Publications Jos Roerdink

• Henk J. A. M. Heijmans and Jos B. T. M. Roerdink (eds.). Mathematical Morphology and its Applications to Image and Signal Processing. Kluwer, 1998 (Computational Imaging and Vision, Vol. 12).

• Michael ten Caat, Natasha M. Maurits and Jos B. T. M. Roerdink. Design and Evaluation of Tiled Parallel Coordinate Visualization of Multichannel EEG Data. IEEE Trans. Visualization and Computer Graphics, 2006, in press.

• Alle Meije Wink and Jos B.T.M. Roerdink. BOLD noise assumptions in fMRI. Intern. J. Biomedical Imaging, 2006, in press.

• Aave Hannus, Ronald van den Berg, Harold Bekkering , Jos B. T. M. Roerdink and Frans W. Cornelissen. Visual Search Near Threshold: Some Features Are More Equal Than Others. Journal of Vision, 6 (4), pp. 523-540, 2006.

• Aleksandra Pizurica, Alle Meije Wink, Ewout Vansteenkiste, Wilfried Philips and Jos B.T.M. Roerdink. A review of wavelet denoising in MRI and ultrasound brain imaging. Current Medical Imaging Reviews, 2 (2), pp. 247-260, 2006.

• A.C. Jalba, M.H.F. Wilkinson and J.B.T.M. Roerdink. Shape representation and recognition through morphological curvature scale spaces. IEEE Trans. Image Processing, 15 (2), pp. 331-341, 2006.

• Lucian Muresan, Remco Renken, Jos B. T. M. Roerdink and Hendrikus Duifhuis. Automated Correction of Spin-History Related Motion Artefacts in fMRI: Simulated and Phantom Data. IEEE Trans. Biomedical Engineering, 52 (8), pp. 1450-1460, 2005.

• A.C. Jalba, M.H.F. Wilkinson, J.B.T.M. Roerdink, Micha M. Bayer and Stephen Juggins. Automatic Diatom Identification using Contour Analysis by Morphological Curvature Scale Spaces. Machine Vision and Applications, 16 (4), pp. 217-228, 2005.

• Jos B. T. M. Roerdink. Morphological Pyramids in Multiresolution MIP Rendering of Large Volume Data: Survey and New Results.. J. Math. Imag. Vision, 22, pp. 143-157, 2005.

• A.C. Jalba, M.H.F. Wilkinson and J.B.T.M. Roerdink. Automatic segmentation of diatom images for classification. Microscopy Research and Technique, 65(1-2), pp. 72-85, 2004.

• A.C. Jalba, M.H.F. Wilkinson and J.B.T.M. Roerdink. CPM: A Deformable Model for Shape Recovery and Segmentation Based on Charged Particles. IEEE Trans. Pattern Anal. Mach. Intell., 26(10), pp. 1320-1335, 2004.

• A.C. Jalba, M.H.F. Wilkinson and J.B.T.M. Roerdink. Morphological hat-transform scale spaces and their use in pattern classification. Pattern Recognition , 37(5), pp. 901-915, 2004.

• Alle Meije Wink and Jos B. T. M. Roerdink. Denoising functional MR images: a comparison of wavelet denoising and Gaussian smoothing. IEEE Transactions on Medical Imaging, 23 (3), pp. 374-387, 2004.

• Jos B. T. M. Roerdink. Multiresolution Maximum Intensity Volume Rendering by Morphological Adjunction Pyramids. IEEE Transactions on Image Processing, 12 (6), pp. 653-660, June 2003.

• Michel A. Westenberg and Jos B. T. M. Roerdink. An Extension of Fourier-Wavelet Volume Rendering by View Interpolation. Journal of Mathematical Imaging and Vision 14 (2), pp. 103-115, 2001.

• J.B.T.M. Roerdink. Group morphology. Pattern Recognition 33 (6), pp. 877-895, 2000.

• Alexander Tuzikov, Jos B. T. M. Roerdink and Henk J. A. M. Heijmans. Similarity Measures for Convex Polyhedra Based on Minkowski Addition. Pattern Recognition, 33 (6), pp. 979-995, 2000.

• J.B.T.M. Roerdink and A. Meijster. The watershed transform: definitions, algorithms, and parallellization strategies. Fundamenta Informaticae 41, pp. 187-228, 2000.

• M. A. Westenberg and J. B. T. M. Roerdink. Frequency Domain Volume Rendering by the Wavelet X-ray Transform. IEEE Transactions on Image Processing, 9 (7), pp. 1249-1261, July 2000.

• M. A. Westenberg and J. B. T. M. Roerdink. X-Ray Volume Rendering through Two-Stage Splatting. Machine Graphics and Vision, 9(1/2):307-314, 2000.

• J. B. T. M. Roerdink and M. A. Westenberg. Wavelet-Based Volume Visualization. Nieuw Archief voor Wiskunde, 17(2):149-158, 1999.

• J. B. T. M. Roerdink and M. A. Westenberg. Data-parallel tomographic reconstruction: A comparison of filtered backprojection and direct Fourier reconstruction. Parallel Computing, 24:2129-2142, 1998.

• J.B.T.M. Roerdink. Computer vision and mathematical morphology. Computing, Supplement 11, pp. 131-148, 1996.

• J.B.T.M. Roerdink. FFT-based methods for nonlinear image restoration in confocal microscopy. J. Math. Imaging and Vision 4 (2), 1994, pp. 199-207.

• A.-M. Neutel, J. B. T. M. Roerdink and P. C. de Ruiter. Global stability of two-level detritus decomposer food chains. J. Theor. Biol. 171, pp. 351-353, 1994.

• J.B.T.M. Roerdink and M. Zwaan. Cardiac magnetic resonance imaging by retrospective gating: mathematical modelling and reconstruction algorithms. Euro. Jnl of Applied Mathematics 4, 1993, pp. 241-270.

• J.B.T.M. Roerdink, M. Bakker. An FFT-based method for attenuation correction in fluorescence confocal microscopy. J. Microscopy 169, 1993, pp. 3-14.

• J.B.T.M. Roerdink. Computerized tomography and its applications: a guided tour. Nieuw Archief voor Wiskunde 10 (3), pp. 277-308, November 1992.

• J. B. T. M. Roerdink. A Markov chain identity and monotonicity of the diffusion constants for a random walk in a heterogeneous environment. Math. Proc. Camb. Phil. Soc. 108, 111-126, 1990.

• J. B. T. M. Roerdink and K. E. Shuler and G. F. Lawler. Diffusion in lattices with anisotropic scatterers. J. Stat. Phys. 59, 23-52, 1990.

• J. Grasman and J. B. T. M. Roerdink. Stochastic and chaotic relaxation oscillations. J. Stat. Phys. 54, 949-970, 1989.

• J. B. T. M. Roerdink. The biennial life strategy in a random environment. Supplement. J. Math. Biology 27, 309-319, 1989.

• J. B. T. M. Roerdink. Products of random matrices or `Why do biennials live longer than two years?'. CWI Quarterly 2 (1), 37-44, 1989.

• J. B. T. M. Roerdink. The biennial life strategy in a random environment. J. Math. Biology 26, 199-215, 1988.

• J.B.T.M. Roerdink, H.J.A.M. Heijmans. Mathematical morphology for structures without translation symmetry. Signal Processing 15, 1988, pp. 271-277.

• J. B. T. M. Roerdink. A note on the asymptotic properties of correlated random walks. J. Appl. Prob. 22, 951-956, 1985.

• J. B. T. M. Roerdink. On the calculation of random walk properties from lattice bond enumeration. Physica 132A, 253-268, 1985.

• J. B. T. M. Roerdink and K. E. Shuler. Asymptotic properties of multistate random walks. I. Theory. J. Stat. Phys. 40, 205-240, 1985.

• J. B. T. M. Roerdink and K. E. Shuler. Asymptotic properties of multistate random walks. II. Applications to inhomogeneous periodic and random lattices. J. Stat. Phys. 41, 581-606, 1985.

• J. B. T. M. Roerdink. Some additional remarks on the cumulant expansion for linear stochastic differential equations. Physica 123A, 369-385, 1984.

• J. B. T. M. Roerdink. Approximate solution methods for linear stochastic difference equations I. Moments. Physica 119A, 455-484, 1983.

• J. B. T. M. Roerdink. Approximate solution methods for linear stochastic difference equations II. Inhomogeneous equations, multi-time averages, biological application. Physica 120A, 153-177, 1983.

• J. B. T. M. Roerdink. A cumulant expansion for the time correlation functions of solutions to linear stochastic differential equations. Physica 112A, 557-587, 1982.

• J. B. T. M. Roerdink. Inhomogeneous linear random differential equations with mutual correlations between multiplicative, additive and initial value terms. Physica 109A, 23-57, 1981.

• J. B. T. M. Roerdink and A. Weyland. A generalized Fokker-Planck equation in the case of the Volterra model. Bull. Math. Biol. 43, 69-79, 1981.

• J.B.T.M. Roerdink (ed.). Special Issue on Image Processing. Nieuw Archief voor Wiskunde, Volume. 10 (3), Nov. 1992, pp. 155-326.

• Michael H.F. Wilkinson, Andrei C. Jalba, Erik R. Urbach and Jos B.T.M. Roerdink. Identification by mathematical morphology. In: Automatic Diatom Identification, Du~Buf, J. M. H. and Bayer, M. M. (eds.), Series in Machine Perception and Artificial Intelligence vol. 51, World Scientific Publishing Co., Singapore, 2002, chapter 11, pp. 221-244.

• Michel A. Westenberg and Jos B.T.M. Roerdink. Mixed-method identifications. In: Automatic Diatom Identification, Du~Buf, J. M. H. and Bayer, M. M. (eds.), Series in Machine Perception and Artificial Intelligence vol. 51, World Scientific Publishing Co., Singapore, 2002, chapter 12, pp. 245-257.

• J. B. T. M. Roerdink and A. Meijster. The watershed transform: definitions, algorithms, and parallellization strategies. In: Mathematical Morphology, J. Goutsias and H.J.A.M. Heijmans (eds.), IOS Press, 2000, pp. 187-228.

• J.B.T.M. Roerdink. An Introduction to Digital Image Processing. In: Digital Image Analysis of Microbes: Imaging, Morphometry, Fluorometry and Motility Techniques and Applications, M.H.F. Wilkinson and F. Schut (eds.), Modern Microbiological Methods (M. Goodfellow series editor), John Wiley and Sons Ltd, 1998, Chapter 1, pp. 3-36.

• J.B.T.M. Roerdink. Mathematical morphology with non-commutative symmetry groups. In: Mathematical Morphology in Image Processing, E.R. Dougherty (ed.), Marcel Dekker, New York, 1993, Chapter 7, pp. 205-254.

• J.B.T.M. Roerdink. On the construction of translation and rotation invariant morphological operators. In: Mathematical Morphology: Theory and Hardware, Oxford Univ. Press, R. M. Haralick (ed.), to appear.

• J.B.T.M. Roerdink. Group invariance in mathematical morphology. In: From Segmentation to Interpretation and Back: Mathematical Methods in Computer Vision, T. Moons, E. Pauwels and L. van Gool (eds.), to appear.

• Andrei C. Jalba and Jos B. T. M. Roerdink. A physically-motivated deformable model based on fluid dynamics. In: Computer Vision --- ECCV 2006, A. Leonardis, H. Bischof and A. Pinz (eds.), 2006, LNCS 3951, pp. 496-507, Proceedings, Part I.

• Andrei C. Jalba and Jos B. T. M. Roerdink. Efficient Surface Reconstruction from Noisy Data using Regularized Membrane Potentials. In: Data Visualization Eurovis 2006. Eurographics/IEEE VGTC Symposium on Visualization, May 8-10, Lisbon, Portugal, B. Sousa Santos and T. Ertl and K. Joy (eds.), 2006, The Eurographics Association, pp. 83-90.

• M. ten Caat, N. M. Maurits and J. B. T. M. Roerdink. Tiled Parallel Coordinates for the Visualization of Time-Varying Multichannel EEG Data. In: Proc. Eurographics -- IEEE VGTC Symposium on Visualization, June 1-3, Leeds, United Kingdom, K. W. Brodlie and D. J. Duke and K. I. Joy (eds.), 2005, The Eurographics Association, pp. 61-67.

• Wim H. Hesselink, Menno Visser and Jos B. T. M. Roerdink. Euclidean skeletons of 3D data sets in linear time by the integer medial axis transform. In: Mathematical Morphology: 40 Years On (Proc. 7th Intern. Symp. on Mathematical Morphology, April 18-20), C. Ronse, L. Najman and E. Decenciere (eds.), 2005, Springer, pp. 259-268.

• Andrei C. Jalba, Michael H. F. Wilkinson and Jos B. T. M. Roerdink. Automatic Image Segmentation Using a Deformable Model Based on Charged Particles. Proc. Image Analysis and Recognition: International Conference ICIAR 2004 , Porto, Portugal, September 29- October 1, 2004, Lect. Notes Computer Science 3211, pp. 329-336, pp. 1-8.

• Jos B.T.M. Roerdink. A new class of morphological pyramids for multiresolution image analysis. In: Geometry, Morphology, and Computational Imaging, Lect. Notes Computer Science 2616, pp. 165-175, 2003, T. Asano, R. Klette and C. Ronse (eds.).

• A.C. Jalba and J.B.T.M. Roerdink. Automatic segmentation of diatom images. Proc. CAIP'2003 (Computer Analysis of Images and Patterns) , Groningen, August 25-27, 2003, Lect. Notes Computer Science 2756, pp. 329-336, N. Petkov and M. A. Westenberg (eds.).

• A. C. Jalba, J. B. T. M. Roerdink and M. H. F. Wilkinson. Morphological hat-transform scale spaces and their use in texture classification. Proc. ICIP'2003 (Int. Conf. Image Processing) , Barcelona, Spain, Sept. 14-17, vol. I, pp. 329-332, 2003.

• Alle Meije Wink and Jos B. T. M. Roerdink. Enhancing functional neuroimages: wavelet denoising as an alternative to Gaussian smoothing. In: Proc. Intern. Conf. on Computer Vision and Graphics (ICCVG 2002), September 25-29, Zakopane, Poland, 2002, pp. 787-792.

• Jos B.T.M. Roerdink Comparison of Morphological Pyramids for Multiresolution MIP Volume Rendering. In: Data Visualization 2002. Proc. Joint Eurographics -- IEEE TCVG Symposium, May 27-29, 2002, Barcelona, Spain, D. Ebert and P. Brunet and I. Navazo (eds.), Association for Computing Machinery, New York, 2002, pp. 61-70.

• Jos B.T.M. Roerdink and Henk Bekker. Similarity measure computation of convex polyhedra revisited. In: Digital and Image Geometry, Lecture Notes in Computer Science 2243, G. Bertrand, A. Imiya and R. Klette (eds.), Springer 2002, pp. 389-399.

• Lucian Muresan, Remco Renken, Jos B. T. M. Roerdink and Hendrikus Duifhuis. Position-history and spin-history artifacts in fMRI time-series. In: Proc. Medical Imaging 2002: Physiology and Function from Multidimensional Images, A. V. Clough and C.-T. Chen (eds.), Proc. SPIE vol. 4683, 2002, pp. 444-451.

• Henk Bekker and Jos B. T. M. Roerdink. An Efficient Algorithm to Calculate the Minkowski Sum of Convex 3D Polyhedra. In: Proc. Computational Science - ICCS 2001, Lecture Notes in Computer Science 2074, V. N. Alexandrov, J. J. Dongarra, B. A. Juliano, R. S. Renner and C. J. Kenneth Tan (eds.), Springer, 2001, pp. 619-628 (Part I).

• Jos B. T. M. Roerdink. Multiresolution Maximum Intensity Volume Rendering by Morphological Pyramids. In: Data Visualization 2001. Proc. Joint Eurographics -- IEEE TCVG Symposium on Visualization, May 28-30, 2001, Ascona, Switzerland, D. Ebert and J. M. Favre and R. Peikert (eds.), Springer, 2001, pp. 45-54.

• Michel A. Westenberg and Jos B. T. M. Roerdink. X-ray volume rendering by hierarchical wavelet splatting. In: Proc. 15th Intern. Conf. on Pattern Recognition (ICPR'2000), Barcelona, Sep. 3-7, 2000, pp. 163-166.

• M.H.F. Wilkinson and J.B.T.M. Roerdink. Fast morphological attribute operations using Tarjan's union-find algorithm. In: Mathematical Morphology and its Applications to Image and Signal Processing, J. Goutsias, L. Vincent and D. S. Bloomberg (eds.), Kluwer, 2000, pp. 311-320.

• Arnold Meijster, Jos B.T.M. Roerdink and Wim H. Hesselink. A general algorithm for computing distance transforms in linear time. In: Mathematical Morphology and its Applications to Image and Signal Processing, J. Goutsias, L. Vincent and D. S. Bloomberg (eds.), Kluwer, 2000, pp. 331-340.

• Michael H.F. Wilkinson, Jos B.T.M. Roerdink, Stephen Droop and Micha Bayer. Diatom contour analysis using morphological curvature scale spaces. In: Proc. 15th Intern. Conf. on Pattern Recognition (ICPR'2000), Barcelona, Sep. 3-7, pp. 656-659, 2000.

• Henk Bekker and Jos B. T. M. Roerdink. Calculating critical orientations of polyhedra for similarity measure evaluation. In: Proc. 2nd Annual IASTED International Conference on Computer Graphics and Imaging, Oct. 25-27, 1999, Palm Springs, California USA, pp. 106-111.

• H. du Buf, M. Bayer, S. Droop, R. Head, S. Juggins, S. Fischer, H. Bunke, M. Wilkinson, J. Roerdink, J. Pech-Pacheco, G. Cristobal, H. Shahbazkia and A. Ciobanu. Diatom Identification: a Double Challenge Called ADIAC. In: Proc. 10th Int. Conf. on Image Analysis and Processing (ICIAP'99), Venice, Italy, September 27-29, pp. 734-739, 1999.

• Alexander V. Tuzikov, Jos B.T.M. Roerdink, Henk J.A.M. Heijmans and Stanislav V. Sheynin. Measures and Indices of Reflection Symmetry for Convex Polyhedra. In: Mathematical Morphology and its Applications to Image and Signal Processing, Henk J. A. M. Heijmans and Jos B. T. M. Roerdink (eds.), Kluwer, 1998, pp. 59-65.

• A. Meijster and J.B.T.M. Roerdink. A disjoint set algorithm for the watershed transform. In: Proc. EUSIPCO'98, IX European Signal Processing Conference, September 8 - 11, 1998, Rhodes, Greece, pp. 1665-1668.

• Jos B. T. M. Roerdink, Mattijs J. B. van Delden, Andrea J. S. Hin and Peter C. van Wolffelaar. A Prototype System for Real Time Computer Animation of Slow Traffic in a Driving Simulator. In: Proc. Fifth Intern. Conf. in Central Europe on Computer Graphics and Visualization'97, Plzen, Czech Republic, Febr. 10-14, Nadia Magnenat Thalmann and Vaclav Skala (eds.), 1997, pp. 455-464.

• Jos B. T. M. Roerdink and Arnold Meijster. Segmentation by watersheds: definition and parallel implementation. In: Advances in Computer Vision, F. Solina, W.G. Kropatsch, R. Klette and Ruzena Bajcsy (eds.), pp. 21--30, Springer, 1997.

• J.B.T.M. Roerdink. The Generalized Tailor Problem. In: Mathematical Morphology and its Applications to Image and Signal Processing, P. Maragos, R.W. Shafer, M.A. Butt (eds.), Kluwer, 1996, pp. 57-64.

• A. Meijster and J.B.T.M. Roerdink. Computation of Watersheds Based on Parallel Graph Algorithms. In: Mathematical Morphology and its Applications to Image and Signal Processing, P. Maragos, R.W. Shafer, M.A. Butt (eds.), Kluwer, 1996, pp. 305-312.

• A. Meijster and J.B.T.M. Roerdink. The Implementation of a Parallel Watershed Algorithm. In: Proc. Computing Science in the Netherlands, 27-28 november, Utrecht, 1995, pp. 134-142.

• J.B.T.M. Roerdink and G.S.M. Blaauwgeers. Minkowski operations as a tool in Constructive Solid Geometry. In: Proc. Computing Science in the Netherlands, 27-28 november, Utrecht, 1995, pp. 194-204.

• A. Meijster and J.B.T.M. Roerdink. An alternative algorithm for computing watersheds on shared memory parallel computers. In: Proc. Summer School on Morphological Image and Signal Processing, 27-30 September, Zakopane, Poland, 1995, pp. 37-42.

• A. Meijster and J.B.T.M. Roerdink. A proposal for the implementation of a parallel watershed algorithm. In: Proc. CAIP'95, September 6-8, Prague, Czech Republic, Lect. Notes Comp. Sci. 970, 1995, pp. 790-795.

• J.B.T.M. Roerdink. Nonlinear image restoration in confocal microscopy: stability under noise. Proc. IEEE Workshop on Nonlinear Signal and Image processing, June 20-22, Neos Marmaras, Halkidiki, Greece, I. Pitas (ed.), 1995, pp. 750-753.

• J.B.T.M. Roerdink and G.S.M. Blaauwgeers. Visualization of Minkowski operations by computer graphics techniques. In: Mathematical Morphology and its Applications to Image Processing, J. Serra and P. Soille (eds.), Kluwer, 1994, pp. 289-296.

• J.B.T.M. Roerdink. Manifold shape: from differential geometry to mathematical morphology. In: Shape in Picture, Y.-L. O et al. (eds.), Springer, Berlin, 1994, pp. 209-223 (NATO ASI Series F 126).

• J.B.T.M. Roerdink. Nonlinear image restoration in confocal microscopy. Proc. Computing Science in the Netherlands, 21-22 november, Utrecht, 1994, pp. 253-259.

• J.B.T.M. Roerdink. Solving the empty space problem in robot path planning by mathematical morphology. In: Proc. Workshop `Mathematical Morphology and its Applications to Signal Processing', Barcelona, Spain, May 12-14, J. Serra and P. Salembier (eds.), 1993, pp. 216-221.

• J.B.T.M. Roerdink. Mathematical morphology on the sphere. Proc. SPIE Conf. Visual Communications and Image Processing '90, Lausanne, 1990, pp. 263-271.

• M. A. Westenberg and J. B. T. M. Roerdink. Parallelisation of Tomographic Reconstruction Methods. In Proceedings of the fourth Groningen International Information Technology Conference for Students. University of Groningen, February 1997, pp. 67-74.

• R. H. Pijnacker and J. B. T. M. Roerdink. Interaction in a Virtual Environment. In Proceedings of the fourth Groningen International Information Technology Conference for Students. University of Groningen, February 1997, pp. 45-52.

• Jos B. T. M. Roerdink, Mattijs J. B. van Delden, Andrea J. S. Hin and Peter C. van Wolffelaar. Real-Time Computer Animation of Bicyclists and Pedestrians in a Driving Simulator. Report CS-R9606, Dept. of Computing Science, University of Groningen, Dec. 1996.

• J. B. T. M. Roerdink. Lemma Tomography. In: Encyclopaedia of Mathematics (Eng. transl. Soviet Encyclopaedia of Mathematics), M. Hazewinkel (ed.), pp. 179-181, Kluwer, 1993.

• J. B. T. M. Roerdink. Approximate solution methods for linear stochastic differential and difference equations. PhD Thesis, University of Utrecht, 1983.