIM NEWS, 95:32–33, October 2013. Special theme: Image Understanding.   url
bib
Valeriu Codreanu, Feng Dong, Baoquan Liu, Jos B.T.M. Roerdink, David Williams, Po Yang, and Burhan Yasar. GPU-ASIFT: A Fast Fully Affine-Invariant Feature Extraction Algorithm. In International Conference on High Performance Computing & Simulation 2013, July 1-5, Helsinki, Finland. IEEE, pages 474–481, 2013. Outstanding Paper Runner-up Award at HPCS 2013.   bib
Jasper J. van de Gronde and Jos B. T. M. Roerdink. Frames for Tensor Field Morphology. In Frank Nielsen and Frédéric Barbaresco, eds., Geometric Science of Information. Springer Berlin Heidelberg, pages 527–534, 2013.   doi
pdf
url
bib
Jasper J. van de Gronde and Jos B. T. M. Roerdink. Group-Invariant Frames for Colour Morphology. In Cris L. Luengo Hendriks, Gunilla Borgefors, and Robin Strand, eds., Mathematical Morphology and Its Applications to Signal and Image Processing. Springer Berlin Heidelberg, pages 267–278, 2013.   doi
pdf
url
bib
Andrei C. Jalba , Wladimir J. van der Laan, and Jos B. T. M. Roerdink. Fast Sparse Level-Sets on Graphics Hardware. IEEE Trans. Visualization and Computer Graphics, 19(1):30–44, 2013.   bib
L. K. Teune, R. J. Renken, D. Mudali and B. M. De Jong, R. A. Dierckx and J. B. T. M. Roerdink, and K. L. Leenders. Validation of parkinsonian disease-related metabolic brain patterns. Movement Disorders, 28(4):547–551, 2013.   doi
bib
David Williams, Valeriu Codreanu, Jos B.T.M. Roerdink, Po Yang, Baoquan Liu, Feng Dong, and Alessandro Chiarini. Accelerating Colonic Polyp Detection Using Commodity Graphics Hardware. In Proceedings of the International Conference on Computer Medical Applications. Sousse, Tunisia, pages 1–6, 2013.   doi
pdf
bib

2012

Valeriu Codreanu, David Williams, and Jos B.T.M. Roerdink. A General Toolkit for “GPUtilisation” in SME Applications. In Poster session of the National ICT.OPEN (Rotterdam). October, October 2012.   pdf
bib
Dirk Zittersteyn, Henk Bekker, and Jos B.T.M. Roerdink. Abstracted Visualization of White Matter Structure with Resampled Weighted Tracts. In Poster session of the National ICT.OPEN (Rotterdam). October, October 2012.   pdf
bib
Jasper J. van de Gronde, Michael H.F. Wilkinson, and Jos B.T.M. Roerdink. Making computers see tensors using mathematical morphology. In Poster session of the National ICT.OPEN (Rotterdam). October, October 2012.   pdf
bib
Jessie Kennedy and Jos B.T.M. Roerdink. Highlights of the 1st IEEE Symposium on Biological Data Visualization. BMC Bioinformatics, 13(Suppl 8):S1, 2012.   doi
url
bib
L. K. Teune, D. Mudali, R. J. Renken and B. M. De Jong, M. Segbers, J. B. T. M. Roerdink , R. A. Dierckx, and K. L. Leenders. Glucose IMaging in ParkinsonismS. In 16th International Congress of Parkinson’s Disease and Movement Disorders, Dublin, Ireland June 17-21. 2012. Abstract # 783.   bib
Alessandro Crippa, Andrei C. Jalba, and Jos B. T. M. Roerdink. Enhanced DTI tracking with Adaptive Tensor Interpolation. In Lars Linsen, Hans Hagen, and Bernd Hamann and Hans-Christian Hege, eds., Visualization in Medicine and Life Sciences II. Progress and New Challenges. Springer, pages 175–192, 2012.   pdf
bib
A. R. Offringa and J. J. van de Gronde and J. B. T. M. Roerdink. A morphological algorithm for improving radio-frequency interference detection. Astronomy & Astrophysics, 539(A95), March 2012.   doi
bib

2011

Maarten H. Everts, Roel W. C. P. Verstappen, Henk Bekker, Jos B. T. M. Roerdink, and Tobias Isenberg. Visualizing Streamlines using Depth-Dependent Halos. In Posters of the 64th Annual Meeting of the American Physical Society’s Division of Fluid Dynamics (November 20–22, 2011, Baltimore, USA). 2011. Poster.   pdf
url
bib
Maarten H. Everts, Henk Bekker, Jos B. T. M. Roerdink, and Tobias Isenberg. Flow Visualization using Illustrative Line Styles. In Proceedings of ICT.Open, ASCI – IPA – SIKS tracks, November 14–15, Veldhoven, The Netherlands). 2011. Paper number 33. Nominated for Best Paper.   pdf
url
bib
Evert-Jan Blom, Anja N. J. A. Ridder, Andrzej T. Lulko, Jos B. T. M. Roerdink, and Oscar P. Kuipers. Time-Resolved Transcriptomics and Bioinformatic Analyses Reveal Intrinsic Stress Responses during Batch Culture of \emphBacillus subtilis. PLoS ONE, 6(11):e27160, 11 2011.   doi
url
bib
Maarten H. Everts, Henk Bekker, Jos B. T. M. Roerdink, and Tobias Isenberg. Illustrative Line Styles for Flow Visualization. In Short Paper Proceedings of the 19th Pacific Conference on Computer Graphics and Applications (Pacific Graphics 2011, September 21–23, 2011, Kaohsiung, Taiwan). Goslar, Germany. Eurographics Association, pages 105–110, 2011. Short paper.   doi
pdf
url
bib
Alessandro Crippa and Jos B. T. M. Roerdink. Data-Driven Visualization of Functional Brain Regions from Resting State fMRI Data. In Peter Eisert, Konrad Polthier, and Joachim Hornegger, eds., Proceedings Vision, Modeling and Visualization Workshop (VMV), 4-6 Oct, Berlin. 2011.   pdf
bib
Jos B. T. M. Roerdink. Mathematical Morphology in Computer Graphics, Scientific Visualization and Visual Exploration. In P. Soille, M. Pesaresi, and G.K. Ouzounis, eds., Proc. 10th International Symposium on Mathematical Morphology (ISMM 2011), Intra, Lake Maggiore, Italy. July6-8. Springer, pages 367–380, July6-8 2011.   pdf
bib
Bilkis J. Ferdosi, Hugo Buddelmeijer, Scott Trager, Michael H. F. Wilkinson, and Jos B. T. M. Roerdink. Comparison of Density Estimation Methods for Astronomical Datasets. Astronomy & Astrophysics, 531:A114, 2011.   doi
bib
B.J. Ferdosi and J.B.T.M Roerdink. Visualizing High-Dimensional Structures by Dimension Ordering and Filtering using Subspace Analysis. Computer Graphics Forum, 30(3):1121–1130, May 2011.   pdf
bib
Alessandro Crippa, Leonardo Cerliani, Luca Nanetti, and Jos B.T.M. Roerdink. Heuristics for connectivity-based brain parcellation of SMA/pre-SMA through force-directed graph layout. NeuroImage, 54(3):2176–2184, 2011.   url
bib
Alessandro Crippa, Natasha M. Maurits, and Jos B. T. M. Roerdink. Graph averaging as a means to compare multichannel EEG coherence networks and its application to the study of mental fatigue and neurodegenerative disease. Computers & Graphics, 35(2):265–274, 2011.   pdf
bib
Wladimir J. van der Laan, Andrei C. Jalba, and Jos B. T. M. Roerdink. Accelerating Wavelet Lifting on Graphics Hardware using CUDA. IEEE Transactions on Parallel and Distributed Systems, 22:132–146, 2011.   doi
pdf
bib
Wladimir J. van der Laan, Andrei C. Jalba, and Jos B. T. M. Roerdink. A Memory and Computation Efficient Sparse Level-Set Method. Journal of Scientific Computing, 46(2):243–264, 2011.   doi
bib

2010

Jarke van Wijk, Tobias Isenberg, Jos B. T. M. Roerdink, Alexandru C. Telea, and Michel Westenberg. Evaluation. In Daniel Keim, Jörn Kohlhammer, Geoffrey Ellis, and Florian Mansmann, eds., Mastering The Information Age: Solving Problems with Visual Analytics. Goslar, Germany. Eurographics Association, pages 131–143, 2010.   url
url
bib
Michael Wilkinson, Erik Urbach, Andrei Jalba, and Jos Roerdink. Diatom identification with mathematical morphology. In Laurent Najman and Hugues Talbot, eds., Mathematical Morphology. ISTE Ltd, John Wiley & Sons, pages 357–365, 2010.   bib
Michael Wilkinson, Erik Urbach, Andrei Jalba, and Jos Roerdink. Identification de diatomées par morphologie mathématique. In Hugues Talbot and Laurent Najman, eds., Morphologie Mathématique 2: estimation, choix et mise en oeuvre. Hermes Science, pages 183–192, 2010.   bib
Michel A. Westenberg, Jos B.T.M. Roerdink and Oscar P. Kuipers, and Sacha A.F.T. van Hijum. SpotXplore: a Cytoscape plugin for visual exploration of hotspot expression in gene regulatory networks. Bioinformatics, 26(22):2922–2923, 2010.   bib
Bilkis J. Ferdosi, Hugo Buddelmeijer, Scott Trager, Michael H.F. Wilkinson, and Jos B.T.M. Roerdink. Finding and Visualizing Relevant Subspaces for ClusteringHigh-Dimensional Astronomical Data using Connected Morphological Operators. In Proceedings of IEEE Conference on Visual Analytics Science and Technology (IEEE VAST), October 2010. Pages 35–42, 2010.   pdf
bib
Maarten H. Everts, Henk Bekker, Jos B. T. M. Roerdink, and Tobias Isenberg. Illustrative Rendering of Dense Line Data. In Proceedings of the Sixteenth Annual Conference of the Advanced School for Computing and Imaging (ASCI CONFERENCE 2010, November 1–3, 2010, Veldhoven, The Netherlands). 2010. Paper number 13.   url
bib
Alessandro Crippa, Cris P. Lanting, and Pim van Dijk and Jos B. T. M. Roerdink. A Diffusion Tensor Imaging Study on Auditory System and Tinnitus. The Open Neuroimaging Journal, 4:16–25, 2010.   doi
url
bib
Alessandro Crippa, Natasha M. Maurits, and Jos B. T. M. Roerdink. Graph Averaging as a Means to Compare Multichannel EEG Coherence Networks. In Dirk Bartz, Charl Botha, Joachim Hornegger, Raghu Machiraju, Alexander Wiebel, and Bernhard Preim, eds., Eurographics Workshop on Visual Computing for Biology and Medicine. Leipzig, Germany. Eurographics Association, pages 33–40, 2010.   doi
pdf
bib
Alle Meije Wink and Jos B. T. M. Roerdink. Polyphase Decompositions and Shift-Invariant Discrete Wavelet Transforms in the Frequency Domain. Signal Processing, 90(6):1779–1787, June 2010.   doi
bib
Ronald van den Berg, Jos B. T. M. Roerdink, and Frans W. Cornelissen. A Neurophysiologically Plausible Population Code Model for Feature Integration Explains Visual Crowding. PLoS Comput Biol, 6(1):e1000646, January 2010.   doi
bib

2009

Jos B. T. M. Roerdink. Adaptivity and group invariance in mathematical morphology. In Proc. ICIP’2009 (Int. Conf. Image Processing), Cairo, Egypt, Nov. 7-10. Pages 2253–2256, 2009.   doi
pdf
bib
Evert-Jan Blom, Jos B. T. M. Roerdink, Oscar P. Kuipers, and Sacha A. F. T. van Hijum. MOTIFATOR: detection and characterization of regulatory motifs using prokaryote transcriptome data. Bioinformatics, 25(4):550, 2009.   doi
bib
Henk Bekker, Axel A. Brink, and Jos B. T. M. Roerdink. Reducing the time complexity and identifying ill-posed problem instances of Minkowski sum based similarity calculations. International Journal of Computational Geometry and Applications, 19(5):441–456, October 2009.   doi
pdf
bib
B.J. Ferdosi, H. Buddelmeijer, A. Helmi, S.C. Trager, E.A. Valentijn, M.H.F. Wilkinson, J.M. van der Hulst, and J.B.T.M. Roerdink. Comparison of Density Estimation Methods for Astronomical Datasets. In SIREN: Scientific ICT Research Event Netherlands, November 5, 2009, University of Twente. 2009. Poster.   pdf
bib
Maarten H. Everts, Henk Bekker, Jos B.T.M. Roerdink, and Tobias Isenberg. Depth-Dependent Halos: Illustrative Rendering of Dense Line Data. IEEE Transactions on Visualization and Computer Graphics, 15(6):1299–1306, November/December 2009. Best Paper Award at IEEE Visualization 2009.   doi
pdf
video
url
bib
Maarten H. Everts, Henk Bekker, Jos B.T.M. Roerdink, and Tobias Isenberg. Illustrative Rendering of Dense Line Data using Depth-Dependent Halos. In SIREN: Scientific ICT Research Event Netherlands, (November 5, 2009, University of Twente, The Netherlands). 2009. Poster. Best Poster Award at SIREN 2009.   pdf
video
bib
Wladimir J. van der Laan, Andrei C. Jalba, and Jos B.T.M. Roerdink. Accelerating Wavelet-Based Video Coding on Graphics Hardware using CUDA. In Peter Zinterhof, Sven Lončarić, Andreas Uhl, and Alberto Carini, eds., Proc. 6th International Symposium on Image and Signal Processing and Analysis (ISPA 2009, September 16–18, Salzburg, Austria). Pages 614–619, 2009.   pdf
bib
Maarten H. Everts, Henk Bekker, and Jos B.T.M. Roerdink. Visualizing White Matter Structure of the Brain using Dijkstra’s Algorithm. In Peter Zinterhof, Sven Lončarić, Andreas Uhl, and Alberto Carini, eds., Proc. 6th International Symposium on Image and Signal Processing and Analysis (ISPA 2009, September 16–18, Salzburg, Austria). Pages 575–580, 2009.   pdf
bib
A. C. Jalba and J. B. T. M. Roerdink. An efficient morphological active surface model for volumetric image segmentation. In M. H. F. Wilkinson and J. B. T. M. Roerdink, eds., Proc. 9th International Symposium on Mathematical Morphology and its Application to Signal and Image processing, Groningen. Aug24-27, pages 193–204, Aug24-27 2009.   pdf
url
bib
Monicque M. Lorist, Eniko Bezdan, Michael ten Caat , Mark M. Span, Jos B. T. M. Roerdink, and Natasha M. Maurits. The influence of mental fatigue and motivation on task switching; an EEG coherence study. Brain Research, 1270:95–106, 2009.   pdf
bib
Christine C. Boucard, Aditya T. Hernowo, R. Paul Maguire, Nomdo M. Jansonius, Jos B.T.M. Roerdink , Johanna M.M. Hooymans, and Frans W. Cornelissen. Changes in cortical grey matter density associated with long-standing retinal visual field defects. Brain, 132(7):1898–1906, 2009.   bib
Ronald van den Berg, Frans W. Cornelissen, and Jos B. T. M. Roerdink. A Crowding Model of Visual Clutter. J. of Vision, 9(4):Article 24, 1–11, 2009.   doi
bib
Andrei C. Jalba and Jos B. T. M. Roerdink. Efficient Surface Reconstruction from Noisy Data using Regularized Membrane Potentials. IEEE Trans. Image Processing, 18(5):1119–1134, May 2009.   pdf
bib
Michael ten Caat, Natasha M. Maurits, and Jos B.T.M. Roerdink. Data-Driven Visualization and Group Analysis of Multichannel EEG Coherence with Functional Units. In Proc. NeuroMath Workshop, Leuven, March 12-13. 2009. Abstract and poster.   bib
Alessandro Crippa, Andrei C. Jalba, and Jos B.T.M. Roerdink. Enhancing DTI tractography with adaptive diffusion tensor interpolation. In Proc. NeuroMath Workshop, Leuven, March 12-13. 2009. Abstract and poster.   bib

2008

Evert-Jan Blom, R. Breitling, K. J. Hofstede and J. B. T. M. Roerdink, and S. A. F. T. van Hijum and O. P. Kuipers. Prosecutor: parameter-free inference of gene function for prokaryotes using DNA microarray data, genomic context and multiple gene annotation sources. BMC Genomics, 9:495, 2008.   bib
Evert-Jan Blom, Sacha A. F. T. van Hijum, Klaas J. Hofstede, Remko Silvis, and Jos B. T. M. Roerdink and Oscar P. Kuipers. DISCLOSE: DISsection of CLusters Obtained by SEries of transcriptome data using functional annotations and putative transcription factor binding sites. BMC Bioinformatics, 9:535, 2008.   bib
Wim H. Hesselink and Jos B. T. M. Roerdink. Euclidean skeletons of digital image and volume data in linear time by the integer medial axis transform. IEEE Trans. Pattern Analysis and Machine Intell., 30(12):2204–2217, December 2008.   pdf
bib
Michael ten Caat, Monicque M. Lorist, Eniko Bezdan , Jos B. T. M. Roerdink, and Natasha M. Maurits. High-Density EEG Coherence Analysis Using Functional Units Applied to Mental Fatigue. J. Neuroscience Methods, 171(2):271–278, 2008. http://dx.doi.org/10.1016/j.jneumeth.2008.03.022.   pdf
bib
Michael ten Caat, Natasha M. Maurits, and Jos B. T. M. Roerdink. Data-Driven Visualization and Group Analysis of Multichannel EEG Coherence with Functional Units. IEEE Trans. Visualization and Computer Graphics, 14(4):756–771, 2008.   pdf
bib
Alle Meije Wink, Hans Hoogduin, and Jos B. T. M. Roerdink. Data-driven haemodynamic response function extraction using Fourier-wavelet regularised deconvolution. BMC Medical Imaging, 8:7, 2008.   doi
url
bib
Maarten H. Everts, Henk Bekker, and Jos B.T.M. Roerdink. Graph Algorithms for Fast Preview of Global Brain White Matter Structure. In SIREN: Scientific ICT Research Event Netherlands, 29 September 2008, VU Amsterdam. 2008. Poster.   pdf
bib
Michel A. Westenberg, Sacha A. F. T. van Hijum and Oscar P. Kuipers, and Jos B. T. M. Roerdink. Visualizing Genome Expression and Regulatory Network Dynamics in Genomic and Metabolic Context. Computer Graphics Forum, 27(3):887–894, 2008.   doi
pdf
bib
Ronald van den Berg, Frans W. Cornelissen, and Jos B. T. M. Roerdink. Perceptual Dependencies in Information Visualization Assessed by Complex Visual Search. ACM Transactions on Applied Perception, 4(4):1–21, 2008.   doi
pdf
bib
B.J. Ferdosi, H. Buddelmeijer, A. Helmi, S.C. Trager, E.A. Valentijn, M.H.F. Wilkinson, J.M. van der Hulst, and J.B.T.M. Roerdink. Visualizing Astronomical Data. In SIREN: Scientific ICT Research Event Netherlands, September 29, 2008, VU University Amsterdam. 2008. Poster.   pdf Δ
bib

2007

Michael ten Caat, Natasha M. Maurits, and Jos B. T. M. Roerdink. Design and Evaluation of Tiled Parallel Coordinate Visualization of Multichannel EEG Data. IEEE Trans. Visualization and Computer Graphics, 13(1):70–79, 2007.   doi
pdf
bib
Evert-Jan Blom, Dinne W. J. Bosman, Sacha A. F. T. van Hijum, Rainer Breitling, Lars Tijsma , Remko Silvis, Jos B. T. M. Roerdink, and Oscar P. Kuipers. FIVA: Functional Information Viewer and Analyzer extracting biological knowledge from transcriptome data of prokaryotes. Bioinformatics, 23(9):1161–1163, 2007.   doi
url
bib
Erik R. Urbach, Jos B. T. M. Roerdink, and Michael H. F. Wilkinson. Connected Shape-Size Pattern Spectra for Rotation and Scale-Invariant Classification of Gray-Scale Images. IEEE Transactions on Pattern Analysis and Machine Intelligence, 29(2):272–285, 2007.   doi
pdf
bib
E.R. Urbach, J.B.T.M. Roerdink, and M.H.F. Wilkinson. Connected morphological operators improve image classification. SPIE Newsroom, 2007. http://dx.doi.org/10.1117/2.1200706.0699.   url
bib
Andrei C. Jalba and Jos B. T. M. Roerdink. Efficient surface reconstruction using generalized Coulomb potentials. IEEE Trans. Visualization and Computer Graphics, 13(6):1512–1519, 2007.   pdf
bib
W.J. van der Laan, A.C. Jalba,, and J.B.T.M. Roerdink. Multiresolution MIP rendering of large volumetric data accelerated on graphics hardware. In 13th Ann. Conf. Advanced School for Computing and Imaging (ASCI’07). Pages 59–66, 2007.   bib
Michel A. Westenberg, Jos B. T. M. Roerdink, and Michael H. F. Wilkinson. Volumetric attribute filtering and interactive visualization using the Max-Tree representation. IEEE Transactions on Image Processing, 16(2):2943–2952, 2007.   pdf Δ
bib
Michel A. Westenberg, Sacha A. F. T. van Hijum and Andrzej T. Lulko, Oscar P. Kuipers, and Jos B. T. M. Roerdink. GENeVis: Interactive Visualization of Gene Regulatory Networks. In Benelux Bioinformatics Conference (BBC 2007), Leuven, Belgium, November 12–13. 2007. Poster.   bib
Michel A. Westenberg, Jos B. T. M. Roerdink, Sacha A. F. T. van Hijum, Andrzej T. Lulko, and Oscar P. Kuipers. GENeVis: Interactive Visualization of Gene Regulatory Networks. In SIREN: Scientific ICT Research Event Netherlands, 30 October 2007, TU Delft. 2007. Poster.   bib
W.J. van der Laan, A.C. Jalba, and J.B.T.M. Roerdink. Multiresolution MIP Rendering of Large Volumetric Data Accelerated on Graphics Hardware. In Proc. Eurographics/IEEE VGTC Symposium on Visualization (EuroVis). Pages 243–250, 2007.   pdf
bib
W.J. van der Laan, A.C. Jalba, and J.B.T.M. Roerdink. Wavelet Lifting on Graphics Hardware for Faster Video Decoding. In SIREN: Scientific ICT Research Event Netherlands, 30 October 2007, TU Delft. 2007. Poster.   bib
Maarten H. Everts, Henk Bekker, Adrei Jalba, and Jos B.T.M. Roerdink. Particle Based Image Segmentation with Simulated Annealing. In SIREN: Scientific ICT Research Event Netherlands, 30 October 2007, TU Delft. 2007. Poster.   pdf
bib
Michel A. Westenberg, Sacha A. F. T. van Hijum and Andrzej T. Lulko, Oscar P. Kuipers, and Jos B. T. M. Roerdink. Interactive visualization of gene regulatory networks. In NBIC-ISNB 2007, Amsterdam, April 16–19. 2007. Poster.   bib
Ronald van den Berg, Jos B. T. M. Roerdink, and Frans W. Cornelissen. On the Generality of Crowding: Visual Crowding in Size, Saturation, and Hue Compared to Orientation. Journal of Vision, 7(2):1–11, 7 2007.   pdf
url
bib
Maarten H. Everts, Henk Bekker, Adrei Jalba, and Jos B.T.M. Roerdink. Particle Based Image Segmentation with Simulated Annealing. In Proceedings of the Thirteenth Annual Conference of the Advanced School for Computing and Imaging (ASCI CONFERENCE 2007, June 13–15, 2007, Het Heijderbos, Heijen, The Netherlands). 2007.   pdf
bib
Michel A. Westenberg, Sacha A. F. T. van Hijum and Andrzej T. Lulko, Oscar P. Kuipers, and Jos B. T. M. Roerdink. Interactive Visualization of Gene Regulatory Networks with Associated Gene Expression Time Series Data. In L. Linsen, H. Hagen, and B. Hamann, eds., Visualization in Medicine Life Sciences. Berlin, Germany. Springer Verlag, pages 293–312, 2007.   pdf Δ
bib
M. ten Caat, N. M. Maurits, and J. B. T. M. Roerdink. Functional Unit Maps for Data-Driven Visualization of High-Density EEG Coherence. In Proc. Eurographics/IEEE VGTC Symposium on Visualization (EuroVis). Pages 259–266, 2007.   pdf
bib
M. ten Caat, N. M. Maurits, and J. B. T. M. Roerdink. Watershed-Based Visualization of High-Density EEG Coherence. In Gerald Jean Francis Banon, Junior Barrera, and Ulisses de Mendoca Braga-Neto, eds., Proc. 8th International Symposium on Mathematical Morphology, Rio de Janeiro. Pages 289–300, 2007.   pdf
bib
A. C. Jalba and J. B. T. M. Roerdink. Surface reconstruction from noisy point clouds using Coulomb potentials. In H.-C. Hege and R. Machiraju, eds., EG/IEEE VGTC 6th International Symposium on Volume Graphics, Prague, Czech Republic, Sep. 3-4. Pages 73–80, 2007.   pdf
bib
P.J. Ogao, M.P. Visser, and J.B.T.M. Roerdink. Performance Metrics of a 3D Multiple Selection User Interface Tool in Virtual Environment. In Proc. 1st International Conference in Computer Science and ICT (COSCIT), 5-7th February, Nairobi, Kenya. Pages 85–90, 2007.   bib
B.J. Ferdosi, H. Buddelmeijer, A. Helmi, S.C. Trager, E.A. Valentijn, M.H.F. Wilkinson, J.M. van der Hulst, and J.B.T.M. Roerdink. Visualization of Very Large High-Dimensional Astronomical Data Sets. In SIREN: Scientific ICT Research Event Netherlands, 30 October 2007, Technische Universiteit Delft. 2007. Poster.   pdf
bib

2006

Andrei C. Jalba, Michael H.F. Wilkinson, and Jos B. T. M. Roerdink. Shape representation and recognition through morphological curvature scale spaces. IEEE Trans. Image Processing, 15(2):331–341, February 2006.   pdf
bib
Aleksandra Pi\v{z}urica, Alle Meije Wink, Ewout Vansteenkiste, Wilfried Philips, and Jos B. T. M. Roerdink. A review of wavelet denoising in MRI and ultrasound brain imaging. Current Medical Imaging Reviews, 2(2):247–260, 2006.   pdf
bib
Alle Meije Wink and Jos B. T. M. Roerdink. BOLD Noise Assumptions in fMRI. International Journal of Biomedical Imaging, 2006:Article ID 12014, 11 pages, 2006.   doi
pdf
bib
Diederik W. J. Bosman, Evert-Jan Blom, Ogao, Patrick J., Oscar P. Kuipers, and Jos B. T. M. Roerdink. MOVE: A Multi-level Ontology-based Visualization and Exploration framework for genomic networks. In Silico Biology, 2006.   url
bib
Ronald van den Berg, Aave Hannus, Harold Bekkering , Jos B. T. M. Roerdink, and Frans W. Cornelissen. Differential Feature Crowding. In European Conference on Visual Perception (ECVP), St. Petersburg, Russia, August 2006. 2006. Poster.   pdf
bib
Michel A. Westenberg, Sacha A. F. T. van Hijum and Oscar P. Kuipers, and Jos B. T. M. Roerdink. GENeVis: Gene expression and network visualization. In 3rd Int. Symposium on Networks in Bioinformatics – ISNB 2006, Amsterdam, May 29–31. 2006. Poster.   bib
Aave Hannus, Ronald van den Berg, Harold Bekkering , Jos B. T. M. Roerdink, and Frans W. Cornelissen. Visual Search Near Threshold: Some Features Are More Equal Than Others. Journal Vision, 6(4):523–540, 7 2006.   doi
pdf
bib
Michel A. Westenberg, Sacha A. F. T. van Hijum and Oscar P. Kuipers, and Jos B. T. M. Roerdink. Gene expression and network visualization. In Netherlands Bioinformatics Conference, Ede-Wageningen, April 24. 2006. Poster.   bib
Andrei C. Jalba and Jos B. T. M. Roerdink. Efficient Surface Reconstruction from Noisy Data using Regularized Membrane Potentials. In B. Sousa Santos, T. Ertl, and K. Joy, eds., Data Visualization Eurovis 2006. Eurographics/IEEE VGTC Symposium on Visualization, May 8-10, Lisbon, Portugal. The Eurographics Association, pages 83–90, 2006.   pdf
bib
Andrei C. Jalba and Jos B. T. M. Roerdink. A physically-motivated deformable model based on fluid dynamics. In A. Leonardis, H. Bischof, and A. Pinz, eds., Computer Vision –- ECCV 2006. Springer, Wien, New York, pages 496–507, Proceedings, Part I, 2006.   pdf
url
bib
Alle Meije Wink and Jos B. T. M. Roerdink. Extracting the Haemodynamic Response Function from fMRI Time Series using Fourier-Wavelet Regularised Deconvolution with Orthogonal Spline Wavelets. In Proc. 14th European Signal Processing Conference (EUSIPCO’06), September 4 - 8, Florence, Italy. 2006.   pdf
bib

2005

Lucian Muresan, Remco Renken, Jos B. T. M. Roerdink , and Hendrikus Duifhuis. Automated Correction of Spin-History Related Motion Artefacts in fMRI: Simulated and Phantom Data. IEEE Transactions on Biomedical Engineering, 52(8):1450–1460, 2005.   pdf
bib
Jos B. T. M. Roerdink. Morphological Pyramids in Multiresolution MIP Rendering of Large Volume Data: Survey and New Results. J. Math. Imag. Vision, 22(2/3):143–157, 2005.   pdf
url
bib
Andrei C. Jalba, Michael H. F. Wilkinson, Jos B. T. M. Roerdink, Micha M. Bayer, and Stephen Juggins. Automatic Diatom Identification using Contour Analysis by Morphological Curvature Scale Spaces. Machine Vision and Applications, 16(4):217–228, 2005.   pdf
bib
Ronald van den Berg, Aave Hannus, Jos B. T. M. Roerdink, and Frans W. Cornelissen. A Colour-Size Processing Asymmetry in Visual Conjunction Search. In European Conference on Visual Perception (ECVP), A Coruna, Spain, August 2005. 2005. Poster.   pdf
bib
Frans W. Cornelissen Ronald van den Berg. Simultaneous Colour Search Renders Other Object Features Less Salient. In Second Symposium on Applied Perception in Graphics and Visualization (APGV), A Coruna, Spain, August 2005. 2005. Poster.   pdf
bib
Wim H. Hesselink, Menno Visser, and Jos B. T. M. Roerdink. Euclidean skeletons of 3D data sets in linear time by the integer medial axis transform. In Christian Ronse, Laurent Najman, and Etienne Decenci\‘ere, eds., Mathematical Morphology: 40 Years On (Proc. 7th Intern. Symp. on Mathematical Morphology, April 18-20). Springer, Wien, New York, pages 259–268, 2005.   pdf
bib
M. ten Caat, N. M. Maurits, and J. B. T. M. Roerdink. Tiled Parallel Coordinates for the Visualization of Time-Varying Multichannel EEG Data. In K. W. Brodlie, D. J. Duke, and K. I. Joy, eds., Proc. Eurographics – IEEE VGTC Symposium on Visualization, June 1-3, Leeds, United Kingdom. The Eurographics Association, pages 61–67, 2005.   pdf
bib

2004

Andrei C. Jalba, Michael H.F. Wilkinson, and Jos B. T. M. Roerdink. Morphological hat-transform scale spaces and their use in pattern classification. Pattern Recognition, 37(5):901–915, 2004.   pdf
bib
Alle Meije Wink and Jos B. T. M. Roerdink. Denoising functional MR images: a comparison of wavelet denoising and Gaussian smoothing. IEEE Trans. Med. Imaging, 23(3):374–387, 2004.   pdf
bib
Andrei C. Jalba, Michael H.F. Wilkinson, and Jos B. T. M. Roerdink. CPM: A Deformable Model for Shape Recovery and Segmentation Based on Charged Particles. IEEE Trans. Pattern Anal. Machine Intell., 26(10):1320–1335, 2004.   pdf
bib
Andrei C. Jalba, Michael H.F. Wilkinson, and Jos B. T. M. Roerdink. Automatic segmentation of diatom images for classification. Microscopy Research and Technique, 65(1-2):72–85, September 2004.   pdf
bib
Andrei C. Jalba, Michael H. F. Wilkinson, and Jos B. T. M. Roerdink. Automatic Image Segmentation Using a Deformable Model Based on Charged Particles. In Aurélio Campilho and Mohamed Kamel, eds., Image Analysis and Recognition: International Conference ICIAR 2004, Porto, Portugal, September 29- October 1, 2004, Proceedings, Part I. Pages 1–8, 2004.   pdf
bib

2003

Jos B. T. M. Roerdink. Multiresolution Maximum Intensity Volume Rendering by Morphological Adjunction Pyramids. IEEE Trans. Image Processing, 12(6):653–660, June 2003.   pdf
bib
Jos B. T. M. Roerdink. A new class of morphological pyramids for multiresolution image analysis. In T. Asano, R. Klette, and C. Ronse, eds., Geometry, Morphology, and Computational Imaging. Springer, Wien, New York, pages 165–175, 2003.   pdf
bib
Lucian Muresan and Jos B. T. M. Roerdink. Motion artefacts during k-space acquisition as an encryption-decryption problem. In Physica Medica, vol. XIX, N. 1, Jan. -March 2003, Abstracts Session Medical Physics and Engineering 2003, VIII EFOMP Congress, May 20-23, Eindhoven. Pages 61–62, 2003.   bib
Andrei C. Jalba and Jos B. T. M. Roerdink. Automatic segmentation of diatom images. In Nicolai Petkov and Michel A. Westenberg, eds., Proc. CAIP’2003 (Computer Analysis of Images and Patterns), Groningen, August 25-27. Springer, Wien, New York, pages 329–336, 2003.   pdf
bib
A. C. Jalba and J. B. T. M. Roerdink and M. H. F. Wilkinson. Morphological hat-transform scale spaces and their use in texture classification. In Proc. ICIP’2003 (Int. Conf. Image Processing), Barcelona, Spain, Sept. 14-17. Pages 329–332, 2003.   pdf
bib
A. M. Wink and J. B. T. M. Roerdink. The Effect of Image Enhancement on the Statistical Analysis of Functional Neuroimages: Wavelet-Based Denoising and Gaussian Smoothing. In Proc. SPIE: Medical Imaging. Pages 1320–1330, 2003. 15-20 February, San Diego, USA.   bib
Jos B. T. M. Roerdink. Visualization of Large Data Sets with Applications in the Life Sciences. In S. H. Heisterkamp and R. H. Koning, eds., Large Data Sets, Proc. SSS’03, Royal Dutch Academy of Sciences, Amsterdam. Netherlands Society for Statistics and Operations Research, pages 43–54, 2003.   bib

2002

Michel A. Westenberg and Jos B. T. M. Roerdink. Mixed-method identifications. In H. du Buf and M. Bayer, eds., Automatic Diatom Identification. Singapore. World Scientific Publishing, pages 245–257, 2002.   bib
Michael H. F. Wilkinson, Andrei C. Jalba, Erik R. Urbach, and Jos B. T. M. Roerdink. Identification by mathematical morphology. In J. M. H. Du Buf and M. M. Bayer, eds., Automatic Diatom Identification. World Scientific Publishing Co., Singapore, pages 221–244, 2002.   bib
Jos B. T. M. Roerdink. Comparison of Morphological Pyramids for Multiresolution MIP Volume Rendering. In D. Ebert, P. Brunet, and I. Navazo, eds., Data Visualization 2002. Proc. Eurographics – IEEE TCVG Symposium, May 27-29, 2002, Barcelona, Spain. ACM, New York, pages 61–70, 2002.   pdf
bib
Alle Meije Wink and Jos B. T. M. Roerdink. Enhancing functional neuroimages: wavelet denoising as an alternative to Gaussian smoothing. In Proc. Intern. Conf. on Computer Vision and Graphics (ICCVG 2002), September 25-29, Zakopane, Poland. Pages 787–792, 2002.   pdf
bib
Lucian Muresan, Remco Renken, Jos B. T. M. Roerdink , and Hendrikus Duifhuis. Position-history and spin-history artifacts in fMRI time-series. In A. V. Clough and C.-T. Chen, eds., Medical Imaging 2002: Physiology and Function from Multidimensional Images. SPIE, pages 444–451, 2002.   pdf
bib

2001

Michel A. Westenberg and Jos B. T. M. Roerdink. An extension of Fourier-wavelet volume rendering by view interpolation. Journal of Mathematical Imaging and Vision, 14(2):103–115, 2001.   pdf Δ
bib
Jos B. T. M. Roerdink. Multiresolution Maximum Intensity Volume Rendering by Morphological Pyramids. In D. Ebert, J. M. Favre, and R. Peikert, eds., Data Visualization 2001. Proc. Joint Eurographics – IEEE TCVG Symposium on Visualization, May 28-30, 2001, Ascona, Switzerland. Springer, Wien, New York, pages 45–54, 2001.   pdf
bib
Henk Bekker and Jos B. T. M. Roerdink. An Efficient Algorithm to Calculate the Minkowski Sum of Convex 3D Polyhedra. In V. N. Alexandrov, J. J. Dongarra, B. A. Juliano and R. S. Renner, and C. J. Kenneth Tan, eds., Computational Science - ICCS 2001. Springer, Wien, New York, pages 619–628 (Part I), 2001.   pdf
bib
M. M. Bayer, M. R. Pullan, D. G. Mann, S. Juggins , A. Ciobanu, L. Santos, H. Shahbazkia, H. du Buf, S. Fischer, H. Bunke, M. H. F. Wilkinson and J. B. T. M. Roerdink, J. Pech-Pacheco, G. Cristobal , V. Cirimele, and B. Ludes. ADIAC: Using computer vision technology for automatic diatom identification. In A. Economou - Amilli, eds., Proceedings of the 16th International Diatom Symposium, Athens, Greece, 25 aug -1 sept 2000. Pages 537–562, 2001.   bib
Jos B. T. M. Roerdink and Henk Bekker. Similarity measure computation of convex polyhedra revisited. In G. Bertrand, A. Imiya, and R. Klette, eds., Digital and Image Geometry. Springer, Wien, New York, pages 389–399, 2001.   pdf
url
bib

2000

"A. V. Tuzikov and J. B. T. M. Roerdink and. "Similarity Measures for Convex Polyhedra Based on. Pattern Recognition, 33(6):979–995, 2000.   pdf
bib
J. B. T. M. Roerdink. Group morphology. Pattern Recognition, 33(6):877–895, 2000. Honorable Mention Winner of the 27-th Annual Pattern Recognition Society Award.   pdf
bib
J. B. T. M. Roerdink and A. Meijster. "The watershed transform: definitions. Fundamenta Informaticae, 41:187–228, 2000.   pdf
bib
Michel A. Westenberg and Jos B. T. M. Roerdink. Frequency Domain Volume Rendering by the Wavelet X-Ray Transform. IEEE Transactions on Image Processing, 9(7):1249–1261, 2000.   pdf Δ
bib
Michel A. Westenberg and Jos B. T. M. Roerdink. X-Ray Volume Rendering by Hierarchical Wavelet Splatting. In Proceedings of the 15th International Conference on Pattern Recognition. Barcelona, Spain, September, pages 163–166, September 2000.   pdf Δ
bib
Michel A. Westenberg and Jos B. T. M. Roerdink. X-Ray Volume Rendering Through Two-Stage Splatting. Machine Graphics & Vision, 9(1/2):307–314, 2000. \emph{Best Paper Award GKPO’2000, 6th International Conference on Computer Graphics and Image Processing, May 15-19, 2000, Podlesice, Poland}.   pdf Δ
bib
M. H. F. Wilkinson, J. B. T. M. Roerdink, S. Droop , and M. Bayer. Diatom contour analysis using morphological curvature scale spaces. In Proc. 15th Intern. Conf. on Pattern Recognition (ICPR’2000), Barcelona, Sep. 3-7. Pages 656–659, 2000.   pdf
bib
M. H. F. Wilkinson and J. B. T. M. Roerdink. "Fast morphological attribute operations using Tarjan’s. In John Goutsias, Luc Vincent, and Dan S. Bloomberg, eds., Mathematical Morphology and its Applications to Image and Signal Processing. Kluwer Acad. Publ., Dordrecht, pages 311–320, 2000.   pdf
bib
Arnold Meijster, J. B. T. M. Roerdink, and Wim H. Hesselink. A general algorithm for computing distance transforms in linear time. In John Goutsias, Luc Vincent, and Dan S. Bloomberg, eds., Mathematical Morphology and its Applications to Image and Signal Processing. Kluwer Acad. Publ., Dordrecht, pages 331–340, 2000.   pdf
bib
J. B. T. M. Roerdink and A. Meijster. The watershed transform: definitions, algorithms, and parallellization strategies. In J. Goutsias and H.J.A.M. Heijmans, eds., Mathematical Morphology. IOS Press, pages 187–228, 2000.   pdf
bib

1999

Jos B. T. M. Roerdink and Michel A. Westenberg. Wavelet-Based Volume Visualization. Nieuw Archief voor Wiskunde, 17(2):149–158, 1999.   pdf
bib
Hans du Buf, Micha Bayer, Stephen Droop, Richie Head, Steve Juggins, Stefan Fischer, Horst Bunke , Michael Wilkinson, Jos Roerdink, José Pech-Pacheco, Gabriel Crist\’obal, Hamid Shahbazkia , and Adrian Ciobanu. Diatom Identification: a Double Challenge Called ADIAC. In Proc. 10th Int. Conf. on Image Analysis and Processing (ICIAP’99), Venice, Italy, September 27-29. Pages 734–739, 1999.   pdf
bib
Henk Bekker and Jos B. T. M. Roerdink. "Calculating critical orientations of polyhedra for. In Proc. 2nd Annual IASTED International Conference on Computer Graphics and Imaging, Palm Springs, California USA, Oct. 25-27. Pages 106–111, 1999.   pdf
bib

1998

Jos B. T. M. Roerdink and Michel A. Westenberg. Data-parallel tomographic reconstruction: A comparison of filtered backprojection and direct Fourier reconstruction. Parallel Computing, 24:2129–2142, 1998.   pdf Δ
bib
Arnold Meijster and Jos B. T. M. Roerdink. A disjoint set algorithm for the watershed transform. In S. Theodoridis, I. Pitas, and A. Stouraitis and N. Kalouptsidis, eds., Proc. IX European Signal Processing Conference (EUSIPCO’98), September 8 - 11, 1998, Rhodes, Greece. Typorama Publications, pages 1665–1668, 1998. \textbf{Note: Received best young author paper award for EUSIPCO-98}.   pdf
bib
Alexander V. Tuzikov, Jos B. T. M. Roerdink, Henk J. A. M. Heijmans, and Stanislav V. Sheynin. Measures and Indices of Reflection Symmetry for Convex Polyhedra. In Henk J. A. M. Heijmans and Jos B. T. M. Roerdink, eds., Mathematical Morphology and its Applications to Image and Signal Processing. Kluwer Acad. Publ., Dordrecht, pages 59–65, 1998.   pdf
bib
J. B. T. M. Roerdink. An Introduction to Digital Image Processing. In M. H. F. Wilkinson and F. Schut, eds., Digital Image Analysis of Microbes: Imaging, Morphometry, Fluorometry and Motility Techniques and Applications. John Wiley and Sons Ltd. Pages 3–36, 1998.   bib
Henk J. A. M. Heijmans and Jos B. T. M. Roerdink (eds.) (1998) Mathematical Morphology and its Applications to Image and Signal Processing. Kluwer Acad. Publ., Dordrecht, 1998.   bib

1997

Michel A. Westenberg and Jos B. T. M. Roerdink. Parallelisation of Tomographic Reconstruction Methods. In Proc. fourth Groningen International Information Technology Conference for Students. 1997.   bib
Jos B. T. M. Roerdink, Mattijs J. B. van Delden and Andrea J. S. Hin, and Peter C. van Wolffelaar. A Prototype System for Real Time Computer Animation of Slow Traffic in a Driving Simulator. In Nadia Magnenat Thalmann and V\’aclav Skala, eds., Proceedings Fifth Intern. Conf. in Central Europe on Computer Graphics and Visualization’97, Plze\vn, Czech Republic, Febr. 10-14. University of West Bohemia Press, pages 455–464, 1997.   pdf
bib
Jos B. T. M. Roerdink and Arnold Meijster. "Segmentation by watersheds: definition and parallel. In "Franc Solina, Walter G. Kropatsch, and Reinhard Klette, eds., Advances in Computer Vision. "Wien. Springer, pages 21–30, 1997.   pdf
bib

1996

J. B. T. M. Roerdink. Computer vision and mathematical morphology. Computing, Supplement 11, 1996.   pdf
bib
A. Meijster and J. B. T. M. Roerdink. Computation of Watersheds Based on Parallel Graph Algorithms. In P. Maragos, R. W. Shafer, and M. A. Butt, eds., Mathematical Morphology and its Applications to Image and Signal Processing. Kluwer Acad. Publ., Dordrecht, pages 305–312, 1996.   pdf
bib
J. B. T. M. Roerdink. The Generalized Tailor Problem. In P. Maragos, R. W. Shafer, and M. A. Butt, eds., Mathematical Morphology and its Applications to Image and Signal Processing. Kluwer Acad. Publ., Dordrecht, pages 57–64, 1996.   pdf
bib

1995

J. B. T. M. Roerdink and G. S. M. Blaauwgeers. Minkowski operations as a tool in Constructive Solid Geometry. In J. C. van Vliet, eds., Proc. Computing Science in the Netherlands, 27-28 november, Utrecht. Stichting Mathematisch Centrum, Amsterdam, pages 194–204, 1995.   bib
A. Meijster and J. B. T. M. Roerdink. The implementation of a parallel watershed algorithm. In J. C. van Vliet, eds., Proc. Computing Science in the Netherlands, 27-28 november, Utrecht. Stichting Mathematisch Centrum, Amsterdam, pages 134–142, 1995.   bib
A. Meijster and J. B. T. M. Roerdink. An alternative algorithm for computing watersheds on shared memory parallel computers. In Proc. Summer School on Morphological Image and Signal Processing, 27-30 September, Zakopane, Poland. Pages 37–42, 1995.   pdf
bib
A. Meijster and J. B. T. M. Roerdink. A proposal for the implementation of a parallel watershed algorithm. In V. Hlav\’a\v{c} and R. \v{S}\’ara, eds., Computer Analysis of Images and Patterns. Springer, Wien, New York, pages 790–795, 1995.   pdf
bib
J. B. T. M. Roerdink. Nonlinear image restoration in confocal microscopy: stability under noise. In I. Pitas, eds., Proc. IEEE Workshop on Nonlinear Signal and Image processing, June 20-22, Neos Marmaras, Halkidiki, Greece. Pages 750–753, 1995.   pdf
bib

1994

J. B. T. M. Roerdink. FFT-based methods for nonlinear image restoration in confocal microscopy. J. Math. Imag. Vision, 4(2):199–207, 1994.   pdf
bib
A. -M. Neutel, J. B. T. M. Roerdink, and P. C. de Ruiter. Global stability of two-level detritus decomposer food chains. J. Theor. Biol., 171:351–353, 1994.   bib
J. B. T. M. Roerdink. Nonlinear image restoration in confocal microscopy. In E. Backer, eds., Proc. Computing Science in the Netherlands, 21-22 november, Utrecht. Stichting Mathematisch Centrum, Amsterdam, pages 253–259, 1994.   bib
J. B. T. M. Roerdink. Manifold shape: from differential geometry to mathematical morphology. In Y. -L. O, A. Toet, D. Foster and H. J. A. M. Heijmans, and P. Meer, eds., Shape in Picture. Springer, Wien, New York, pages 209–223, 1994.   pdf
bib
J. B. T. M. Roerdink and G. S. M. Blaauwgeers. Visualization of Minkowski operations by computer graphics techniques. In J. Serra and P. Soille, eds., Mathematical Morphology and its Applications to Image Processing. Kluwer Acad. Publ., Dordrecht, pages 289–296, 1994.   pdf
bib

1993

J. B. T. M. Roerdink and M. Bakker. An FFT-based method for attenuation correction in fluorescence confocal microscopy. J. Microscopy, 169:3–14, 1993.   pdf
bib
J. B. T. M. Roerdink and M. Zwaan. Cardiac magnetic resonance imaging by retrospective gating: mathematical modelling and reconstruction algorithms. Euro. Jnl of Applied Mathematics, 4:241–270, 1993.   pdf
bib
J. B. T. M. Roerdink. Solving the empty space problem in robot path planning by mathematical morphology. In J. Serra and P. Salembier, eds., Proc. Workshop ‘Mathematical Morphology and its Applications to Signal Processing’, Barcelona, Spain, May 12-14. Pages 216–221, 1993.   pdf
bib
J. B. T. M. Roerdink. Mathematical morphology with non-commutative symmetry groups. In E. R. Dougherty, eds., Mathematical Morphology in Image Processing. Marcel Dekker, New York, NY, pages 205–254, 1993.   bib

1992

J. B. T. M. Roerdink. Computerized tomography and its applications: a guided tour. Nieuw Archief voor Wiskunde, 10(3, November):277–308, 1992. Special Issue on Image Processing.   pdf
bib
(guest editor) Roerdink. Special Issue on Image Processing. Nieuw Archief voor Wiskunde, 10(3, November):155–326, 1992.   bib

1990

J. B. T. M. Roerdink. A Markov chain identity and monotonicity of the diffusion constants for a random walk in a heterogeneous environment. Math. Proc. Camb. Phil. Soc., 108:111–126, 1990.   bib
J. B. T. M. Roerdink, K. E. Shuler, and G. F. Lawler. Diffusion in lattices with anisotropic scatterers. J. Statist. Phys., 59:23–52, 1990.   bib
J. B. T. M. Roerdink. Mathematical morphology on the sphere. In Proc. SPIE Conf. Visual Communications and Image Processing ’90, Lausanne. Pages 263–271, 1990.   bib

1989

J. Grasman and J. B. T. M. Roerdink. Stochastic and chaotic relaxation oscillations. J. Statist. Phys., 54:949–970, 1989.   bib
J. B. T. M. Roerdink. The biennial life strategy in a random environment. Supplement. J. Math. Biol., 27:309–319, 1989.   bib
J. B. T. M. Roerdink. Products of random matrices or ‘Why do biennials live longer than two years?’. CWI Quarterly, 2(1):37–44, 1989.   bib

1988

J. B. T. M. Roerdink. The biennial life strategy in a random environment. J. Math. Biol., 26:199–215, 1988.   bib
J. B. T. M. Roerdink and H. J. A. M. Heijmans. Mathematical morphology for structures without translation symmetry. Signal Processing, 15:271–277, 1988.   bib

1984

J. B. T. M. Roerdink. Some additional remarks on the cumulant expansion for linear stochastic differential equations. Physica, 123A:369–385, 1984.   bib

1983

J. B. T. M. Roerdink. Approximate solution methods for linear stochastic difference equations I. Moments. Physica, 119A:455–484, 1983.   bib
J. B. T. M. Roerdink. Approximate solution methods for linear stochastic difference equations II. Inhomogeneous equations, multi-time averages, biological application. Physica, 120A:153–177, 1983.   bib

1982

J. B. T. M. Roerdink. A cumulant expansion for the time correlation functions of solutions to linear stochastic differential equations. Physica, 112A:557–587, 1982.   bib

1981

J. B. T. M. Roerdink and A. Weyland. A generalized Fokker-Planck equation in the case of the Volterra model. Bull. Math. Biol., 43:69–79, 1981.   bib
J. B. T. M. Roerdink. Inhomogeneous linear random differential equations with mutual correlations between multiplicative, additive and initial value terms. Physica, 109A:23–57, 1981.   bib