% IMPORTANT: When editing, NEVER EVER change a Bibtex key!!! Also, please stick to the procedures outlined here: http://www.cs.rug.nl/svcg/internal/PublicPages/Publications
% 2020
@article{20HeKo, title = "Conversion of B-rep CAD models into globally G1 triangular splines", journal = "Computer Aided Geometric Design", volume = "", pages = "to appear", year = "2020", doi = "https://doi.org/10.1016/j.cagd.2020.101832", url = "", author = "G.J. Hettinga and J. Kosinka", }
@inproceedings{20Xingyu, title = {Visual Exploration of 3D Shape Databases via Feature Selection}, author = {X. Chen and G. Zeng and J. Kosinka and A. Telea}, booktitle = {Proc. IVAPP}, year = 2020}
% 2019
@article{HETTINGA2019101769, title = "Colour interpolants for polygonal gradient meshes", journal = "Computer Aided Geometric Design", volume = "74", pages = "101769", year = "2019", issn = "0167-8396", doi = "https://doi.org/10.1016/j.cagd.2019.101769", url = "http://www.sciencedirect.com/science/article/pii/S0167839619300780", author = "G.J. Hettinga and R. Brals and J. Kosinka", }
@article{BARENDRECHT201977, title = "A bivariate {$C^1$} subdivision scheme based on cubic half-box splines", journal = "Computer Aided Geometric Design", volume = "71", pages = "77--89", year = "2019", issn = "0167-8396", doi = "https://doi.org/10.1016/j.cagd.2019.04.004", url = "http://www.sciencedirect.com/science/article/pii/S0167839619300184", author = "P.J. Barendrecht and M. Sabin and J. Kosinka", }
@article{HETTINGA2019101024, title = "Noisy gradient meshes: {A}ugmenting gradient meshes with procedural noise", journal = "Graphical Models", volume = "103", pages = "101024", year = "2019", issn = "1524-0703", doi = "https://doi.org/10.1016/j.gmod.2019.101024", url = "http://www.sciencedirect.com/science/article/pii/S1524070319300153", author = "G.J. Hettinga and R. van Beckhoven and J. Kosinka", }
@ARTICLE{Besancon:2019:HTT,
author = {Lonni Besan{\c{c}}on and Mickael Sereno and Mehdi Ammi and Lingyun Yu and Tobias Isenberg},
title = {Hybrid Touch/Tangible Spatial {3D} Data Selection},
journal = {Computer Graphics Forum},
year = {2019},
volume = {38},
number = {3},
month = jun,
url = {https://tobias.isenberg.cc/VideosAndDemos/Besancon2019HTT}
}
@ARTICLE{Glas:2019:IGS,
author = {H.H. Glas and J. Kraeima and L. Yu and P.M.A. van Ooijen and A.J.W. Rosenberg and F.K.L. Spijkervet and M.J.H. Witjes},
title = {Image guided surgery and the use of augmented reality in cranio-maxillo-facial surgery},
journal = {International Journal of Oral and Maxillofacial Surgery},
year = {2019},
volume = {48},
month = jun,
ISSN = {0901-5027}
doi = {10.1016/j.ijom.2019.03.231}
}
@ARTICLE{aguilar19:_distin_patien_with_coord_disor,
author = {V. S. Aguilar and O. M. Manzanera and
D. A. Sival and N. M. Maurits and
J. B. T. M. Roerdink},
journal = {IEEE Transactions on Biomedical Engineering},
title = {Distinguishing Patients With a Coordination Disorder
From Healthy Controls Using Local Features of
Movement Trajectories During the Finger-to-Nose
Test},
year = 2019,
volume = 66,
number = 6,
pages = {1714-1722},
keywords = {Trajectory;Three-dimensional
displays;Pediatrics;Task
analysis;Pathology;Indexes;Probabilistic
logic;Coordination
disorders;classification;finger-to-nose
test;generalized linear models;instantaneous speed
and local curvature},
doi = {10.1109/TBME.2018.2878626},
ISSN = {0018-9294},
month = {June}
}
@ARTICLE{WuZeQiWaKo19,
author= {Z. Wu and M. Zeng and F. Qin and Y. Wang and J. Kosinka},
journal= {IEEE Computer Graphics and Applications},
title= {Active 3-D Shape Cosegmentation With Graph Convolutional Networks},
year= {2019},
volume= {39},
number= {2},
pages= {77--88},
doi= {10.1109/MCG.2019.2891634},
ISSN= {0272-1716}
}
@Article{KoBa19,
author = {Kosinka, J. and Barton, M.},
title = {Gaussian quadrature for C1 cubic Clough-Tocher macro-triangles},
journal = {Journal of Computational and Applied Mathematics},
year = 2019,
volume = 351,
pages = {6--13},
doi = {10.1016/j.cam.2018.10.036}
}
@Article{BaKo19,
author = {Barton, M. and Kosinka, J.},
title = {On numerical quadrature for C1 quadratic Powell-Sabin 6-split macro-triangles},
journal = {Journal of Computational and Applied Mathematics},
year = 2019,
volume = 349,
pages = {239--250},
doi = {10.1016/j.cam.2018.07.051}
}
@inproceedings{espadoto:2019:ivapp, title = {Visual Analytics of Multidimensional Projections for Constructing Classifier Decision Boundary Maps}, author = {M. Espadoto and F. C. M. Rodrigues and A. Telea}, booktitle = {Proc. IVAPP}, year = 2019, publisher = {SCITEPRESS} }
@Article{Tang:2019:IEC,
author={T. Tang and S. Rubab and J. Lai and W. Cui and L. Yu and Y. Wu},
journal={IEEE Transactions on Visualization and Computer Graphics},
title={iStoryline: Effective Convergence to Hand-drawn Storylines},
year={2019},
volume={25},
number={1},
pages={769-778},
keywords={Visualization;Layout;Tools;Motion pictures;Optimization methods;Guidelines;Hand-drawn illustrations;automatic layout;design space;interactions;optimization},
doi={10.1109/TVCG.2018.2864899},
ISSN={1077-2626},
month={Jan}
}
@Article{ji:2019:CGF,
author = {Ji, Chengtao and Gronde, Jasper J. van de and Maurits, Natasha M. and Roerdink, Jos B. T. M},
title = {Visual Exploration of Dynamic Multichannel EEG Coherence Networks},
journal = {Computer Graphics Forum},
volume = {38},
number = {1},
pages = {507--520},
year = {2019},
url = {https://doi.org/10.1111/cgf.13588}
}
% 2018
@Article{VeKo18,
author = {Verstraaten, T.W. and Kosinka, J.},
title = {Local and Hierarchical Refinement for Subdivision Gradient Meshes},
journal = {Computer Graphics Forum},
year = 2018,
volume = 37,
pages = {373--383},
doi = {10.1111/cgf.13575}
}
@Article{BaBaKo18,
author = {Barendrecht, P. and Barton, M. and Kosinka, J.},
title = {Efficient quadrature rules for subdivision surfaces in isogeometric analysis},
journal = {Computer Methods in Applied Mechanics and Engineering},
year = 2018,
volume = 340,
pages = {1--23},
doi = {10.1016/j.cma.2018.05.017}
}
@Article{BiLaVrKo18,
author = {Bizzarri, M. and Lavicka, M. and Vrsek, J. and Kosinka, J.},
title = {A direct and local method for computing polynomial Pythagorean-normal patches with global G1 continuity},
journal = {Computer-Aided Design},
year = 2018,
volume = 102,
pages = {44--51},
doi = {10.1016/j.cad.2018.04.013}
}
@Article{DuKo18,
author = {Duro Reis, J.P. and Kosinka, J.},
title = {Injective hierarchical free-form deformations using THB-splines},
journal = {Computer-Aided Design},
year = 2018,
volume = 100,
pages = {30--38},
doi = {10.1016/j.cad.2018.02.005}
}
@Article{BaLuHoKo18,
author = {Barendrecht P.J. and Luinstra, J. and Hogervorst, J. and Kosinka, J.},
title = {Locally refinable gradient meshes supporting branching and sharp colour transitions},
journal = {The Visual Computer},
year = 2018,
volume = 34,
number = 6--8,
pages = {949--960},
doi = {10.1007/s00371-018-1547-1}
}
@phdthesis{Zwan:2018:thesis
author = {Matthew van der Zwan},
title = {Visual Analytics of Multidimensional Time-dependent Trails},
school = {University of Groningen},
year = {2018},
month = {October~5},
url = {http://www.cs.rug.nl/~alext/PAPERS/PhD/zwan18.pdf}
}
@PhdThesis{ji18:_visual_explor_multic_eeg_coher_networ,
author = {Ji, Chengtao},
title = {Visualization and Exploration of Multichannel EEG Coherence Networks},
school = {University of Groningen},
year = 2018,
month = {October~15},
address = {University of Groningen, The Netherlands},
note = {Promotor: J. B. T. M. Roerdink, N. M. Maurits},
url = {http://hdl.handle.net/11370/5cefd201-7e49-4912-a718-cc8e9f2a1d9b},
annote = {Funded by Conacyt}
}
@PhdThesis{soancatl18:_visual_analy_quant_asses_human_movem,
author = {Soancatl~Aguilar, Venustiano},
title = {Visual Analysis and Quantitative Assessment of Human Movement},
school = {University of Groningen},
year = 2018,
month = {March~19},
address = {University of Groningen, The Netherlands},
note = {Promotor: J. B. T. M. Roerdink, N. M. Maurits, copromotor: C. J. C. Lamoth},
url = {http://hdl.handle.net/11370/26481da2-8b5e-4f02-a141-908aaf5c9949},
annote = {Funded by Conacyt}
}
@inproceedings{depiano:vsmm:poster, title = {Virtual Reality Platform To Assess Air Traffic Controllers Performance In Control Tower Operations}, author = {R. De Piano and A. Ferreira and S. Pozzi and M. Terenzi and V. Betti and E. Pavone and M. Marucci and P. Arico and G. Borghini and G. Di Flumeri and N. Sciaraffa and F. Babiloni and S. Aglioti and C. Hurter and R. Benhacene and C. Clercq and M. Reynal and A. Telea and J. Kruiger}, booktitle = {Proc. VSMM}, year = 2018 }
@article{garcia:2018:cag, title = {A Task-and-Technique Centered Survey on Visual Analytics for Deep Learning Model Engineering}, author = {R. Garcia and A. Telea and B. da Silva and J. Torresen and J. Comba}, journal = {Computers and Graphics}, volume = 77, year = 2018, pages = {30-49}, publisher = {Elsevier} }
@inproceedings{telea:2018:gd, title = {Image-Based Graph Visualization: Advances and Challenges}, author = {A. Telea}, booktitle = {Proc. Graph Drawing}, year = 2018, publisher = {Springer} }
@inproceedings{vernier:2018:vissoft, title = {Quantitative Comparison of Dynamic Treemaps for Software Evolution Visualization}, author = {E. F. Vernier and J. Comba and A. Telea}, booktitle = {Proc. IEEE VISSOFT}, year = 2018 }
@inproceedings{rodrigues:2018:sibgrapi, title = {Image-based Visualization of Classifier Decision Boundaries}, author = {F. C. M. Rodrigues and R. Hirata Jr. and A. Telea}, booktitle = {Proc. SIBGRAPI}, year = 2018 }
@inproceedings{vernier:2018:sibgrapi, title = {A Stable Greedy Insertion Treemap Algorithm for Software Evolution Visualization}, author = {E. F. Vernier and J. Comba and A. Telea}, booktitle = {Proc. SIBGRAPI}, year = 2018 }
@inproceedings{benato:2018:sibgrapi, title = {Semi-Supervised Learning with Interactive Label Propagation guided by Feature Space Projections}, author = {B. Benato and A. Telea and A. Falcao}, booktitle = {Proc. SIBGRAPI}, year = 2018 }
@article{traore:2018:vis, title = {Interactive obstruction-free lensing for volumetric data visualization}, author = {M. Traore and C. Hurter and A. Telea}, journal = {IEEE TVCG}, year = 2018 }
@article{telea:2018:mdpi, title = {Editorial for Special Issue on IVAPP 2018 selected papers}, author = {A. Telea and A. Kerren}, journal = {Informatics}, volume = 9, number = 7, publisher = {MDPI}, year = 2018 }
@inproceedings{kustra:2018:dsh, title = {Visual Analytics for Classifier Construction and Evaluation for Medical Data}, author = {J. Kustra and A. Telea}, booktitle = {Data Science for Healthcare}, publisher = {Springer}, year = 2018 }
@article{staron:2018:ist, title = {Special Section on Visual Analytics in Software Engineering}, author = {M. Staron and H. Sahraoui and A. Telea}, journal = {Information and Software Technology}, volume = 98, year = 2018 }
@inproceedings{arico:2018:ebmc, title = {Human-Machine Interaction Assessment by Neurophysiological Measures: A Study on Professional Air Traffic Controllers}, author = {P. Arico and M. Reynal and J. Imbert and C. Hurter and G. Borghini and G. Di Flumeri and N. Sciaraffa and A. Di Florio and M. Terenzi and A. Ferreira and S. Pozzi and V. Betti and M. Marucci and E. Pavone and A. Telea and F. Babiloni}, booktitle = {Proc. 40th IEEE International Engineering in Medicine and Biology Conference (EBMC)}, year = 2018 }
@book{telea:2018:3dor, title = {Proceedings of Eurographics Workshop on 3D Object Retrieval (3DOR 2018)}, author = {A. Telea and T. Theoharis}, publisher = {Eurographics}, year = 2018 }
@book{telea:2018:egtut, title = {Proceedings of Eurographics Tutorials 2018}, author = {T. Ritschel and A. Telea}, publisher = {Eurographics}, year = 2018 }
@inproceedings{telea:2018:sage, title = {Data visualization methods}, author = {A. Telea}, booktitle = {SAGE Encyclopedia of Educational Research, Measurement, and Evaluation}, publisher = {SAGE Publ.}, year = 2018, pages = {461-464} }
@inproceedings{borodaev:2018:nexta, title = {Software metrics for policy-driven software development life cycle automation}, author = {L. Borodaev and R. Smedinga and A. Telea and R. Groenboom}, booktitle = {Proc. IEEE NEXTA}, year = 2018 }
@phdthesis{Chengtao:2018:VEM,
author = {Chengtao Ji},
title = {Visualization and exploration of multichannel EEG coherence networks},
school = {University of Groningen},
year = {2018},
url = {http://hdl.handle.net/11370/5cefd201-7e49-4912-a718-cc8e9f2a1d9b}
}
@inproceedings {ji:2018:VCBM,
author = {Chengtao Ji and
Natasha M. Maurits and
Jos B. T. M. Roerdink},
editor = {Anna Puig and
Thomas Schultz and
Anna Vilanova and
Ingrid Hotz and
Barbora Kozl{\'{\i}}kov{\'{a}} and
Pere{-}Pau V{\'{a}}zquez},
title = {Visual Analysis of Evolution of {EEG} Coherence Networks employing
Temporal Multidimensional Scaling},
booktitle = {{VCBM} 18: Eurographics Workshop on Visual Computing for Biology and
Medicine, Granada, Spain, September 20-21, 2018},
pages = {95--99},
publisher = {Eurographics Association},
year = {2018},
url = {https://doi.org/10.2312/vcbm.20181233}
}
@inproceedings {ji:2018:CCN, author = {Chengtao Ji and
Natasha M. Maurits and
Jos B. T. M. Roerdink},
editor = {Luca Maria Aiello and
Chantal Cherifi and
Hocine Cherifi and
Renaud Lambiotte and
Pietro Li{\'{o}} and
Luis M. Rocha},
title = {Comparison of Brain Connectivity Networks Using Local Structure Analysis},
booktitle = {Complex Networks and Their Applications {VII} - Volume 2 Proceedings
The 7th International Conference on Complex Networks and Their Applications
{COMPLEX} {NETWORKS} 2018},
series = {Studies in Computational Intelligence},
volume = {813},
pages = {639--651},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-030-05414-4\_51}
}
@Article{ji:2018:APNS,
author = {Ji, Chengtao and Maurits, Natasha M. and Roerdink, Jos B. T. M},
title = {Data-Driven Visualization of Multichannel EEG Coherence Networks Based on Community Structure Analysis},
journal = {Applied Network Science},
year ={2018},
volume={3}, number={1}, doi={https://doi.org/10.1007/s41109-018-0096-x} }
@Article{yang18:_improv_utilit_gpu_accel_indus,
author = {Po Yang and Feng Dong and Valeriu Codreanu and David
Williams and Jos B. T. M. Roerdink and Baoquan Liu
and A. Anvari-Moghaddam and G. Min},
title = {Improving Utility of {GPU} in Accelerating
Industrial Applications with User-centred Automatic
Code Translation},
journal = {IEEE Trans.\ Industrial Informatics},
year = 2018,
volume = 14,
number = 4,
pages = {1347-1360},
doi = {http://dx.doi.org/10.1109/TII.2017.2731362}
}
@inproceedings {VSBIDshort18,
author = {Lorenzo Amabili and
Jir{\'{\i}} Kosinka and
Maarten A. J. van Meersbergen and
Peter M. A. van Ooijen and
Jos B. T. M. Roerdink and
Pjotr Svetachov and
Lingyun Yu},
editor = {Jimmy Johansson and
Filip Sadlo and
Tobias Schreck},
title = {Improving Provenance Data Interaction for Visual Storytelling in Medical
Imaging Data Exploration},
booktitle = {Eurographics Conference on Visualization, EuroVis 2018, Short Papers,
Brno, Czech Republic, 4-8 June 2018},
pages = {43--47},
publisher = {Eurographics Association},
year = {2018},
url = {https://doi.org/10.2312/eurovisshort.20181076}
}
@inproceedings {egs.20181039, booktitle = {EG 2018 - Short Papers}, title = {{Smooth Blended Subdivision Shading}}, author = {Bakker, Jelle and Barendrecht, Pieter J. and Kosinka, Jiri}, year = {2018}, publisher = {The Eurographics Association}, ISSN = {1017-4656}, DOI = {10.2312/egs.20181039} }
@inproceedings {egs.20181041, booktitle = {EG 2018 - Short Papers}, title = {{A Comparison of GPU Tessellation Strategies for Multisided Patches}}, author = {Hettinga, Gerben Jan and Barendrecht, Pieter J. and Kosinka, Jiri}, year = {2018}, publisher = {The Eurographics Association}, ISSN = {1017-4656}, DOI = {10.2312/egs.20181041} }
@article{HETTINGA2018, title = "Multisided generalisations of Gregory patches", journal = "Computer Aided Geometric Design", year = "2018", issn = "0167-8396", doi = "https://doi.org/10.1016/j.cagd.2018.03.005", url = "http://www.sciencedirect.com/science/article/pii/S0167839618300190", author = "Gerben J. Hettinga and Jiri Kosinka" }
@article{Amabili:2018:ICTOPEN, author = {L. Amabili and F.H.J. van Hoesel and T. Klaver and J. Kosinka and L. Yu and M. van Meersbergen and A. Mendrik and P.M.A. van Ooijen
and J.B.T.M. Roerdink and P. Svetachov},
journal = {ICT.OPEN: The Conference for ICT-Research in the Netherlands}, title = {{Visual Storytelling for Informed Decision-Making in Medicine}}, url = {http://www.cs.rug.nl/~jiri/papers/18ICTopen.pdf}, year = {2018} }
@article {Cai:2018:ASE, author = {Cai, X. and Efstathiou, K. and Xie, X. and Wu, Y. and Shi, Y. and Yu, L.}, title = {A Study of the Effect of Doughnut Chart Parameters on Proportion Estimation Accuracy}, journal = {Computer Graphics Forum}, issn = {1467-8659}, year = {2018}, url = {http://dx.doi.org/10.1111/cgf.13325}, doi = {10.1111/cgf.13325} }
% 2017
@article{Amabili:2017:VSBID, author = {L. Amabili and W. van Hage and F.H.J. van Hoesel and J. Kosinka and L. Yu and M. van Meersbergen and P.M.A. van Ooijen
and J.B.T.M. Roerdink and P. Svetachov},
journal = {National eScience Symposium 2017: Science in a Digital World}, title = {{Visual Storytelling of Big Imaging Data}}, url={http://www.cs.rug.nl/~jiri/papers/17eScience.pdf}, year = {2017} }
@article{Soancatl:2017:ADPA, author = {Soancatl Aguilar, Venustiano and Lamoth, Claudine J. C. and
Maurits, Natasha M. and Roerdink, Jos B. T. M.},
journal = {Gait \& Posture}, year = {2018}, volume={60}, number={1}, pages={235--240}, title = {{Assessing Dynamic Postural Control During Exergaming in
Older Adults: a Probabilistic Approach}},
doi={10.1016/j.gaitpost.2017.12.015} }
@Inbook{Guo:2017:ANM, author={Jiechang Guo and Yigang Wang and Peng Du and Yu, Lingyun}, editor={Jian Chang and Jian Jun Zhang and Nadia Thalmann Magnenat and Shi-Min Hu and Ruofeng Tong and Wencheng Wang}, title={A Novel Multi-touch Approach for 3D Object Free Manipulation}, bookTitle={Next Generation Computer Animation Techniques: Third International Workshop, AniNex 2017, Bournemouth, UK, June 22-23, 2017, Revised Selected Papers}, year={2017}, publisher={Springer International Publishing}, address={Cham}, pages={159--172}, isbn={978-3-319-69487-0}, doi={10.1007/978-3-319-69487-0_12}, url={http://doi.org/10.1007/978-3-319-69487-0_12} }
@proceedings{visapp16_selected, title = {Computer Vision, Imaging and Computer Graphics Theory and Applications -- VISIGRAPP 2016 Revised Selected Papers}, editor = {J. Braz and N, Magnenat-Thalmann and P. Richard and L. Linsen and A. Telea and S. Battiato and F. Imai}, publisher = {Springer}, year = 2017 }
@phdthesis{rauber17_phd, author = {Paulo E. Rauber},
title = {Visual Analytics Applied to Image Analysis -- From Segmentation to Classification},
school = {University of Groningen},
year = {2017},
url = {http://www.cs.rug.nl/~alext/PAPERS/PhD/rauber16.pdf}
}
@phdthesis{feng17_phd, author = {Cong Feng},
title = {Shape Segmentation and Retrieval Based on the Skeleton Cut Space},
school = {University of Groningen},
year = {2017},
url = {http://www.cs.rug.nl/~alext/PAPERS/PhD/fang17.pdf}
}
@article{kruiger17_informatics, title = {Multidimensional Data Exploration by Explicitly Controlled Animation}, author = {J. F. Kruiger and A. Hassoumi and H. J. Schulz and A. Telea and C. Hurter}, journal = {Informatics}, volume = 4, number = 3, year = 2017 }
@article{flores16_scagnostics, title = {Skeleton-based Scagnostics}, author = {J. A. M. Flores and L. Linsen and A. Telea}, journal = {IEEE TVCG}, doi = {10.1109/TVCG.2017.2744339}, year = 2017 }
@article{hurter16_func_decomp, title = {Functional Decomposition for Bundled Simplification of Trail Sets}, author = {C. Hurter and S. Puechmorel and F. Nicol and A. Telea}, journal = {IEEE TVCG}, year = 2017, doi = {10.1109/TVCG.2017.2744338} }
@inproceedings{falcao16_multiscale, title = {Multiscale {2D} medial axes and {3D} surface skeletons by the image foresting transform}, author = {A. Falcao and C. Feng and J. Kustra and A. Telea}, booktitle = {Skeletonization -- Theory, Methods, and Applications}, chapter = 2, editor = {P. Saha and G. Borgefors and G. S. di Baja}, publisher = {Elsevier}, year = 2017, iwicategory = {Chapter Book} }
@inproceedings{koehoorn17_unified, title = {Unified part-patch segmentation of mesh shapes using surface skeletons}, author = {J. Koehoorn and C. Feng and J. Kustra and A. Jalba and A. Telea}, booktitle = {Skeletonization -- Theory, Methods, and Applications}, chapter = 4, editor = {P. Saha and G. Borgefors and G. S. di Baja}, publisher = {Elsevier}, year = 2017, iwicategory = {Chapter Book} }
@article{rauber17_visual_aids, title = {Projections as Visual Aids for Classification System Design}, author = {P. Rauber and A. Falcao and A. Telea}, journal = {Information Visualization}, year = 2017, publisher = {SAGE Publ.}, doi = {10.1177/1473871617713337} }
@article{lhuillier17_star_bundling, title = {State of the Art in Edge and Trail Bundling Techniques}, author = {A. Lhuillier and C. Hurter and A. Telea}, journal = {CGF}, volume = 36, number = 3, pages = {619-645}, year = 2017 }
@proceedings{egpgv17, title = {Proceedings of the 17th Eurographics Symposium on Parallel Graphics and Visualization (EGPGV)}, editor = {J. Bennett and A. Telea}, publisher = {Eurographics}, year = 2017 }
@inproceedings{vernier17_treemaps, title = {Quantitative Comparison of Treemap Techniques for Time-Dependent Hierarchies}, author = {E. Vernier and J. Comba and A. Telea}, booktitle = {Proc. EuroVis -- posters}, year = 2017, publisher = {Eurographics}, note = {Best poster award} }
@inproceedings{kruiger17_pnield, title = {Projection Navigation In Extremely Large Datasets (PNIELD)}, author = {J. Kruiger and A. Telea and C. Hurter}, booktitle = {Proc. EuroVis -- posters}, year = 2017, publisher = {Eurographics} }
@inproceedings{martins17_mvnreduce, title = {{MVN-Reduce}: Dimensionality Reduction for the Visual Analysis of Multivariate Networks}, author = {R. Martins and J. Kruiger and R. Minghim and A. Telea and A. Kerren}, booktitle = {Proc. EuroVis -- short papers}, year = 2017, publisher = {Eurographics} }
@article{kruiger17_tsnet, title = {Graph Layouts by {t-SNE}}, author = {J. Kruiger and R. Martins and P. Rauber and A. Kerren and S. Kobourov and A. Telea}, journal = {CGF}, volume = 36, number = 3, pages = {283-294}, year = 2017 }
@proceedings{visapp17, title = {Proceedings of the 11th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications (VISIGRAPP'17)}, editor = {J. Braz and A. Claudio and P. Richard and T. Yamaguchi and L. Linsen and A. Telea and F. Imai and A. Tremeau}, publisher = {SCITEPRESS}, year = 2017 }
@inproceedings{lhuillier17_ffteb, title = {{FFTEB}: Edge Bundling of Huge Graphs by the Fast Fourier Transform}, author = {A. Lhuillier and C. Hurter and A. Telea}, booktitle = {Proc. PacificVis}, publisher = {IEEE}, year = 2017 }
@article{b81366d0ff6c4b8d88f73cdc4c095ccc,
title = "A Colour Interpolation Scheme for Topologically Unrestricted Gradient Meshes", keywords = "colour interpolation, subdivision surface, gradient mesh", author = "Henrik Lieng and Jiri Kosinka and Jingjing Shen and Neil Dodgson", year = "2017", doi = "10.1111/cgf.12862", volume = "36", pages = "112--121", journal = "COMPUTER GRAPHICS FORUM", issn = "0167-7055", number = "6",
}
@article{8a2275494a6a449d9c4aa11ff5239c1a,
title = "Discretizing Wachspress kernels is safe", author = "Kai Hormann and Jiri Kosinka", year = "2017", doi = "10.1016/j.cagd.2017.02.015", volume = "52-53", pages = "126--134", journal = "Computer aided geometric design", issn = "0167-8396", publisher = "North-Holland Publishing Company",
}
@article{564e2c649607487bbfe211ee0fd3b015,
title = "Skinning and blending with rational envelope surfaces", author = "Michal Bizzarri and Miroslav Lávicka and Jiri Kosinka", year = "2017", doi = "10.1016/j.cad.2017.02.002", volume = "87", pages = "41--51", journal = "Computer-Aided design", issn = "0010-4485", publisher = "Elsevier",
}
@article{79252cfb7564421abeafadf520d76cd8,
title = "Towards optimal advection using stretch-maximizing stream surfaces", author = "Michael Barton and Jiri Kosinka", year = "2017", doi = "10.1016/j.cagd.2017.02.010", volume = "52-53", pages = "3--12", journal = "Computer aided geometric design", issn = "0167-8396", publisher = "North-Holland Publishing Company",
}
@inproceedings {ji:2017:CCN,
author = {Chengtao Ji and
Natasha M. Maurits and
Jos B. T. M. Roerdink},
editor = {Chantal Cherifi and
Hocine Cherifi and
M{\'{a}}rton Karsai and
Mirco Musolesi},
title = {Visualization of Multichannel {EEG} Coherence Networks Based on Community
Structure Analysis},
booktitle = {Complex Networks {\&} Their Applications {VI} - Proceedings of
Complex Networks 2017 (The Sixth International Conference on Complex
Networks and Their Applications), {COMPLEX} {NETWORKS} 2017, Lyon,
France, November 29 - December 1, 2017},
series = {Studies in Computational Intelligence},
volume = {689},
pages = {583--594},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-72150-7\_47}
}
@inproceedings {ji:2017:VCBM,
author = {Chengtao Ji and
Jasper J. van de Gronde and
Natasha M. Maurits and
Jos B. T. M. Roerdink},
title = {Visualizing and Exploring Dynamic Multichannel {EEG} Coherence Networks},
booktitle = {{VCBM} 17: Eurographics Workshop on Visual Computing for Biology and
Medicine, Bremen, Germany, September 7-8, 2017},
pages = {63--72},
publisher = {Eurographics Association},
year = {2017},
url = {https://doi.org/10.2312/vcbm.20171238},
doi = {10.2312/vcbm.20171238},
note = {Honorable Mention Award}
}
@article{Soancatl:2017:APC, author = {Soancatl Aguilar, Venustiano and van de Gronde, Jasper
J. and Lamoth, Claudine J. C. and Maurits, Natasha
M. and Roerdink, Jos B. T. M.},
journal = {IEEE Transactions on Neural
Systems and Rehabilitation Engineering},
pages = {171--180}, title = {{Assessing Postural Control Performance during Exergaming
based on Speed and Curvature of Body Movements}},
number ={26}, volume = {1}, doi = {https://doi.org/10.1109/TNSRE.2017.2769701}, year = {2018}, pdf = {TNSRE2769701-2.pdf} }
@inproceedings {HettingaKosinka:2017:PTPN,
booktitle = {EG 2017 - Short Papers},
title = {{Phong Tessellation and PN Polygons for Polygonal Models}},
author = {Hettinga, Gerben J. and Kosinka, Jiri},
year = {2017},
publisher = {The Eurographics Association},
ISSN = {1017-4656},
url = {http://www.cs.rug.nl/~jiri/papers/17HeKo.pdf}
DOI = {10.2312/egsh.20171012}
}
@Article{punzo17:_slicer, author = {D. Punzo and J.M. van der Hulst and J.B.T.M. Roerdink and J.C. Fillion-Robin and L. Yu}, title = {{SlicerAstro}: A {3-D} interactive visual analytics tool for {HI} data}, journal = {Astronomy and Computing}, volume = {19}, pages = {45 - 59}, year = {2017}, issn = {2213-1337}, doi = {https://doi.org/10.1016/j.ascom.2017.03.004}, url = {http://www.sciencedirect.com/science/article/pii/S2213133717300173} }
@InProceedings{ree17:_suppor_vector_compon_analy,
author = {Michiel van der Ree and
Jos B. T. M. Roerdink and
Christophe Phillips and
Ga{\"{e}}tan Garraux and
Eric Salmon and
Marco Wiering},
title = {Support vector components analysis},
booktitle = {25th European Symposium on Artificial Neural Networks, {ESANN} 2017,
Bruges, Belgium, April 26-28, 2017},
year = {2017},
url = {http://www.elen.ucl.ac.be/Proceedings/esann/esannpdf/es2017-63.pdf}
}
@article{Soancatl:2017:VDE, author = {Soancatl Aguilar, Venustiano and J. van de Gronde, Jasper and
J. C. Lamoth, Claudine and van Diest, Mike and M. Maurits,
Natasha and B. T. M. Roerdink, Jos},
doi = {10.1371/journal.pone.0170906}, editor = {Haddad, Jeffrey M}, journal = {PLOS ONE}, month = {jan}, number = {1}, pages = {e0170906}, publisher = {Public Library of Science}, title = {{Visual Data Exploration for Balance Quantification in Real-Time
During Exergaming}},
url = {http://dx.plos.org/10.1371/journal.pone.0170906}, volume = {12}, year = {2017} }
@InProceedings{hulst17:_3Dinteractivevis,
author = {J. M. van der Hulst and D. Punzo and
J. B. T. M. Roerdink},
title = {{3-D} interactive visualisation tools for {H\,I}
spectral line imaging},
booktitle = {Proceedings IAU Symposium No 325 Astroinformatics},
editor = {M. Brescia and G. Djorgovski and E. Feigelson and
G. Longo and S. Cavuoti},
year = 2017,
}
% 2016
@phdthesis{coimbra16_phd, author = {Danilo B. Coimbra},
title = {Multidimensional Projections for the Exploration of Multimedia Data},
school = {University of Groningen},
year = {2016},
url = {http://www.cs.rug.nl/~alext/PAPERS/PhD/coimbra16.pdf}
}
@phdthesis{dasilva16_phd, author = {Renato R. O. da Silva},
title = {Visualizing Multidimensional Data Similarities -- Improvements and Applications},
school = {University of Groningen},
year = {2016},
url = {http://www.cs.rug.nl/~alext/PAPERS/PhD/dasilva16.pdf}
}
@phdthesis{martins16_phd, author = {Rafael M. Martins},
title = {Explanatory Visualization of Multidimensional Projections},
school = {University of Groningen},
year = {2016},
url = {http://www.cs.rug.nl/~alext/PAPERS/PhD/martins16.pdf}
}
@phdthesis{sobiecki16_phd, author = {Andre Sobiecki},
title = {Skeletonization Methods for Image and Volume Inpainting},
school = {University of Groningen},
year = {2016},
url = {http://www.cs.rug.nl/~alext/PAPERS/PhD/sobiecki16.pdf}
}
@article{kustra16_features, title = {Computing Refined Skeletal Features from Medial Point Clouds}, author = {J. Kustra and A. Jalba and A. Telea}, journal = {Pattern Recognition Letters}, volume = {76}, number = {C}, pages = {13-21}, year = 2016 }
@inproceedings{dasilva16_ict, title = {Exploring Multidimensional Projections Through Explanatory Maps}, author = {R. da Silva and P. Rauber and R. Martins and R. Minghim and A. Telea}, booktitle = {Proc. ICT.OPEN, Amersfoort}, year = 2016 }
@inproceedings{delame16_skeletons, author = {T. Delame and J. Kustra and A. Telea}, title = {Structuring {3D} Medial Skeletons: A Comparative Study}, booktitle = {Proceedings Vision, Modeling, and Visualization (VMV)}, year = 2016, publisher = {Eurographics} }
@inproceedings{dasilva16_mem, title = {Metric Evolution Maps: Multidimensional Attribute-driven Exploration of Software Repositories}, author = {R. da Silva and E. Vernier and P. Rauber and J. Comba and R. Minghim and A. Telea}, booktitle = {Proceedings Vision, Modeling, and Visualization (VMV)}, year = 2016, publisher = {Eurographics} }
@article{dasilva16_cise, title = {Beyond the Third Dimension: Visualizing High-dimensional Data with Projections}, author = {R. da Silva and P. Rauber and A. Telea}, journal = {Computing in Science \& Engineering}, volume = 18, number = 5, pages = {98-107}, year = 2016, publisher = {IEEE} }
@Proceedings{eurovis2016,
title = {Proc. Eurographics/IEEE VGTC Conference on Visualization (EuroVis 2016), Groningen, The Netherlands, June 6-10, 2016},
editor = {J. Roerdink and K.-L. Ma and G. Santucci and J. van Wijk and R. Maciejewski and T. Ropinski and A. Vilanova and E. Bertini and N. Elmqvist and F. Sadlo and A. Telea},
year = {2016},
publisher = {CGF/Eurographics},
}
@proceedings{visapp16, title = {Proceedings of the 11th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications (VISIGRAPP'16)}, editor = {J. Braz and N. Magnenat-Thalmann and P. Richard and L. Linsen and A. Telea and S. Battiato and F. Imai}, publisher = {SCITEPRESS}, year = 2016 }
@article{tagliasacchi16_skeletons, title = {{3D} Skeletons: A State-of-the-Art Report}, author = {A. Tagliasacchi and T. Delame and M. Spagnuolo and N. Amenta and A. Telea}, journal = {CGF (Eurographics State-of-the-Art Reports)}, volume = {35}, number = 2, pages = {573-597}, year = 2016 }
@inproceedings{feng16_retrieval, title = {A descriptor for voxel shapes based on the skeleton cut space}, author = {C. Feng and A. Jalba and A. Telea}, booktitle = {Proc. {3D} Object Retrieval (3DOR)}, publisher = {Eurographics}, year = 2016 }
@article{koehoorn16_hair, title = {Efficient and Effective Automated Digital Hair Removal from Dermoscopy Images}, author = {J. Koehoorn and A. Sobiecki and P. Rauber and A. Jalba and A. Telea}, journal = {Math. Morphol. Theory Appl.}, volume = 1, publisher = {De Gruyter}, year = 2016 }
@article{feng16_improved_seg, title = {Improved Part-Based Segmentation of Voxel Shapes by Skeleton Cut Spaces}, author = {C. Feng and A. Jalba and A. Telea}, journal = {Math. Morphol. Theory Appl.}, volume = 1, publisher = {De Gruyter}, year = 2016 }
@inproceedings{sobiecki16_gap, title = {Robust Gap Removal from Binary Volumes}, author = {A. Sobiecki and A. Jalba and A. Telea}, booktitle = {Proc. Eurographics (short papers)}, publisher = {Eurographics}, year = 2016 }
@article{bfc50d8c29fa471a9e6cc4229dc1dd39,
title = "On the linear independence of truncated hierarchical generating systems", author = "Urska Zore and Bert Jüttler and Jiri Kosinka", year = "2016", month = "11", doi = "10.1016/j.cam.2016.04.014", volume = "306", pages = "200--216", journal = "Journal of Computational and Applied Mathematics", issn = "0377-0427", publisher = "North-Holland Publishing Company",
}
@article{858b1946ac8c415b9fa9f9a97cff0cd6,
title = "How well do saliency-based features perform for shape retrieval?", author = "Flora Ponjou Tasse and Jiri Kosinka and Neil Dodgson", year = "2016", month = "10", doi = "10.1016/j.cag.2016.04.003", volume = "59", pages = "57--67", journal = "Computers & graphics-Uk", issn = "0097-8493", publisher = "Pergamon Press",
}
@article{a086795fe8014931b0f17a11f4c2a254,
title = "Medial axis transforms yielding rational envelopes", author = "Michal Bizzarri and Miroslav Lávicka and Jiri Kosinka", year = "2016", month = "8", doi = "10.1016/j.cagd.2016.05.006", volume = "46", pages = "92--102", journal = "Computer aided geometric design", issn = "0167-8396", publisher = "North-Holland Publishing Company",
}
@inbook{bc5c869445ec4e4391566e0cbbbc2e19,
title = "An Evaluation of Local Feature Encodings for Shape Retrieval", author = "Flora Ponjou Tasse and Jiri Kosinka and Neil Dodgson", year = "2016", doi = "10.2312/3dor.20161085", isbn = "978-3-03868-004-8", booktitle = "3DOR", publisher = "Eurographics (European Association for Computer Graphics)",
}
@article{f254b42787f64c98b0a94e7f58ad1615,
title = "Can local NURBS refinement be achieved by modifying only the user interface?", author = "Neil Dodgson and Jiri Kosinka", year = "2016", doi = "10.1016/j.cad.2015.09.006", volume = "71", pages = "28--38", journal = "Computer-Aided design", issn = "0010-4485", publisher = "Elsevier",
}
@article{9b3773549ec54664aa902ba457313677,
title = "Convergence of barycentric coordinates to barycentric kernels", author = "Jiri Kosinka and Michael Barton", year = "2016", doi = "10.1016/j.cagd.2016.02.003", volume = "43", pages = "200--210", journal = "Computer aided geometric design", issn = "0167-8396", publisher = "North-Holland Publishing Company",
}
@article{a4a2ef606fa84936b17731490824a1a2,
title = "Converting a CAD model into a non-uniform subdivision surface", author = "Jingjing Shen and Jiri Kosinka and Malcolm Sabin and Neil Dodgson", year = "2016", doi = "10.1016/j.cagd.2016.07.003", journal = "Computer aided geometric design", issn = "0167-8396", publisher = "North-Holland Publishing Company",
}
@inbook{0fa904d2347f46a9808ce86e49cf2abd,
title = "Quantitative Analysis of Saliency Models", author = "Flora Ponjou Tasse and Jiri Kosinka and Neil Dodgson", year = "2016", doi = "10.1145/3005358.3005380", isbn = "978-1-4503-4541-5/16/12", booktitle = "SIGGRAPH ASIA 2016 Technical Briefs", publisher = "ACM Press Digital Library",
}
@InProceedings{valentijn16:_target_astro_wise_data,
author = {Valentijn, E. A., and Begeman, K., and Belikov, A.,
and Boxhoorn, D. R., and Brinchmann, J., and
McFarland, J., and Holties, H., and Kuijken, K. H.,
and Verdoes Kleijn, G., and Vriend, W-J., and
Williams, O. R., and Roerdink, J. B. T. M., and
Schomaker, L. R. B., and Swertz, M. A., and
Tsyganov, A., and van Dijk, G. J. W.},
title = {Target and {(Astro-)WISE} technologies - {Data}
federations and its applications},
booktitle = {Proceedings IAU Symposium No 135 Astroinformatics},
year = 2016,
month = {Dec 1},
note = {arXiv http://arxiv.org/abs/1612.05996}
}
@InProceedings{biehl16:_class_fdg_pet_brain_data,
author = {M. Biehl and D. Mudali and K. L. Leenders and
J. B. T. M. Roerdink},
title = {Classification of {FDG-PET} Brain Data by
Generalized Matrix Relevance {LVQ}},
booktitle = {BrainComp 2015},
year = 2016,
series = {LNCS 10087},
pages = {131-141},
DOI = {10.1007/978-3-319-50862-7 10},
url =
{http://link.springer.com/chapter/10.1007/978-3-319-50862-7_10}
}
@Article{mudali16:_differ_early_late_stage_parkin,
author = {D. Mudali and M. Biehl and S. K. Meles and
R. J. Renken and D. García-García and P. Clavero and
J. Arbizu and J. A. Obeso and M. C. Rodriguez-Oroz and
K. L. Leenders and J. B. T.M. Roerdink},
title = {Differentiating Early and Late Stage {Parkinson's}
Disease Patients from Healthy Controls},
journal = {Journal of Biomedical Engineering and Medical
Imaging},
year = 2016,
volume = 3,
number = 6,
year = 2016,
doi = {http://dx.doi.org/10.14738/jbemi.36.2280}
}
@Article{punzo16:_findin_hi,
author = {Punzo, D. and van~der~Hulst, J. M. and Roerdink,
J. B. T. M.},
title = {Finding faint HI structure in and around galaxies:
scraping the barrel},
journal = {Astronomy and Computing},
year = 2016,
volume = 17,
month = oct,
pages = {163–176}
}
@Article{Rauber:2016:VHA,
title = {Visualizing the Hidden Activity of Artificial Neural Networks},
author = {Rauber, Paulo E. and Fadel, Samuel G. and Falcao,
Alexandre X. and Telea, Alexandru C.},
year = {2017},
month = {January},
journal = {IEEE Transactions on Visualization and Computer Graphics (Proceedings of the Visual Analytics Science and Technology 2016)},
volume = {23},
number = {01},
}
@Article{yang16:_gswo,
author = {Yang, P and Clapworthy, G and Dong, F and Codreanu,
VB and Williams, DP and Liu, BQ and Roerdink, JBTM
and Deng, ZK},
title = {{GSWO}: A Programming Model for {GPU}-enabled
Parallelization of Sliding Window Operations in
Image Processing},
journal = {Signal Processing: Image Communication},
year = 2016,
volume = 47,
pages = {332–345},
doi = { http://dx.doi.org/10.1016/j.image.2016.05.003}
}
@inproceedings{Soancatl:2016:CSB,
author = {Soancatl Aguilar, Venustiano and van de Gronde, Jasper J. and Maurits, Natasha M. and Lamoth, Claudine C. J. C. and Roerdink, Jos B. T. M.},
title = {Curvature and Speed for Balance Quantification During Exergaming},
booktitle = {Proceedings of the 9th International Conference on Motion in Games},
series = {MIG '16},
year = {2016},
isbn = {978-1-4503-4592-7},
location = {Burlingame, California},
pages = {201--202},
numpages = {2},
url = {http://doi.acm.org/10.1145/2994258.2996375},
doi = {10.1145/2994258.2996375},
acmid = {2996375},
publisher = {ACM},
address = {New York, NY, USA},
keywords = {balance quantification, curvature, speed, two-level linear mixed models},
}
@inproceedings{Soancatl:2016:BQE,
address = {Groningen},
author = {Soancatl Aguilar, Venustiano and van de Gronde, J. J. and
Lamoth, C. J. C. and Maurits, N. M. and Roerdink,
Jos B. T. M.},
booktitle = {EuroVis 2016 - Posters},
url = {http://dx.doi.org/10.2312/eurp.20161133},
doi = {10.2312/eurp.20161133},
isbn = {978-3-03868-015-4},
pages = {25--27},
publisher = {The Eurographics Association},
title = {{Visual Data Exploration for Balance Quantification
During Exergaming}},
year = 2016
}
@InProceedings{Chengtao:2016:VTD,
author = {Ji, Chengtao and van de Gronde, Jasper J. and
Maurits, Natasha M. and Roerdink, Jos B. T. M.},
title = {Tracking and Visualizing Dynamic Structures in
Multichannel EEG Coherence Networks},
booktitle = {EuroVis 2016 - Posters},
url = {http://dx.doi.org/10.2312/eurp.20161134},
doi = {10.2312/eurp.20161134},
isbn = {978-3-03868-015-4},
pages = {28--30},
publisher = {The Eurographics Association},
year = 2016
}
@InProceedings{Chengtao:2016:CCS,
author = {Ji, Chengtao and van de Gronde, Jasper J. and
Maurits, Natasha M. and Roerdink, Jos B. T. M.},
title = {Exploration of Complex Dynamic Structures in Multichannel EEG Coherence Networks via Information Visualization Techniques},
booktitle = {CCS 2016 - Posters},
year = 2016
}
@INPROCEEDINGS{Silva:2016:EMP,
title = {{Exploring Multidimensional Projections Through Explanatory Maps}},
author = {Silva, Renato R. O. da and Rauber, Paulo E. and Martins, Rafael M. and Minghim, Rosane and Telea, Alexandru C.},
booktitle = {Poster session of the National ICT.OPEN (Amersfoort)},
year = {2016},
month = mar,
pdf = {RenatoSilva_2016_ICTOPen.pdf}
}
@InProceedings{Rauber:2016:VTD,
author = {Rauber, Paulo E. and Falcão, Alexandre X. and Telea, Alexandru C.},
title = {Visualizing Time-Dependent Data Using Dynamic t-SNE},
booktitle = {EuroVis Short Papers},
year = {2016},
}
@article{Gronde:2016:ERP,
author = {van de Gronde, Jasper J. and Offringa, André R. and Roerdink, Jos B. T. M.},
title = {Efficient and Robust Path Openings using the Scale-Invariant Rank Operator},
journal = {Journal of Mathematical Imaging and Vision},
year = {2016},
volume = {56},
number = {3},
pages = {455--471},
doi = {10.1007/s10851-016-0649-5},
pdf = {Gronde2016ERP.pdf},
url = {http://bit.ly/1OcSZUP},
issn = {1576-7683}
}
@Article{williams16:_visual_decis_tree_state_class_parkin_diseas,
author = {David Williams and Deborah Mudali and Hugo
Buddelmeijer and Parisa Noorishad and Sanne Meles
and Remco Renken and Nico Leenders and Edwin
Valentijn and Jos Roerdink},
title = {Visualization of Decision Tree State for the
Classification of Parkinson's Disease},
journal = {Journal of Biomedical Engineering and Medical
Imaging},
volume = 3,
number = 3,
year = 2016,
keywords = {Decision tree; Visualization; Medical imaging;
Parkinson's Disease; Computer aided diagnosis;},
abstract = {Decision trees have been shown to be effective at
classifying subjects with Parkinson's disease when
provided with features (subject scores) derived from
FDG-PET data. Such subject scores have strong
discriminative power but are not intuitive to
understand. We therefore augment each decision node
with thumbnails of the principal component (PC)
images from which the subject scores are computed,
and also provide labeled scatter plots of the
distribution of scores. These plots allow the
progress of individual subjects to be traced through
the tree and enable the user to focus on complex or
unexpected classifications. In addition, we present
a visual representation of a typical brain activity
pattern arriving at each leaf node, and show how
this can be compared to a known reference to
validate the behaviour of the tree.},
pages = 25,
doi = {10.14738/jbemi.33.1858},
url = {http://scholarpublishing.org/index.php/JBEMi/article/view/1858}
}
@article{Zwan:2016:CUB,
author={M. van der Zwan and V. Codreanu and A. Telea},
journal={IEEE Transactions on Visualization and Computer Graphics},
title={{CUBu}: Universal real-time bundling for large graphs},
year={2016},
volume={22},
number={12},
pages={2250-2263},
keywords={Electron tubes;Graphics processing units;Image edge detection;Kernel;Real-time systems;Scalability;Scattering;Computer Graphics–Methodology and Techniques;Computer Graphics–Picture/Image Generation;I.3.3 [Computing Methodologies];I.3.6 [Computing Methodologies]:},
doi={10.1109/TVCG.2016.2515611},
ISSN={1077-2626},
}
@incollection{mudali16:_lvq_svm_class_fdg_pet_brain_data,
year = 2016,
isbn = {978-3-319-28517-7},
booktitle = {Advances in Self-Organizing Maps and Learning Vector
Quantization},
volume = 428,
series = {Advances in Intelligent Systems and Computing},
author = {Deborah Mudali and Michael Biehl and Klaus L. Leenders
and Jos B. T. M. Roerdink},
editor = {Mer\'enyi, Erzs\'ebet and Mendenhall, Michael J. and
O'Driscoll, Patrick},
title = {{LVQ} and {SVM} Classification of {FDG-PET} Brain
Data},
doi = {http://dx.doi.org/10.1007/978-3-319-28518-4_18},
publisher = {Springer International Publishing},
keywords = {Learning Vector Quantization; Support Vector
Machine; Parkinsonian syndromes; Classification},
pages = {205-215}
}
@ARTICLE{Jalba:2015:PAMI, author={Jalba, A.C. and Sobiecki, A. and Telea, A.C.}, journal={Pattern Analysis and Machine Intelligence, IEEE Transactions on}, title={An Unified Multiscale Framework for Planar, Surface, and Curve Skeletonization}, year={2016}, volume={38}, number={1}, pages={30-45}, keywords={Computational modeling;Mathematical model;Measurement;Shape;Skeleton;Surface treatment;Three-dimensional displays;Medial axes;Physically;Skeleton regularization;based shape processing;physically-based shape processing;skeleton regularization}, doi={10.1109/TPAMI.2015.2414420}, ISSN={0162-8828}, month={Jan} }
@Article{Coimbra:2015:E3D,
Title = {{Explaining 3D Dimensionality Reduction Plots}},
Author = {Danilo Coimbra and Rafael Messias Martins and Fernando V. Paulovich and A. C. Telea},
Journal = {Information Visualization},
volume = 15,
number = 2,
pages = {154-172},
publisher = {SAGE Publ.},
Year = {2016},
doi = {http://dx.doi.org/10.1177/1473871615600010}
}
@article{Yu:2016:CAST, title = {CAST: Effective and Efficient User Interaction for Context-Aware Selection in 3D Particle Clouds}, author = {Lingyun Yu and Konstantinos Efstathiou and Petra Isenberg and Tobias Isenberg}, year = {2016}, month = {1}, doi = {10.1109/TVCG.2015.2467202}, volume = {22}, pages = {886--895}, journal = {IEEE transactions on visualization and computer graphics}, issn = {1077-2626}, publisher = {IEEE Computer Society}, number = {1} }
% 2015 @phdthesis{kustra15_phd, author = {Jacek L. Kustra},
title = {Medial Descriptors for {3D} Shape Segmentation, Reconstruction, and Analysis},
school = {University of Groningen},
year = {2015},
url = {http://www.cs.rug.nl/~alext/PAPERS/PhD/kustra15.pdf}
}
@inproceedings{feng15_cutspace_ismm, title = {Part-Based Segmentation by Skeleton Cut Space Analysis}, author = {C. Feng, A. Jalba, A. Telea}, booktitle = {Proc. International Symposium on Mathematical Morphology (ISMM)}, year = 2015 }
@InProceedings{Martins:2015:ENP,
Title = {Explaining Neighborhood Preservation for Multidimensional Projections},
Author = {Rafael Messias Martins and Rosane Minghim and A. C. Telea},
Booktitle = {Proc. Computer Graphics \& Visual Computing (CGVC)},
Year = {2015},
Address = {London, United Kingdom},
Editor = {Rita Borgo and Cagatay Turkay},
Publisher = {Eurographics Association},
doi = {http://dx.doi.org/10.2312/cgvc.20151234},
note = {Best Student Paper Award}
}
@article{Gronde:2015:ECG,
author = {Schubert, Herman and van de Gronde, Jasper J. and Roerdink, Jos B. T. M.},
journal = {Mathematical Morphology - Theory and Applications},
volume = 1,
number = 1,
pages = {189-202},
publisher = {De Gruyter},
title = {Efficient Computation of Greyscale Path Openings},
year = {2016},
doi = {10.1515/mathm-2016-0010},
url = {http://bit.ly/1BTC2Je},
pdf = {Gronde_2015_ECG.pdf}
}
@article{Gronde:2015:GMS,
author = {van de Gronde, Jasper J. and Roerdink, Jos B. T. M.},
journal = {Mathematical Morphology - Theory and Applications},
publisher = {De Gruyter},
title = {Generalized Morphology using Sponges},
year = {2016},
doi = {10.1515/mathm-2016-0002},
url = {http://bit.ly/1Rz8SVp},
pdf = {Gronde_2015_GMS.pdf},
volume = 1,
number = 1,
pages = {18-41}
}
@Article{mike15:_quant_postur_contr_exerg_using,
author = {Mike van Diest and Jan Stegenga and Heinrich J. W\"ortche and Jos B. T. M. Roerdink and Gijsbertus J. Verkerke and Claudine J. C. Lamoth},
title = {Quantifying Postural Control during Exergaming Using
Multivariate Whole-Body Movement Data: A
Self-Organizing Maps Approach},
journal = {PLoS ONE},
year = 2015,
volume = 10,
number = 7,
pages = {e0134350},
doi = {http://dx.doi.org/10.1371/journal.pone.0134350}
}
@phdthesis{Gronde:2015:BSM,
author = {van de Gronde, Jasper J.},
title = {Beyond Scalar Morphology},
school = {University of Groningen},
year = {2015},
url = {http://hdl.handle.net/11370/a7296173-b2b9-4542-8c43-b2a6be7e60f5}
}
@InProceedings{Gronde:2015:TOS,
author = {van de Gronde, Jasper J.},
title = {Tensorial Orientation Scores},
series = {Lecture Notes in Computer Science},
editors = {Azzopardi, George and Petkov, Nicolai},
publisher = {Springer International Publishing},
booktitle = {Computer Analysis of Images and Patterns},
year = {2015},
volume = {9257},
pages = {783--794},
pdf = {Gronde_2015_TOS.pdf},
url = {http://bit.ly/1xc3OC3},
doi = {10.1007/978-3-319-23117-4_67}
}
@inproceedings {Silva:2015:AVE,
title = {{Attribute-based Visual Explanation of Multidimensional Projections}},
author = {Silva, Renato R. O. da and Rauber, Paulo E. and Martins, Rafael M. and Minghim, Rosane and Telea, Alexandru C.},
booktitle = {EuroVis Workshop on Visual Analytics (EuroVA)},
year = {2015},
publisher = {The Eurographics Association},
pdf = {Renato_2015_EuroVA.pdf},
DOI = {10.2312/eurova.20151100}
}
@INPROCEEDINGS{Silva:2015:VEM,
title = {{Visual Explanation of Multidimensional Projections}},
author = {Silva, Renato R. O. da and Rauber, Paulo E. and Martins, Rafael M. and Minghim, Rosane and Telea, Alexandru C.},
booktitle = {Poster session of the National ICT.OPEN (Amersfoort)},
year = {2015},
month = mar,
pdf = {RenatoSilva_2015_ICTOPen.pdf}
}
@article{Sobiecki:2015:ICTOpen,
title = {Automatic Gap Restoration in 2D and 3D Digital Images},
author = {A. Sobiecki and A. Jalba and A. Telea},
journal = {ICTOpen 2015, Amersfoort},
month = {March},
year = 2015
}
@@article{Sobiecki:2015:IDS,
journal = {Proc. 4th World Congress of Dermoscopy (IDS), Vienna, Austria},
author = {A. Sobiecki and J. Koehoorn and D. Boda and C. Solovan and A. Diaconeasa and A. Jalba and A. Telea},
title = {A New Efficient Method for Digital Hair Removal by Dense Threshold Analysis},
year = 2015,
doi = {},
note = {poster and extended abstract}
}
@inproceedings{Sobiecki:2015:ISMM,
booktitle = {International Symposium on Mathematical Morphology (ISMM)},
author = {J. Koehoorn and A. Sobiecki and D. Boda and A. Diaconeasa and S. Doshi and S. Paisey and A. Jalba and A. Telea},
title = {Automated Digital Hair Removal by Threshold Decomposition and Morphological Analysis},
year = 2015,
doi = {10.1007/978-3-319-18720-4_2},
note = {}
}
@Article{mudali15:_class_parkin_syndr_fdg_pet,
author = {D. Mudali and L. K. Teune and R. J. Renken and
K. L. Leenders and J. B. T. M. Roerdink},
title = {Classification of {Parkinsonian} Syndromes from
{FDG-PET} Brain Data Using Decision Trees with
{SSM/PCA} Features},
journal = {Computational and Mathematical Methods in Medicine},
year = 2015,
volume = {Article ID 136921},
pages = {1-10},
url = {http://dx.doi.org/10.1155/2015/136921}
}
@INPROCEEDINGS{Rauber:2015:IIF, booktitle = {EuroVis Workshop on Visual Analytics (EuroVA)}, title = {{Interactive Image Feature Selection Aided by Dimensionality Reduction}}, author = {Rauber, Paulo Eduardo and Silva, Renato Rodrigues Oliveira da and Feringa, Sander and Celebi, M. Emre and Falcao, Alexandre X. and Telea, Alexandru C.}, year = {2015}, publisher = {The Eurographics Association}, pdf = {PauloRauber_2015_EuroVA.pdf} }
@TechReport{Everts:2015:IIL,
author = {Maarten H. Everts and Henk Bekker and Jos B. T. M. Roerdink and Tobias Isenberg},
title = {{Interactive Illustrative Line Styles and Line Style Transfer Functions for Flow Visualization}},
number = {1503.05787},
institution = {arXiv.org},
year = {2015},
month = mar,
pdf = {http://tobias.isenberg.cc/personal/papers/Everts_2015_IIL.pdf},
url = {http://tobias.isenberg.cc/VideosAndDemos/Everts2015IIL},
url2 = {http://www.arxiv.org/abs/1503.05787},
note = {Extended version of a short paper at Pacific Graphics 2011, http://dx.doi.org/10.2312/PE/PG/PG2011short/105-110}
}
@InProceedings{Gronde:2015:SGM,
author = {van de Gronde, Jasper J. and Roerdink, Jos B. T. M.},
title = {Sponges for Generalized Morphology},
booktitle = {Mathematical Morphology and Its Applications to Signal and Image Processing},
editor = {Benediktsson, J\'on Atli and Chanussot, Jocelyn and Najman, Laurent and Talbot, Hugues},
series = {Lecture Notes in Computer Science},
volume = 9082,
publisher = {Springer International Publishing},
pages = {351--362},
year = 2015,
doi = {10.1007/978-3-319-18720-4_30},
pdf = {Gronde_2015_SGM.pdf}
}
@InProceedings{Gronde:2015:FCG,
author = {van de Gronde, Jasper J. and Schubert, Herman R. and Roerdink, Jos B. T. M.},
title = {Fast Computation of Greyscale Path Openings},
booktitle = {Mathematical Morphology and Its Applications to Signal and Image Processing},
editor = {Benediktsson, J\'on Atli and Chanussot, Jocelyn and Najman, Laurent and Talbot, Hugues},
series = {Lecture Notes in Computer Science},
volume = 9082,
publisher = {Springer International Publishing},
pages = {621--632},
year = 2015,
doi = {10.1007/978-3-319-18720-4_52},
pdf = {Gronde_2015_FCG.pdf},
url = {http://bit.ly/1BTC2Je}
}
@Article{everts15:_explor_brain_white_matter_struc,
author = {Maarten H. Everts and Eric Begue and Henk Bekker and
Jos B. T. M. Roerdink and Tobias Isenberg },
title = {Exploration of the Brain's White Matter Structure
through Visual Abstraction and Multi-Scale Local
Fiber Tract Contraction},
journal = {IEEE Transactions on Visualization and Computer
Graphics},
year = 2015,
volume = 21,
number = 7,
pages = {808--821},
doi = {http://dx.doi.org/10.1109/TVCG.2015.2403323}
}
@inproceedings{Zwan:2015:VISAPP,
booktitle = {Proc. VISAPP},
author = {M. van der Zwan and A. Telea},
title = {Robust and Fast Teat Detection and Tracking in Low-Resolution Videos for Automatic Milking Devices},
pages = {520--530},
year = 2015
}
@inproceedings{Peysakhovich:2015:PacificVis,
booktitle = {Proc. PacificVis},
author = {V. Peysakhovich and C. Hurter and A. Telea},
title = {Attribute-Driven Edge Bundling for General Graphs with Applications in Trail Analysis},
year = 2015
}
@Article{jalba15:_inter_segmen_visual_dti_data,
author = {Andrei C. Jalba and Michel A. Westenberg and Jos
B. T. M. Roerdink},
title = {Interactive Segmentation and Visualization of DTI
Data Using a Hierarchical Watershed Representation},
journal = {IEEE Transactions on Image Processing},
year = 2015,
volume = 24,
number = 3,
month = mar,
pages = {1025--1035}
}
% 2014
@book{telea14:visbook,
author = {A. Telea},
title = {Data Visualization: Principles and Practice (2nd edition)},
publisher = {CRC Press},
year = 2014
}
@inproceedings{Sobiecki:2014:CGVC,
booktitle = {Proc. Theory and Practice of Computer Graphics (TPCG)},
author = {A. Sobiecki and A. Jalba and D. Boda and A. Diaconeasa and A. Telea},
title = {Gap-Sensitive Segmentation and Restoration of Digital Images},
year = 2014,
publisher = {Eurographics},
pages = {1-8},
doi = {http://diglib.eg.org/EG/DL/LocalChapterEvents/TPCG/CGVC14/001-008.pdf.abstract.pdf;internal&action=action.digitallibrary.ShowPaperAbstract},
pdf = {}
}
@inproceedings{voinea14:solidsdd,
author = {L. Voinea and A. Telea},
title = {Visual Clone Analysis with {SolidSDD}},
booktitle = {Proc. 2nd Working Conf. on Software Visualization (VISSOFT)},
publisher = {IEEE},
pages = {79-82},
year = 2014
}
@Article{codreanu14:_evaluat_suppor_vector_machin,
author = {Codreanu, Valeriu and Dröge, Bob and Williams, David
and Yasar, Burhan and Yang, Po and Liu, Baoquan and
Dong, Feng and Surinta, Olarik and Schomaker,
Lambert R.B. and Roerdink, Jos B.T.M. and Wiering,
Marco A.},
title = {Evaluating automatically parallelized versions of
the support vector machine},
journal = {Concurrency and Computation: Practice and
Experience},
issn = {1532-0634},
url = {http://dx.doi.org/10.1002/cpe.3413},
doi = {10.1002/cpe.3413},
pages = {n/a--n/a},
keywords = {GPU, automatic parallelization, handwritten digit
recognition, machine learning, support vector
machine},
year = 2014,
}
@inproceedings{hurter13:uistdemo,
title = {Interactive Exploration and Selection in Volumetric Datasets with Color Tunneling},
author = {C. Hurter and A. Taylor and S. Carpendale and A. Telea},
booktitle = {Proc. ACM Symp. on User Interface Software and Technology (UIST) -- adjunct publications},
publisher = {ACM},
pages = {49-50},
year = 2014
}
@InProceedings{Gronde:2014:PBM,
author ={van de Gronde, Jasper J. and Lysenko, Mikola and Roerdink, Jos B. T. M.},
editor = {Hotz, Ingrid and Schultz, Thomas},
title ={Path-Based Mathematical Morphology on Tensor Fields},
booktitle ={Visualization and Processing of Higher Order Descriptors for Multi-Valued Data},
series ={Mathematics and Visualization},
year ={2015},
publisher ={Springer International Publishing},
pages = {109--127},
url = {http://bit.ly/1zpfIXf},
doi = {10.1007/978-3-319-15090-1_6}
}
@Article{teune14:_alzheim,
AUTHOR = {Laura K. Teune and Fijanne Strijkert and Remco
J. Renken and Gerbrand J. Izaks and Jeroen J. de
Vries and Marcel Segbers and Jos B.T.M. Roerdink
and Rudi A.J.O. Dierckx and Klaus L. Leenders },
TITLE = {The {Alzheimer's} disease-related glucose metabolic
brain pattern},
JOURNAL = {Current Alzheimer Research},
YEAR = 2014,
VOLUME = 11,
number = 8,
pages = {725-732},
DOI = {10.2174/156720501108140910114230}
}
@Article{teune14:_parkin_diseas_pcasl_mri_fdg_pet,
AUTHOR = {L. K. Teune and R. J. Renken and B. M. de Jong and
A. T. Willemsen and M. J. van Osch and
J. B. T. M. Roerdink and R. A. Dierckx and
K. L. Leenders},
TITLE = {{Parkinson's} Disease-related perfusion and glucose
metabolic brain patterns identified with {PCASL-MRI}
and {FDG-PET} imaging},
JOURNAL = {NeuroImage: Clinical},
YEAR = 2014,
volume = 5,
pages = {240-244},
doi = {10.1016/j.nicl.2014.06.007}
}
@Article{hurter14:flightvis1,
title = {Bundled Visualization of Dynamic Graph and Trail Data},
author = {C. Hurter and S. Fabrikant and T. Klein and A. Telea},
journal = {IEEE TVCG},
volume = 20,
number = 8,
pages = {1141-1157},
year = 2014
}
@InProceedings{hurter14:color_tunneling,
author = {C. Hurter and A. R. Taylor and S. Carpendale and A. Telea},
title = {Color Tunneling: Interactive Exploration and Selection in Volumetric Datasets},
booktitle = {Proc. IEEE PacificVis},
year = 2014,
pages = {225-232}
}
@inproceedings{archambault14:multivarnetworks,
author = {D. Archambault and J. Abello and J. Kennedy and S. Kobourov and K.-L. Ma and S. Miksch and C. Muelder and A. Telea},
year = 2014,
booktitle = {Multivariate Network Visualization (Proc. Dagstuhl Seminar 13201)},
editors = {A. Kerren and H. C. Purchase and M. O. Ward},
pages = {151-174},
publisher = {Springer}
}
@inproceedings{diehl14:multivarnetworks,
author = {S. Diehl and A. Telea},
year = 2014,
booktitle = {Multivariate Network Visualization (Proc. Dagstuhl Seminar 13201)},
editors = {A. Kerren and H. C. Purchase and M. O. Ward},
pages = {13-36},
publisher = {Springer}
}
@article{martins14:DR,
author = {R. Martins and D. Coimbra and R. Minghim and A. Telea},
title = {Visual analysis of dimensionality reduction quality for parameterized projections},
journal = {Computers \& Graphics},
volume = 41,
pages = {26-42},
year = 2014
}
@article{hurter14:flightvis2,
author = {C. Hurter and S. Conversy and D. Gianazza and A. Telea},
title = {Interactive image-based information visualization for aircraft trajectory analysis},
journal = {Transportation Research Part C},
volume = 27,
number = 2,
publisher = {Pergamon},
pages = {207-227},
year = 2014
}
@InProceedings{mudali14:_compar_fdg_pet,
author = {D. Mudali and L. K. Teune and R. J. Renken and
K. L. Leenders and Jos B. T. M. Roerdink},
title = {Comparison of dedison tree and stepwise regression
methods in classification of {FDG-PET} data},
booktitle = {Third European Conference on Clinical Neuroimaging,
March 31-April 1, Lille, France},
year = 2014,
pages = 16,
note = {Abstract}
}
@article{Sobiecki:2014:PRL,
title = {Comparison of curve and surface skeletonization methods for voxel shapes},
author = {A. Sobiecki and A. Jalba and A. Telea},
journal = {Pattern Recognition Letters},
year = 2014,
volume = 47,
doi = {10.1016/j.patrec.2014.01.012},
pages = {147-156}
}
@Article{liu14:_paral_center_extrac_gpu,
author = {Baoquan Liu and Alexandru C. Telea and Jos
B.T.M. Roerdink and Gordon J. Clapworthy and David
Williams and Po Yang and Feng Dong and Valeriu
Codreanu and Alessandro Chiarini},
title = {Parallel Centerline Extraction on the {GPU}},
journal = {Computers \& Graphics},
year = 2014,
volume = 41,
pages = {72-83}
}
@article{Gronde:2012:GCM,
author = {van de Gronde, Jasper J. and Roerdink, Jos B. T. M.},
journal = {IEEE Transactions on Image Processing},
publisher = {IEEE Press},
title = {Group-Invariant Colour Morphology Based on Frames},
year = {2014},
month = mar,
volume = 23,
number = 3,
pages = {1276--1288},
ISSN={1057-7149},
doi={10.1109/TIP.2014.2300816},
pdf = {papers/Gronde_2014_GCM.pdf},
url = {http://bit.ly/MwNF3F}
}
@inproceedings{Klein:2014:DMV,
author = {Tijmen Klein and Matthew van der Zwan and Alexandru Telea},
title = {{Dynamic Multiscale Visualization of Flight Data}},
booktitle = {Proc. Intl. Joint Conf. on Computer Vision, Imaging and Computer Graphics Theory and Applications (VISAPP)},
year = {2014},
pages = {104-114}
}
@PhdThesis{broeksema14:thesis,
author = {Bertjan Broeksema},
title = {The Decision Exploration Lab: Supporting the business analyst in understanding automated decisions},
school = {Johann Bernoulli Institute for Mathematics and
Computer Science},
year = 2014,
month = {March},
address = {University of Groningen, The Netherlands},
note = {Promotors: A. C. Telea, G. Melancon},
url = {http://www.cs.rug.nl/~alext/PAPERS/PhD/broeksema14.pdf}
}
@inproceedings{kustra14:visapp,
author = {J. Kustra and A. Jalba and A. Telea},
title = {Shape Segmentation Using Medial Point Clouds with Applications to Dental Cast Analysis},
booktitle = {Proc. Intl. Joint Conf. on Computer Vision, Imaging and Computer Graphics Theory and Applications (VISAPP)},
year = 2014,
pages = {151-159}
}
@inproceedings{kustra14:icce_1,
title = {A Medial Point Cloud based Algorithm for Dental Cast Segmentation},
author = {J. Kustra and M. de Jager and A. Jalba and A. Telea},
booktitle = {Proc. International Conference on Consumer Electronics (ICCE)},
publisher = {IEEE},
year = 2014,
pages = {331-334}
}
@inproceedings{kustra14:icce_2,
title = {Teeth Shape Modeling Pipeline for Oral Healthcare Appliances Development},
author = {J. Kustra and M. de Jager and A. Jalba and A. Telea},
booktitle = {Proc. International Conference on Consumer Electronics (ICCE)},
publisher = {IEEE},
year = 2014,
pages = {179-180}
}
@InProceedings{buddelmeijer14:_analy_livin_survey,
author = {Hugo Buddelmeijer and Parisa Noorishad and David
Williams and Milena Ivanova and Jos
B. T. M. Roerdink and Edwin A. Valentijn},
title = {Analyzing Living Surveys: Visualization beyond the
Data Release},
booktitle = {ADASS XXIV (Astronomical Data Analysis Software \&
Systems), 5-9 October, Calgary},
year = 2014,
note = {Abstract}
}
@Incollection{Pfister:2014:VC, author= {Pfister, Hanspeter and Kaynig, Verena and Botha, Charl P. and Bruckner, Stefan and Dercksen, Vincent J. and Hege, Hans-Christian and Roerdink, Jos B. T. M.}, title= {Visualization in Connectomics}, editor= {Hansen, D. Charles and Chen, Min and Johnson, R. Christopher and Kaufman, E. Arie and Hagen, Hans}, booktitle= {Scientific Visualization: Uncertainty, Multifield, Biomedical, and Scalable Visualization}, year= {2014}, publisher= {Springer}, address= {London}, chapter = {21}, pages= {221--245}, doi= {http://dx.doi.org/10.1007/978-1-4471-6497-5_21} }
% 2013
@inproceedings{Rauber:2013:ISI, author={Rauber, P.E. and Falcao, A.X. and Spina, T.V. and De Rezende, P.J.}, booktitle={Graphics, Patterns and Images (SIBGRAPI), 2013 26th SIBGRAPI - Conference on}, title={Interactive Segmentation by Image Foresting Transform on Superpixel Graphs}, year=2013, month=aug, pages={131-138}, ISSN={1530-1834}}
@book{telea13:vissoft,
author = {A. Telea and A. Marcus and A. Kerren},
title = {Proceedings of 2013 IEEE Working Conference on Software Visualization (VISSOFT)},
publisher = {IEEE},
year = 2013
}
@inproceedings{hanjalic13:clonevol,
title = {{ClonEvol:} Visualizing Software Evolution with Code Clones},
author = {A. Hanjalic},
booktitle = {Proc. IEEE VISSOFT},
year = 2013
}
@Article{roerdink13:_visual_digit_scien,
author = {Jos Roerdink},
title = {Visualisation in Digital Science},
journal = {Pan European Networks. Science \& Technology},
year = 2013,
volume = 9,
pages = {116--117},
month = dec,
url = {http://www.paneuropeannetworks.com/ST9/#116}
}
@InProceedings{Gronde:2013:RIM,
author = {van de Gronde, Jasper J. and Wilkinson, Michael H. F. and Roerdink, Jos B. T. M.},
title = {Rotation-invariant morphological filtering of tensor fields using frames},
booktitle = {Poster session of the National ICT.OPEN (Eindhoven)},
year = 2013,
month = nov,
pdf = {papers/Gronde_2013_RIM.pdf},
iwicategory = {other}
}
@InProceedings{Gronde:2013:GFC2,
author = {van de Gronde, Jasper J. and Roerdink, Jos B. T. M.},
title = {Group-Invariant Frames for Colour Morphology},
booktitle = {ASCI.OPEN (Eindhoven)},
year = 2013,
month = nov
}
@inproceedings{Gronde:2013:WGS,
author = {van de Gronde, Jasper J.},
title = {Web Graphics for Science},
booktitle = {HTML5 Developer Conference},
year = 2013,
month = oct,
url = {http://iwi232.iwinet.rug.nl/public/jasper/GraphicalWeb2013/paper.html}
}
@article{Gronde:2013:FLO,
author = {van de Gronde, Jasper J. and Roerdink, Jos B. T. M.},
title = {Frames, the Loewner order and eigendecomposition for morphological operators on tensor fields},
journal = {Pattern Recognition Letters},
issn = {0167-8655},
year = {2014},
volume = 47,
pages = {40--49},
pdf = {papers/Gronde_2013_FLO.pdf},
url = {http://bit.ly/15VBe8w},
doi = {10.1016/j.patrec.2014.03.013}
}
@Article{kustra13:manifolds,
author = {J. Kustra and A. Jalba and A. Telea},
title = {Robust Segmentation of Multiple Manifolds from Unoriented Noisy Point Clouds},
journal = {Computer Graphics Forum},
volume = 33,
number = 1,
pdf = {http://www.cs.rug.nl/~alext/PAPERS/CGF13/paper2.pdf},
year = 2014,
pages = {73-87}
}
@Article{roerdink13:_connec_morph_operat_tensor_images,
author = {Jos Roerdink},
title = {Connected Morphological Operators for Tensor Images},
journal = {ERCIM NEWS},
year = 2013,
volume = 95,
pages = {32--33},
month = oct,
note = {Special theme: Image Understanding},
url = {http://ercim-news.ercim.eu}
}
@Article{broeksema13:del,
author = {B. Broeksema and T. Baudel and A. Telea and P. Crisafuli},
title = {Decision Exploration Lab: A visual analytics solution for Decision Management},
journal = {IEEE TVCG (Proc. VAST)},
pdf = {http://www.cs.rug.nl/~alext/PAPERS/VAST13/paper.pdf},
year = 2013,
volume = 19,
number = 12,
pages = {1972-1981}
}
@Article{broeksema13:vam,
author = {B. Broeksema and A. Telea and T. Baudel},
title = {Visual Analysis of Multidimensional Categorical Datasets},
journal = {Computer Graphics Forum},
pdf = {http://www.cs.rug.nl/~alext/PAPERS/CGF13/paper.pdf},
year = 2013,
volume = 32,
number = 8,
pages = {158-169}
}
@InProceedings{Truemper13:ICPC,
author = {J. Truemper and J. Doellner and A. Telea},
title = {Multiscale Visual Comparison of Execution Traces},
booktitle = {Proc. ICPC},
year = 2013,
pages = {342-350},
publisher = {IEEE}
}
@inproceedings{Sobiecki:2013:ISMM,
booktitle = {Mathematical Morphology and Its Applications to Image and Signal Processing},
author = {A. Sobiecki and H. Yasan and A. Jalba and A. Telea},
title = {Qualitative Comparison of Contraction-based Curve Skeletonization Methods},
year = 2013,
doi = {10.1007/978-3-642-38294-9_36},
pdf = {Sobiecki:2013:ISMM.pdf}
}
@article{Telea:IVS:2013,
title = {Introduction to the special issue of selected papers from {ACM SOFTVIS} 2010},
author = {A. Telea and C. Goerg and S. Reiss (eds.)},
journal = {Information Visualization},
publisher = {SAGE Publ.},
year = 2013
}
@article{Sobiecki:2013:ICTOpen,
title = {Qualitative and Quantitative Comparison of Curve and Surface Skeletons -- A State of the Art Review},
author = {A. Sobiecki and A. Jalba and A. Telea},
journal = {ICTOpen 2013},
pdf = {sobiecki2013ICTOpen.pdf},
year = 2013
}
@InProceedings{Gerl:2013:VSI,
author = {Moritz Gerl and Tobias Isenberg},
title = {{Visual Showcase: Interactive Example-based Hatching}},
booktitle = {Visual Showcase at the Joint ACM/EG Symposium on Computational Aesthetics, Sketch-Based Interfaces and Modeling, and Non-Photorealistic Animation and Rendering (Expressive 2013, July 19--20, Anaheim, CA, USA)},
year = {2013},
pdf = {papers/Gerl_2013_VSI.pdf},
url = {http://tobias.isenberg.cc/VideosAndDemos/Gerl2013IEH},
video = {http://www.youtube.com/watch?v=IuvUC3HFP44&hd=1},
note = {Extended abstract and exhibition piece},
abstract = {We exhibit two printouts of computer-generated pen-and-ink hatching illustrations. These illustrations were created semi-automatically using an interactive example-based hatching method [Gerl and Isenberg 2013].},
iwicategory = {other}
}
@InProceedings{Williams:2013:PPAM,
author = {David Williams and Valeriu Codreanu and Po Yang and Baoquan Liu and Feng Dong and Burhan Yasar and Babak Mahdian and Alessandro Chiarini and Xia Zhao and Jos B.T.M. Roerdink},
title = {Evaluation of autoparallelization toolkits for commodity {GPUs}},
booktitle = {Parallel Processing and Applied Mathematics},
series = {Lecture Notes in Computer Science},
volume = 8384,
pages = {447--457},
publisher = {Springer},
year = {2014},
pdf = {Williams_2013_PPAM.pdf},
url = {http://link.springer.com/chapter/10.1007/978-3-642-55224-3_42}
}
@InProceedings{Codreanu:2013:HPCS,
author = {Valeriu Codreanu and Feng Dong and Baoquan Liu and Jos B.T.M. Roerdink and David Williams and Po Yang and Burhan Yasar},
title = {{GPU-ASIFT}: A Fast Fully Affine-Invariant Feature
Extraction Algorithm},
booktitle = {International Conference on High Performance Computing \& Simulation 2013, July 1-5, Helsinki, Finland},
publisher = {IEEE},
year = {2013},
pages = {474--481},
note = {Outstanding Paper Runner-up Award at HPCS 2013}
}
@InProceedings{Petrica:2013:FTFC,
author = {Lucian Petrica and Valeriu Codreanu and Sorin Cotofana},
title = {VASILE: A Reconfigurable Vector Architecture for Instruction Level Frequency Scaling},
booktitle = {2013 IEEE Faible Tension Faible Consommation, 20-21 June},
publisher = {IEEE},
year = {2013},
note = {}
}
@InProceedings{Bara:2013:HEART,
author = {Calin Bira and Liviu Gugu and Radu Hobincu and Valeriu Codreanu and Lucian Petrica and Sorin Cotofana},
title = {An Energy Effective SIMD Accelerator for Visual Pattern Matching},
booktitle = {4th International Symposium on Highly Efficient Accelerators and Reconfigurable Technologies 2013, June 13-14},
publisher = {ACM},
year = {2013},
note = {}
}
@InProceedings{Gronde:2013:FTM,
author = {van de Gronde, Jasper J. and Roerdink, Jos B. T. M.},
title = {Frames for Tensor Field Morphology},
booktitle = {Geometric Science of Information},
editor = {Frank Nielsen and Fr\'ed\'eric Barbaresco},
series = {Lecture Notes in Computer Science},
volume = 8085,
publisher = {Springer Berlin Heidelberg},
pages = {527--534},
chapter = 58,
year = 2013,
doi = {10.1007/978-3-642-40020-9_58},
pdf = {Gronde_2013_FTM.pdf},
url = {http://bit.ly/15MoLEI}
}
@InProceedings{Gronde:2013:GFC,
author = {van de Gronde, Jasper J. and Roerdink, Jos B. T. M.},
title = {Group-Invariant Frames for Colour Morphology},
booktitle = {Mathematical Morphology and Its Applications to Signal and Image Processing},
editor = {Luengo Hendriks, Cris L. and Borgefors, Gunilla and Strand, Robin},
series = {Lecture Notes in Computer Science},
volume = 7883,
publisher = {Springer Berlin Heidelberg},
pages = {267--278},
chapter = 23,
year = 2013,
doi = {10.1007/978-3-642-38294-9_23},
pdf = {Gronde_2013_GFC.pdf},
url = {http://bit.ly/YarcHY}
}
@PhdThesis{ersoy13:_image_based_graph_visualization,
author = {Ozan Ersoy},
title = {Image-based Graph Visualization},
school = {Johann Bernoulli Institute for Mathematics and
Computer Science},
year = 2013,
month = {March},
address = {University of Groningen, The Netherlands},
note = {Promotor: A. C. Telea},
url = {http://iwi232.iwinet.rug.nl/public/ozan/Ersoy_2013_IBGV.pdf}
}
@Article{jalba13:_fast_spars_level_sets_graph_hardw,
author = {Andrei C. Jalba and Wladimir J. van der Laan and Jos
B. T. M. Roerdink},
title = {Fast Sparse Level-Sets on Graphics Hardware},
journal = {IEEE Trans.\ Visualization and Computer Graphics},
year = 2013,
volume = 19,
number = 1,
pages = {30--44},
doi =
{http://doi.ieeecomputersociety.org/10.1109/TVCG.2012.69}
}
@ARTICLE{teune13:_valid,
AUTHOR = {L. K. Teune and R. J. Renken and D. Mudali and
B. M. De Jong and R. A. Dierckx and
J. B. T. M. Roerdink and K. L. Leenders},
TITLE = {Validation of parkinsonian disease-related metabolic
brain patterns},
JOURNAL = {Movement Disorders},
YEAR = 2013,
volume = 28,
number = 4,
pages = {547--551},
doi = {10.1002/mds.25361}
}
@inproceedings{Sobiecki:2013:visapp,
author = {Andr\'e Sobiecki and Alexandru C. Telea and Gilson Giraldi and Luiz A.P. Neves and Carlos E. Thomaz},
title = {{Low-Cost Automatic Inpainting for Artifact Suppression in Facial Images}},
booktitle = {8th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications, VISAPP 13},
year = {2013},
OPTvolume = {},
OPTnumber = {},
OPTmonth = may,
OPTpages = {10},
OPTdoi = {},
url = {http://www.cs.rug.nl/~alext/PAPERS/VISAPP13/finpaint.pdf},
pdf = {},
video = {},
abstract = {Facial images are often used in applications that need to recognize or identify persons. Many existing facial recognition tools have limitations with respect to facial image quality attributes such as resolution, face position, and artifacts present in the image. In this paper we describe a new low-cost framework for preprocessing low-quality facial images in order to render them suitable for automatic recognition. For this, we first detect
artifacts based on the statistical difference between the target image and a set of pre-processed images in the database. Next, we eliminate artifacts by an inpainting method which combines information from the target image and similar images in our database. Our method has low computational cost and is simple to implement, which makes it attractive for usage in low-budget environments. We illustrate our method on several images taken from public surveillance databases, and compare our results with existing inpainting techniques.} }
@Article{Gerl:2013:IEH,
author = {Moritz Gerl and Tobias Isenberg},
title = {{Interactive Example-based Hatching}},
journal = {Computers \& Graphics},
year = {2013},
volume = {37},
number = {1--2},
month = feb #}
@inproceedings{Zwan:2013:DMD,
author = {Matthew van der Zwan and Yuri Meiburg and Alexandru Telea},
title = {{A Dense Medial Descriptor for Image Analysis}},
booktitle = {VISAPP 2013 - Proceedings of the International Conference
on Computer Vision Theory and Applications, Volume 1, Barcelona,
Spain, 21-24 February, 2013},
year = {2013},
pages = {285-293},
OPTvolume = {},
OPTnumber = {},
OPTmonth = {},
OPTpages = {},
OPTdoi = {},
url = {},
pdf = {},
video = {},
note = {},
abstract = {We present dense medial descriptors, a new technique which generalizes the well-known medial axes to encode and manipulate whole 2D grayvalue images, rather than binary shapes. To compute our descriptors, we first reduce an image to a set of threshold-sets in luminance space. Next, we compute a simplified representation of each threshold-set using a noise-resistant medial axis transform. Finally, we use these medial axis transforms to perform a range of operations on the input image, from perfect reconstruction to segmentation, simplification, and artistic effects. Our pipeline can robustly handle any 2D grayscale image, is easy to use, and allows an efficient CPU or GPU-based implementation. We demonstrate our dense medial descriptors with several image-processing applications.}
}
@inproceedings{Kustra:2013:visapp,
author = {Jacek Kustra and Andrei Jalba and Alexandru Telea},
title = {{Probabilistic View-based Curve Skeleton Computation on the GPU}},
booktitle = {8th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications, VISAPP 13},
year = {2013},
OPTvolume = {},
OPTnumber = {},
OPTmonth = may,
OPTpages = {10},
OPTdoi = {},
url = {},
pdf = {},
video = {},
note = {To appear}
}
@inproceedings{Hurter:2013:pacificvis,
author = {Christophe Hurter and Ozan Ersoy and Alexandru Telea},
title = {{Smooth Bundling of Large Streaming and Sequence Graphs}},
booktitle = {Proc. IEEE PacificVis},
year = {2013},
OPTvolume = {},
OPTnumber = {},
OPTmonth = may,
OPTpages = {8},
OPTdoi = {},
url = {},
pdf = {},
video = {},
}
@Article{Kyprianidis:2013:SAT,
author = {Jan Eric Kyprianidis and John Collomosse and Tinghuai Wang and Tobias Isenberg},
title = {{S}tate of the `{A}rt': {A} {T}axonomy of {A}rtistic {S}tylization {T}echniques for {I}mages and {V}ideo},
journal = {IEEE Transactions on Visualization and Computer Graphics},
year = {2013},
volume = {19},
number = {5},
month = may,
pages = {866--885},
doi = {http://dx.doi.org/10.1109/TVCG.2012.160},
url = {http://tobias.isenberg.cc/VideosAndDemos/Kyprianidis2012SAT},
pdf = {Kyprianidis_2012_SAT.pdf},
abstract = {This paper surveys the field of non-photorealistic rendering (NPR), focusing on techniques for transforming 2D input (images and video) into artistically stylized renderings. We first present a taxonomy of the 2D NPR algorithms developed over the past two decades, structured according to the design characteristics and behavior of each technique. We then describe a chronology of development from the semi-automatic paint systems of the early nineties, through to the automated painterly rendering systems of the late nineties driven by image gradient analysis. Two complementary trends in the NPR literature are then addressed, with reference to our taxonomy. First, the fusion of higher level computer vision and NPR, illustrating the trends toward scene analysis to drive artistic abstraction and diversity of style. Second, the evolution of local processing approaches toward edge-aware filtering for real-time stylization of images and video. The survey then concludes with a discussion of open challenges for 2D NPR identified in recent NPR symposia, including topics such as user and aesthetic evaluation.},
OPTnote = {}
}
@Article{Isenberg:2013:DVI,
author = {Petra Isenberg and Tobias Isenberg and Tobias Hesselmann and Bongshin Lee and von Zadow, Ulrich and Anthony Tang},
title = {{D}ata {V}isualization on {I}nteractive {S}urfaces: {A} {R}esearch {A}genda},
journal = {IEEE Computer Graphics and Applications},
year = {2013},
volume = {33},
number = {2},
month = mar # {/} # apr,
pages = {16--24},
doi = {http://dx.doi.org/10.1109/MCG.2013.24},
url = {http://tobias.isenberg.cc/VideosAndDemos/Isenberg2013DVI},
OPTpdf = {papers/Isenberg_2013_DVI.pdf},
OPTnote = {},
abstract = {Interactive tabletops and surfaces provide rich opportunities for data visualization and analysis, and consequently are used increasingly in such settings. In this article we discuss the potential benefits of using interactive surface platforms for visualization applications and present a research agenda of some of the most pressing research challenges in this space. The agenda emerged from discussions with researchers and practitioners in human-computer interaction, computer-supported collaborative work, and a wide variety of visualization fields at the DEXIS 2011 workshop on ``Data Exploration for Interactive Surfaces.''}
}
@Article{Isenberg:2013:VAS,
author = {Tobias Isenberg},
title = {{V}isual {A}bstraction and {S}tylisation of {M}aps},
journal = {The Cartographic Journal},
year = {2013},
volume = {50},
number = {1},
month = feb,
pages = {8--18},
doi = {http://dx.doi.org/10.1179/1743277412Y.0000000007},
url = {http://tobias.isenberg.cc/VideosAndDemos/Isenberg2013VAS},
pdf = {Isenberg_2013_VAS.pdf},
abstract = {We explore visual map abstraction for the generation of stylized renderings of 2D map data. We employ techniques that are centered around the concept of shape simplification and graph layout and that allow iterative abstraction of 2D maps. We use data from publicly available sources and show how we can iteratively generate aesthetic renditions of these maps. These renditions do not have the goal to allow for navigation tasks but instead show the map data in a distorted manner. The techniques used to create these images apply simplification, abstraction/generalization, and displacement operations to the map elements in varying orders and add stylistic shading to produce aesthetic renditions for print or electronic displays. The degree of abstraction/generalization can be individually chosen and determines the characteristics of the distorted map: whether components retain their shape, degenerate, or are processed in a manner that the abstraction becomes the focus of the image rather than the underlying map data. The renditions can be further personalized by choosing shading and colors for this shading. Together, the presented techniques allow for playful and creative exploration of aesthetic renditions of 2D map data.}
}
@InProceedings{Williams:2013:ACP,
author = {David Williams and Valeriu Codreanu and Jos B.T.M. Roerdink and Po Yang and Baoquan Liu and Feng Dong and Alessandro Chiarini},
title = {Accelerating Colonic Polyp Detection Using Commodity Graphics Hardware},
booktitle = {Proceedings of the International Conference on Computer Medical Applications},
year = {2013},
address = {Sousse, Tunisia},
pages = {1--6},
doi = {http://dx.doi.org/10.1109/ICCMA.2013.6506147},
pdf = {Williams_2013_ACP.pdf}
}
% 2012
@article{Hobincu:2012:GCC,
author = {Radu Hobincu and Valeriu Codreanu and Lucian Petrica},
journal = {UPB Scientific Bulletin},
volume = {74},
number = {3},
title = {GNU Compiler Collection Backend Port For The Integral Parallel Architecture},
year = {2012}
}
@Article{Sobiecki:2012:AFS,
author = { Andr\'e Sobiecki and Gilson A. Giraldi and Luiz A.P. Neves and Carlos E. Thomaz },
title = { An Automatic Framework for Segmentation and Digital Inpainting of 2D Frontal Face Image },
journal = { IEEE Latin America Transactions },
year = {2012},
pdf = {http://ieeexplore.ieee.org/xpl/articleDetails.jsp?tp=&arnumber=6418131&contentType=Journals+%26+Magazines&searchField%3DSearch_All%26queryText%3DAn+automatic+face+inpainting},
OPTdoi = {10.1109/TLA.2012.6418131}
}
@article{Wassenaar:2012:OSM,
journal = {Journal of Chemical Theory and Computation},
volume = {8},
number = {10},
pages = {3618--3627},
title = {SQUEEZE-E: The Optimal Solution for Molecular Simulations with Periodic Boundary Conditions},
author = {Wassenaar, Tsjerk A. and Vries, Sjoerd de and Bonvin, Alexandre M.J.J. and Bekker, Henk},
year = {2012},
doi = {10.1021/ct3000662},
pdf = {2012JChemTheoryComputWassenaar.pdf}
}
@InCollection{Sobiecki:2012:Face,
author = {Andr\'e Sobiecki and Gilson Giraldi and Luiz A.P. Neves and Gilka J.F. Gattas and Carlos E. Thomaz},
title = {Arcabouco Computacional para Segmentacao e Restauracao Digital de Artefatos em Imagens Frontais de Face},
booktitle = {Avancos em Visao Computacional, (Chapter Book)},
year = {2012},
month = dec,
pdf = {http://omnipax.com.br/livros/2012/AVC/avc-cap17.pdf},
doi = {10.7436/2012.avc.17},
iwicategory = {Chapter Book}
}
@InCollection{Sobiecki:2012:Entropia,
author = {Andr\'e Sobiecki and Celso D. Gallao and Daniel C. Cosme and Paulo S.S. Rodrigues},
title = {Comparacao de Imagens Tomograficas Cone-Beam e Multi-Slice Atraves da Entropia de Tsallis e da Divergencia de Kullback-Leibler},
booktitle = {Avancos em Visao Computacional, (Chapter Book)},
year = {2012},
month = dec,
pdf = {http://omnipax.com.br/livros/2012/AVC/avc-cap03.pdf},
doi = {10.7436/2012.avc.3},
iwicategory = {Chapter Book}
}
@InProceedings{Codreanu:2012:GPU,
author = {Valeriu Codreanu and David Williams and Jos B.T.M. Roerdink },
title = {A General Toolkit for `GPUtilisation'' in SME Applications},
booktitle = {Poster session of the National ICT.OPEN (Rotterdam)},
year = {2012},
month = oct,
pdf = {Publications/Codreanu_2012_GPU.pdf},
iwicategory = {other}
}
@InProceedings{Zittersteyn:2012:AVW,
author = {Dirk Zittersteyn and Henk Bekker and Jos B.T.M. Roerdink },
title = {Abstracted Visualization of White Matter Structure with Resampled Weighted Tracts},
booktitle = {Poster session of the National ICT.OPEN (Rotterdam)},
year = {2012},
month = oct,
pdf = {papers/Zittersteyn_2012_AVW.pdf},
iwicategory = {other}
}
@InProceedings{Gronde:2012:MCS,
author = {van de Gronde, Jasper J. and Wilkinson, Michael H.F. and Roerdink, Jos B.T.M.},
title = {Making computers see tensors using mathematical morphology},
booktitle = {Poster session of the National ICT.OPEN (Rotterdam)},
year = 2012,
month = oct,
pdf = {papers/Gronde_2012_MCS.pdf},
iwicategory = {other}
}
@InProceedings{Zwan:2012:SNB,
author = {Matthew van der Zwan and Alexandru Telea and Tobias Isenberg},
title = {{Smooth Navigation Between Nested Spatial Representations}},
booktitle = {Proceedings of the National ICT.OPEN/SIREN Conference (October 22--23, 2012, Rotterdam, The Netherlands)},
year = {2012},
OPTeditor = {},
pages = {140--144},
OPTdoi = {},
url = {http://tobias.isenberg.cc/VideosAndDemos/Zwan2012CNN},
pdf = {papers/Zwan_2012_SNB.pdf},
OPTpublisher = {Advanced School for Computing and Imaging (ASCI)},
OPTaddress = {Delft, The Netherlands},
note = {},
abstract = {We investigate the dedicated control of multiple levels of semantic and sampling-based abstraction in 3D datasets, i.e., different types of data abstractions as opposed to sampling-based abstraction which shows more or less data. This dedicated navigation in the abstraction space facilitates the mental integration of different existing visualization techniques in many application areas including our example domain of fluid simulation. We realize the continuous abstraction control by interpolating between the levels while being able to simultaneously show multiple abstractions. We employ a halo-like shading technique based on distance fields to blend between several levels while continuously navigating between focus and context abstractions. We further add a semantic lens to find focus abstractions close to a user-defined context abstraction. Our entire implementation uses 2D image-based techniques to enable real-time performance, which seamlessly integrates within a 3D visualization tool.},
video = {http://youtu.be/lDMUTl1F8YM&hd=1}
}
@Article{Jalba:2012:GPUSkeletons,
author = {Andrei Jalba and Jacek Kustra and Alexandru Telea},
title = {Surface and Curve Skeletonization of Large {3D} Models on the {GPU}},
journal = {IEEE Transactions of Pattern Analysis and Machine Intelligence},
volume = 35,
number = 6,
pages = {1495-1508},
year = {2013},
pdf = {http://www.cs.rug.nl/~alext/PAPERS/TPAMI12/paper.pdf},
}
@Article{Broeksema:2012:Treemaps,
author = {Thomas Baudel and Bertjan Broeksema},
title = {Capturing the Design Space of Sequential Space-Filling Layouts},
journal = {IEEE Transactions on Visualization and Computer Graphics},
year = {2012},
volume = {18},
number = {12},
month = nov # {/} # dec,
OPTpages = {},
OPTdoi = {http://doi.ieeecomputersociety.org/},
pdf = {http://www.cs.rug.nl/~alext/PAPERS/InfoVis12/paper.pdf},
note = {To appear}
}
@Article{Yu:2012:ESA,
author = {Lingyun Yu and Konstantinos Efstathiou and Petra Isenberg and Tobias Isenberg},
title = {{E}fficient {S}tructure-{A}ware {S}election {T}echniques for {3D} {P}oint {C}loud {V}isualizations with {2DOF} {I}nput},
journal = {IEEE Transactions on Visualization and Computer Graphics},
year = {2012},
volume = {18},
number = {12},
month = nov # {/} # dec,
pages = {2245--2254},
doi = {http://doi.ieeecomputersociety.org/10.1109/TVCG.2012.217},
url = {http://tobias.isenberg.cc/VideosAndDemos/Yu2012ESA},
pdf = {Yu_2012_ESA.pdf},
video = {http://www.youtube.com/watch?v=xqUkXol6oX8&hd=1},
abstract= {Data selection is a fundamental task in visualization because it serves as a pre-requisite to many follow-up interactions. Efficient spatial selection in 3D point cloud datasets consisting of thousands or millions of particles can be particularly challenging. We present two new techniques, TeddySelection and CloudLasso, that support the selection of subsets in large particle 3D datasets in an interactive and visually intuitive manner. Specifically, we describe how to spatially select a subset of a 3D particle cloud by simply encircling the target particles on screen using either the mouse or direct-touch input. Based on the drawn lasso, our techniques automatically determine a bounding selection surface around the encircled particles based on their density. This kind of selection technique can be applied to particle datasets in several application domains. TeddySelection and CloudLasso reduce, and in some cases even eliminate, the need for complex multi-step selection processes involving Boolean operations. This was confirmed in a formal, controlled user study in which we compared the more flexible CloudLasso technique to the standard cylinder-based selection technique. This study showed that the former is consistently more efficient than the latter---in several cases the CloudLasso selection time was half that of the corresponding cylinder-based selection.},
note = {\textbf{Honorable Mention Award at IEEE Scientific Visualization 2012}}
}
@Article{Wood:2012:SRI,
author = {Jo Wood and Petra Isenberg and Tobias Isenberg and Jason Dykes and Nadia Boukhelifa and Aidan Slingsby},
title = {{S}ketchy {R}endering for {I}nformation {V}isualization},
journal = {IEEE Transactions on Visualization and Computer Graphics},
year = {2012},
OPTkey = {},
volume = {18},
number = {12},
month = nov # {/} # dec,
pages = {2749--2758},
doi = {http://doi.ieeecomputersociety.org/10.1109/TVCG.2012.262},
url = {http://tobias.isenberg.cc/VideosAndDemos/Wood2012SRI},
pdf = {Wood_2012_SRI.pdf},
abstract = {We present and evaluate a framework for constructing sketchy style information visualizations that mimic data graphics drawn by hand. We provide an alternative renderer for the Processing graphics environment that redefines core drawing primitives including line, polygon and ellipse rendering. These primitives allow higher-level graphical features such as bar charts, line charts, treemaps and node-link diagrams to be drawn in a sketchy style with a specified degree of sketchiness. The framework is designed to be easily integrated into existing visualization implementations with minimal programming modification or design effort. We show examples of use for statistical graphics, conveying spatial imprecision and for enhancing aesthetic and narrative qualities of visualization. We evaluate user perception of sketchiness of areal features through a series of stimulus-response tests in order to assess users' ability to place sketchiness on a ratio scale, and to estimate area. Results suggest relative area judgment is compromised by sketchy rendering and that its influence is dependent on the shape being rendered. They show that degree of sketchiness may be judged on an ordinal scale but that its judgement varies strongly between individuals. We evaluate higher-level impacts of sketchiness through user testing of scenarios that encourage user engagement with data visualization and willingness to critique visualization design. Results suggest that where a visualization is clearly sketchy, engagement may be increased and that attitudes to participating in visualization annotation are more positive. The results of our work have implications for effective information visualization design that go beyond the traditional role of sketching as a tool for prototyping or its use for an indication of general uncertainty.},
OPTnote = {}
}
@Article{Boukhelifa:2012:ESV,
author = {Nadia Boukhelifa and Anastasia Bezerianos and Tobias Isenberg and Jean-Daniel Fekete},
title = {{E}valuating {S}ketchiness as a {V}isual {V}ariable for the {D}epiction of {Q}ualitative {U}ncertainty},
journal = {IEEE Transactions on Visualization and Computer Graphics},
year = {2012},
OPTkey = {},
volume = {18},
number = {12},
month = nov # {/} # dec,
pages = {2769--2778},
doi = {http://doi.ieeecomputersociety.org/10.1109/TVCG.2012.220},
url = {http://tobias.isenberg.cc/VideosAndDemos/Boukhelifa2012ESV},
pdf = {Boukhelifa_2012_ESV.pdf},
abstract = {We report on results of a series of user studies on the perception of four visual variables that are commonly used in the literature to depict uncertainty. To the best of our knowledge, we provide the first formal evaluation of the use of these variables to facilitate an easier reading of uncertainty in visualizations that rely on line graphical primitives. In addition to blur, dashing and grayscale, we investigate the use of `sketchiness' as a visual variable because it conveys visual impreciseness that may be associated with data quality. Inspired by work in non-photorealistic rendering and by the features of hand-drawn lines, we generate line trajectories that resemble hand-drawn strokes of various levels of proficiency---ranging from child to adult strokes---where the amount of perturbations in the line corresponds to the level of uncertainty in the data. Our results show that sketchiness is a viable alternative for the visualization of uncertainty in lines and is as intuitive as blur; although people subjectively prefer dashing style over blur, grayscale and sketchiness. We discuss advantages and limitations of each technique and conclude with design considerations on how to deploy these visual variables to effectively depict various levels of uncertainty for line marks.},
OPTnote = {}
}
@Article{Isenberg:2012:SSJ,
author = {Tobias Isenberg and Paul Asente and John Collomosse and Sezgin, T. Metin},
title = {{S}pecial {S}ection on the 2011 {J}oint {S}ymposium on {C}omputational Aesthetics ({CAe}), {N}on-{P}hotorealistic {A}nimation and {R}endering ({NPAR}), and {S}ketch-{B}ased {I}nterfaces and {M}odeling ({SBIM})},
journal = {Computers \& Graphics},
year = {2012},
volume = {36},
number = {5},
month = jul,
pages = {},
doi = {http://dx.doi.org/10.1016/j.cag.2012.04.010},
OPTpdf = {papers/Isenberg_2012_SSJ.pdf},
note = {To appear}
}
@Book{BioVis2012:_proc,
title = {Proc. BioVis 2012, Symposium on Biological Data Visualization, Seattle, USA, 14-15 October},
publisher = {IEEE},
year = 2012,
editor = {Matt Hibbs and Jos B. T. M. Roerdink}
}
@Article{kennedy12:_highl_ieee_sympos_biolog_data_visual,
author = {Jessie Kennedy and Jos B.T.M. Roerdink},
title = {{Highlights of the 1st IEEE Symposium on Biological
Data Visualization}},
journal = {BMC Bioinformatics},
year = 2012,
volume = {13(Suppl 8):S1},
doi = {10.1186/1471-2105-13-S8-S1},
url = {http://www.biomedcentral.com/1471-2105/13/S8/S1}
}
@InProceedings{GLIMPS,
author = {L. K. Teune and D. Mudali and R. J. Renken and
B. M. De Jong and M. Segbers and J. B. T. M. Roerdink
and R. A. Dierckx and K. L. Leenders},
title = {{Glucose IMaging in ParkinsonismS}},
booktitle = {16th International Congress of Parkinson's Disease
and Movement Disorders, Dublin, Ireland June 17-21},
year = 2012,
note = {Abstract \# 783}
}
@article{Reniers:2012:SX,
title = {The Solid* Toolset for Software Visual Analytics of Program Structure and Metrics Comprehension: From Research Prototype to Product},
author = {D. Reniers and L. Voinea and O. Ersoy and A. Telea},
journal = {Science of Computer Programming},
publisher = {Elsevier},
year = 2012,
doi = {10.1016/j.scico.2012.05.002},
note = {To appear}
}
@Proceedings{Isenberg:2012:PWD,
title = {Proceedings of the Workshop on Data Exploration on Interactive Surfaces (DEXIS 2011, November 13, 2011, Kobe, Japan)},
editor = {Petra Isenberg and Sheelagh Carpendale and Tobias Hesselmann and Tobias Isenberg and Bongshin Lee},
year = {2012},
publisher = {INRIA},
address = {France},
issn = {0249-6399},
pdf = {http://hal.inria.fr/hal-00659469/PDF/RT-0421.pdf},
url = {http://hal.inria.fr/hal-00659469},
url2 = {http://www.aviz.fr/dexis2011/},
note = {DEXIS proceedings published as INRIA research report \# RR-0421 in May 2012; ISSN 0249-6399},
abstract = {By design, interactive tabletops and surfaces provide numerous opportunities for data visualization and analysis. In information visualization, scientific visualization, and visual analytics, useful insights primarily emerge from interactive data exploration. Nevertheless, interaction research in these domains has largely focused on mouse-based interactions in the past, with little research on how interactive data exploration can benefit from interactive surfaces. These proceedings represent the results of the DEXIS 2011 Workshop on Data Exploration for Interactive Surfaces. It was held in conjunction with the ACM International Conference on Tabletops and Interactive Surfaces (ITS) in Kobe, Japan on November 13, 2011. The introduction summarizes the published papers of the workshop and points to results from workshop discussions. The remainder of the proceedings is made up of the position papers submitted to the workshop.}
}
@InProceedings{Zwan:2012:CNN,
author = {Matthew van der Zwan and Alexandru Telea and Tobias Isenberg},
title = {{C}ontinuous {N}avigation of {N}ested {A}bstraction {L}evels},
booktitle = {Short Paper Proceedings of the EG/IEEE VGTC Conference on Visualization (EuroVis 2012, June 5-8, 2012, Vienna, Austria)},
year = {2012},
editor = {Miriah Meyer and Tino Weinkauf},
pages = {13--17},
doi = {http://dx.doi.org/10.2312/PE/EuroVisShort/EuroVisShort2012/013-017},
url = {http://tobias.isenberg.cc/VideosAndDemos/Zwan2012CNN},
pdf = {Zwan_2012_CNN.pdf},
publisher = {Eurographics Association},
address = {Goslar, Germany},
iwicategory = {other},
video = {http://www.youtube.com/watch?v=lDMUTl1F8YM&hd=1},
OPTnote = {},
abstract = {We investigate the dedicated control of multiple levels of semantic and sampling-based abstraction in 3D datasets, i.e., different types of data abstractions as opposed to sampling-based abstraction which shows more or less data. This dedicated navigation in the abstraction space facilitates the mental integration of different existing visualization techniques in many application areas including our example domain of fluid simulation. We realize the continuous abstraction control by interpolating between the levels while being able to simultaneously show multiple abstractions. We employ a halo-like shading technique based on distance fields to blend between several levels while continuously navigating between focus and context abstractions. We further add a semantic lens to find focus abstractions close to a user-defined context abstraction. Our entire implementation uses 2D image-based techniques to enable real-time performance, which seamlessly integrates within a 3D visualization tool.}
}
@TechReport{Boukhelifa:2012:ESL,
author = {Nadia Boukhelifa and Anastasia Bezerianos and Tobias Isenberg and Jean-Daniel Fekete},
title = {{E}valuating {S}ketchy {L}ines for the {Q}ualitative {V}isualization of {U}ncertainty},
number = {RR-7910},
institution = {INRIA},
address = {France},
year = {2012},
month = mar,
pdf = {Boukhelifa_2012_ESL.pdf},
url2 = {http://hal.inria.fr/hal-00682965},
abstract = {We report on results of a series of user studies on the perception of visual variables that are commonly used in the literature to depict uncertainty. To the best of our knowledge, we provide the first formal evaluation of the use of these variables to facilitate an easier reading of uncertainty in visualizations that rely on line graphical primitives. In addition to blur, dashing and grayscale, we investigate the use of `sketchiness' as a visual variable because it conveys visual impreciseness that may be associated with data quality. Inspired by work in non-photorealistic rendering and by the features of hand-drawn lines, we generate line trajectories that resemble hand-drawn strokes of various levels of proficiency---ranging from child to adult strokes---where the amount of perturbations in the line corresponds to the level of uncertainty in the data. Our results show that sketchiness for the visualization of uncertainty in lines is as intuitive as blur; although people subjectively prefer dashing style over blur, grayscale and sketchiness. We discuss advantages and limitations of each technique and conclude with design considerations on how to deploy these visual variables to effectively depict various levels of uncertainty for line marks.}
}
@Article{Hurter:2012:KDEEB,
author = {Christophe Hurter and Ozan Ersoy and Alexandru Telea},
title = {Graph Bundling by Kernel Density Estimation},
journal = {Computer Graphics Forum},
year = {2012},
volume = {31},
number = {3pt1},
month = jun,
pages = {865--874},
doi = {http://dx.doi.org/10.1111/j.1467-8659.2012.03079.x},
url = {http://www.cs.rug.nl/svcg/Shapes/KDEEB}
}
@Article{Klein:2012:DSD,
author = {Tijmen Klein and Florimond Gu{\'e}niat and Luc Pastur and Fr{\'e}d{\'e}ric Vernier and Tobias Isenberg},
title = {{A} {D}esign {S}tudy of {D}irect-{T}ouch {I}nteraction for {E}xploratory {3D} {F}low {V}isualization},
journal = {Computer Graphics Forum},
year = {2012},
volume = {31},
number = {3},
month = jun,
pages = {1225--1234},
doi = {http://dx.doi.org/10.1111/j.1467-8659.2012.03115.x},
url = {http://tobias.isenberg.cc/VideosAndDemos/Klein2012DSD},
pdf = {Klein_2012_DSD.pdf},
video = {http://www.youtube.com/watch?v=wb7cRwVLkDQ&hd=1},
OPTnote = {},
abstract = {We present an interaction design study of several non-overlapping direct-touch interaction widgets, postures, and bi-manual techniques to support the needs of scientists who are exploring a dataset. The final interaction design supports navigation/zoom, cutting plane interaction, a drilling exploration, the placement of seed particles in 3D space, and the exploration of temporal data evolution. To ground our design, we conducted a requirements analysis and used a participatory design approach throughout development. We chose simulations in the field of fluid mechanics as our example domain and, in the paper, discuss our choice of techniques, their adaptation to our target domain, and discuss how they facilitate the necessary combination of visualization control and data exploration. We evaluated our resulting interactive data exploration system with seven fluid mechanics experts and report on their qualitative feedback. While we use flow visualization as our application domain, the developed techniques were designed with generalizability in mind and we discuss several implications of our work on further development of direct-touch data exploration techniques for scientific visualization in general.}
}
@Book{Telea:RevEng:2012,
title = {Reverse Engineering - Recent Advances and Applications},
publisher = {InTech Publ.},
year = 2012,
editor = {Alexandru C. Telea},
isbn = {978-953-51-0158-1}
}
@InProceedings{Isenberg:2012:GPG,
author = {Tobias Isenberg and Mark Hancock},
title = {{G}estures vs.\ {P}ostures: `{G}estural' {T}ouch {I}nteraction in {3D} {E}nvironments},
booktitle = {Proceedings of the CHI Workshop on ``The 3\textsuperscript{rd} Dimension of CHI: Touching and Designing 3D User Interfaces'' (3DCHI 2012, May 5, 2012, Austin, TX, USA)},
editor = {Ken Anderson and Leena Arhippainen and Hrvoje Benko and de la Rivi{\`e}re, Jean-Baptiste and Jonna H{\"a}kkil{\"a} and Antonio Kr{\"u}ger and Daniel Keefe and Minna Pakanen and Frank Steinicke},
year = {2012},
OPTpublisher = {},
OPTaddress = {},
pages = {53--61},
url = {http://tobias.isenberg.cc/VideosAndDemos/Isenberg2012DTV},
pdf = {Isenberg_2012_GPG.pdf},
abstract= {We revisit the concept of a `gesture' and discuss it, in particular, in the context of 3D interaction. We argue that one should distinguish between postures, quasi-postures, and \emph{gestures} and that the first two should be (and are currently) preferred in 3D interfaces for directly-manipulative interaction with the environment in user-maintained modes. In scientific visualization we saw use cases of quasi-postures, suggesting that they are one way to re-use the same input space in order to facilitate several means of exploration.}
}
@InProceedings{crippa12:_enhan_dti_adapt_tensor_inter,
author = {Alessandro Crippa and Andrei C. Jalba and Jos
B. T. M. Roerdink},
title = {Enhanced DTI tracking with Adaptive Tensor
Interpolation},
booktitle = {Visualization in Medicine and Life Sciences
{II}. Progress and New Challenges},
year = 2012,
pages = {175--192},
editor = {Lars Linsen and Hans Hagen and Bernd Hamann and
Hans-Christian Hege},
series = {Mathematics and Visualization},
publisher = {Springer},
pdf = {http://www.cs.rug.nl/~roe/publications/adaptiveDTI.pdf},
annote = {ISBN: 978-3-642-21607-7}
}
@InProceedings{Telea:Saliency:2012,
author = {Alexandru C. Telea},
title = {Feature Preserving Smoothing of Shapes Using Saliency Skeletons},
booktitle = {Visualization in Medicine and Life Sciences
{II}. Progress and New Challenges},
year = 2012,
pages = {155--172},
editor = {Lars Linsen and Hans Hagen and Bernd Hamann and
Hans-Christian Hege},
series = {Mathematics and Visualization},
publisher = {Springer},
annote = {ISBN: 978-3-642-21607-7}
}
@article{offringa12,
AUTHOR = {A. R. Offringa and J. J. van~de~Gronde and
J. B. T. M. Roerdink},
TITLE = {A morphological algorithm for improving
radio-frequency interference detection},
journal = {Astronomy \& Astrophysics},
year = 2012,
volume = 539,
number = A95,
month = mar,
doi = {http://dx.doi.org/10.1051/0004-6361/201118497},
annote = {AA/2011/18497}
}
@Article{Gerl:2012:SAI,
author = {Moritz Gerl and Peter Rautek and Tobias Isenberg and M. Eduard Gr\"oller},
title = {Semantics by Analogy for Illustrative Volume Visualization},
journal = {Computers \& Graphics},
year = {2012},
abstract = {We present an interactive graphical approach for the explicit specification of semantics for volume visualization. This explicit and graphical specification of semantics for volumetric features allows us to visually assign meaning to both input and output parameters of the visualization mapping. This is in contrast to the implicit way of specifying semantics using transfer functions. In particular, we demonstrate how to realize a dynamic specification of semantics which allows to flexibly explore a wide range of mappings. Our approach is based on three concepts. First, we use semantic shader augmentation to automatically add rule-based rendering functionality to static visualization mappings in a shader program, while preserving the visual abstraction that the initial shader encodes. With this technique we extend recent developments that define a mapping between data attributes and visual attributes with rules, which are evaluated using fuzzy logic. Second, we let users define the semantics by analogy through brushing on renderings of the data attributes of interest. Third, the rules are specified graphically in an interface that provides visual clues for potential modifications. Together, the presented methods offer a high degree of freedom in the specification and exploration of rule-based mappings and avoid the limitations of a linguistic rule formulation.},
volume = {36},
number = {2},
pages = {201--213},
doi = {http://dx.doi.org/10.1016/j.cag.2011.10.006},
url = {http://tobias.isenberg.cc/VideosAndDemos/Gerl2012SAI},
pdf = {Gerl_2012_SAI.pdf},
video = {http://www.youtube.com/watch?v=Mq_qDqPjgQI&hd=1},
note = {}
}
% 2011
@inproceedings{Codreanu:2011:IVP,
title={{I}ncreasing {V}ector {P}rocessor {P}ipeline {E}fficiency with a {T}hread-interleaved {C}ontroller},
author={Codreanu, V. and Petrica, L. and Hobincu, R.},
booktitle={System Theory, Control, and Computing (ICSTCC), 2011 15th International Conference on},
pages={1--4},
year={2011},
organization={IEEE}
}
@Article{Isenberg:2011:ERC,
author = {Tobias Isenberg and Douglas Cunningham},
title = {{E}vent {R}eport: {C}omputational {A}esthetics 2011},
journal = {Computer Graphics Forum},
year = {2011},
volume = {30},
number = {8},
month = dec,
pages = {2457--2458},
doi = {http://dx.doi.org/10.1111/j.1467-8659.2011.02076.x},
}
@PhdThesis{everts11:_visual,
author = {Maarten H. Everts},
title = {Visualization of dense line data},
school = {Johann Bernoulli Institute for Mathematics and
Computer Science},
year = 2011,
month = {December 9},
address = {University of Groningen, The Netherlands},
note = {Promotor: J. B. T. M. Roerdink, copromotores: H.
Bekker, T. Isenberg},
url = {http://irs.ub.rug.nl/ppn/338810471},
}
@PhdThesis{crippa11:_explor,
author = {Alessandro Crippa},
title = {Explorations in the field of brain connectivity.
{Analysis} and visualization},
school = {Johann Bernoulli Institute for Mathematics and
Computer Science},
year = 2011,
month = {September 9},
address = {University of Groningen, The Netherlands},
note = {Promotor: J. B. T. M. Roerdink, copromotor: A. C. Jalba},
}
@PhdThesis{buddelmeijer11:_query,
author = {Hugo Buddelmeijer},
title = {Query driven visualization of large scale
multi-dimensional astronomical catalogs},
school = {Kapteyn Astronomical Institute},
year = 2011,
month = {July 4},
address = {University of Groningen, The Netherlands},
note = {1st promotor: E. A. Valentijn, 2nd promotor:
S. Trager, 3rd promotor: J. B. T. M. Roerdink},
}
@PhdThesis{ferdosi11:_scalab,
author = {Bilkis J. Ferdosi},
title = {Scalable analysis and visualisation of
high-dimensional, astronomical data sets},
school = {Johann Bernoulli Institute for Mathematics and
Computer Science},
year = 2011,
month = {June 24},
address = {University of Groningen, The Netherlands},
note = {1st promotor: J. B. T. M. Roerdink, 2nd promotor:
S. Trager, 3rd promotor: J. M. van der Hulst,
copromotor: M. H. F. Wilkinson},
url = {http://irs.ub.rug.nl/ppn/334237890},
}
@PhdThesis{laan11:_multir_volum_proces_visual_graph_hardw,
author = {Wladimir J. van der Laan},
title = {Multiresolution Volume Processing and Visualization
on Graphics Hardware},
school = {Johann Bernoulli Institute for Mathematics and
Computer Science},
year = 2011,
month = {February 4},
address = {University of Groningen, The Netherlands},
note = {Promotor: J. B. T. M. Roerdink, copromotor:
A. C. Jalba},
}
@InProceedings{Everts:2011:VSD,
author = {Maarten H. Everts and Verstappen, Roel W. C. P. and Henk Bekker and Roerdink, Jos B. T. M. and Tobias Isenberg},
title = {{V}isualizing {S}treamlines using {D}epth-{D}ependent {H}alos},
booktitle = {Posters of the 64\textsuperscript{th} Annual Meeting of the American Physical Society's Division of Fluid Dynamics (November 20--22, 2011, Baltimore, USA)},
year = {2011},
url = {http://tobias.isenberg.cc/VideosAndDemos/Everts2009DDH},
pdf = {papers/Everts_2011_VSD_Poster.pdf},
note = {Poster},
iwicategory = {other},
OPTannote = {}
}
@InProceedings{Chaboissier:2011:RTC,
author = {Jonathan Chaboissier and Tobias Isenberg and Fr{\'e}d{\'e}ric Vernier},
title = {{R}eal{T}ime{C}hess: {L}essons from a {P}articipatory {D}esign {P}rocess for a {C}ollaborative {M}ulti-{T}ouch, {M}ulti-{U}ser {G}ame},
booktitle = {Proceedings of the International ACM Conference on Interactive Tabletops and Surfaces (ITS 2011, November 13--16, 2011, Kobe, Japan)},
year = {2011},
publisher = {ACM Press},
address = {New York},
editor = {Jun Rekimoto and Hideki Koike and Kentaro Fukuchi and Yoshifumi Kitamura and Daniel Wigdor},
pages = {97--106},
doi = {http://dx.doi.org/10.1145/2076354.2076374},
url = {http://tobias.isenberg.cc/VideosAndDemos/Chaboissier2011RTC},
pdf = {Chaboissier_2011_RTC.pdf},
video = {http://www.youtube.com/watch?v=4zN9Eda7n-k&hd=1},
abstract = {We report on a long-term participatory design process during
which we designed and improved RealTimeChess, a collaborative but competitive game that is played using touch input by multiple people on a tabletop display. During the design process we integrated concurrent input from all players and pace control, allowing us to steer the interaction along a continuum between high-paced simultaneous and low-paced turn-based gameplay. In addition, we integrated tutorials for teaching interaction techniques, mechanisms to control territoriality, remote interaction, and alert feedback. Integrating these mechanism during the participatory design process allowed us to examine their effects in detail, revealing for instance effects of the competitive setting on the perception of awareness as well as territoriality. More generally, the resulting application provided us with a testbed to study interaction on shared tabletop surfaces and yielded insights important for other time-critical or attention-demanding applications.} }
@InProceedings{Isenberg:2011:TIS,
author = {Tobias Isenberg},
title = {{P}osition {P}aper: {T}ouch {I}nteraction in {S}cientific {V}isualization},
booktitle = {Proceedings of the Workshop on Data Exploration on Interactive Surfaces (DEXIS 2011, November 13, 2011, Kobe, Japan)},
editor = {Petra Isenberg and Sheelagh Carpendale and Tobias Hesselmann and Tobias Isenberg and Bongshin Lee},
year = {2011},
publisher = {INRIA},
address = {Le Chesnay, France},
pages = {24--27},
pdf = {Isenberg_2011_TIS.pdf},
url = {http://tobias.isenberg.cc/VideosAndDemos/Isenberg2012DTV},
url2 = {http://hal.inria.fr/hal-00659469},
note = {DEXIS proceedings published as INRIA research report \# RR-0421 in May 2012},
abstract = {Direct-touch interaction is receiving an increasing amount of
attention in the HCI domain and has recently been applied to some problems in information visualization. However, the field of scientific visualization has not seen much work on how direct-touch interaction could benefit the interactive visualization process. One reason may be that scientific visualization typically deals with datasets that are defined in 3D space, while touch input is two-dimensional. Therefore, to control scientific datasets in interactive visualizations one has to define intuitive mappings from 2D input to 3D manipulations for a variety of data types and exploration techniques. In this position paper we discuss some of the challenges of using direct-touch interaction in the field of scientific visualization that arise from the specific constraints of scientific visualization and argue for the development of integrated techniques to overcome these problems.} }
@InProceedings{everts11:_flow_visual_illus_line_styles,
author = {Maarten H. Everts and Henk Bekker and Jos
B. T. M. Roerdink and Tobias Isenberg},
title = {Flow Visualization using Illustrative Line Styles},
booktitle = {Proceedings of ICT.Open, ASCI -- IPA -- SIKS tracks,
November 14--15, Veldhoven, The Netherlands)},
year = 2011,
iwicategory = {other},
url = {http://tobias.isenberg.cc/VideosAndDemos/Everts2009DDH},
pdf = {Everts_2011_FVI.pdf},
abstract = {We present a flexible illustrative line style model for the visualization of streamline data. Our model partitions view- oriented line strips into parallel bands whose basic visual properties can be controlled independently. We thus extend previous line stylization techniques specifically for visualization purposes by allowing the parametrization of these bands based on the local line data attributes. We demonstrate the effectiveness of our model by applying it to 3D flow field datasets.},
note = {Paper number 33. \textbf{Nominated for Best Paper}}
}
@article{blom11:_time_resol_trans_bioin_analy,
author = {Evert-Jan Blom and Anja N. J. A. Ridder and Andrzej T. Lulko and Jos B. T. M. Roerdink and Oscar P. Kuipers},
journal = {PLoS ONE},
publisher = {Public Library of Science},
title = {Time-Resolved Transcriptomics and Bioinformatic
Analyses Reveal Intrinsic Stress Responses during
Batch Culture of \emph{Bacillus subtilis} },
year = 2011,
month = 11,
volume = 6,
url = {http://dx.doi.org/10.1371%2Fjournal.pone.0027160},
pages = {e27160},
abstract = { We have determined the time-resolved
transcriptome of the model gram-positive organism
\emph{B. subtilis} during growth in a
batch fermentor on rich medium. DNA microarrays were
used to monitor gene transcription using 10-minute
intervals at 40 consecutive time points. From the
growth curve and analysis of all gene expression
levels, we identified 4 distinct growth phases and
one clear transition point: a lag phase, an
exponential growth phase, the transition point and
the very clearly separated early and late stationary
growth phases. The gene expression profiles suggest
the occurrence of stress responses at specific times
although no external stresses were applied. The
first one is a small induction of the SigB regulon
that occurs at the transition point. Remarkably, a
very strong response is observed for the SigW
regulon, which is highly upregulated at the onset of
the late stationary phase. Bioinformatic analyses
that were performed on our data set suggest several
novel putative motifs for regulator binding. In
addition, the expression profiles of several genes
appeared to correlate with the oxygen
concentration. This data set of the expression
profiles of all \emph{B. subtilis} genes
during the entire growth curve on rich medium
constitutes a rich repository that can be further
mined by the scientific community. },
number = 11,
doi = {10.1371/journal.pone.0027160}
}
@Book{BioVis2011:_proc,
title = {Proc. BioVis 2011, Symposium on Biological Data
Visualization, Providence, Rhode Island, USA, 23-23
October},
publisher = {IEEE},
year = 2011,
editor = {Jessie Kennedy and Jos B. T. M. Roerdink},
isbn = {978-1-4673-0002-5}
}
@InProceedings{Ersoy:2011:Bundles,
author = {Ozan Ersoy and Alexandru Telea},
title = {Graph Edge Bundling by Medial Axes},
booktitle = {Proc. of the Sixteenth Annual Conference of the Advanced School for Computing and Imaging (ASCI/IPA/SIKS, Nov. 14--15, 2011, Veldhoven, The Netherlands)},
year = {2011},
OPTpublisher = {},
OPTaddress = {},
OPTpages = {},
iwicategory = {other},
}
@InProceedings{Hurter:2011:Lens,
author = {Christophe Hurter and Ozan Ersoy and Alexandru Telea},
title = {Generalizing Semantic Lenses for Large Element-based Plots},
booktitle = {Proc. of the Sixteenth Annual Conference of the Advanced School for Computing and Imaging (ASCI/IPA/SIKS, Nov. 14--15, 2011, Veldhoven, The Netherlands)},
year = {2011},
OPTpublisher = {},
OPTaddress = {},
OPTpages = {},
iwicategory = {other},
}
@InProceedings{Everts:2011:ILF,
author = {Maarten H. Everts and Henk Bekker and Roerdink, Jos B. T. M. and Tobias Isenberg},
title = {{I}llustrative {L}ine {S}tyles for {F}low {V}isualization},
booktitle = {Short Paper Proceedings of the 19\textsuperscript{th} Pacific Conference on Computer Graphics and Applications (Pacific Graphics 2011, September 21--23, 2011, Kaohsiung, Taiwan)},
year = {2011},
editors = {Bing-Yu Chen and Jan Kautz and Tong-Yee Lee and Ming C. Lin},
publisher = {Eurographics Association},
address = {Goslar, Germany},
pages = {105--110},
doi = {http://dx.doi.org/10.2312/PE/PG/PG2011short/105-110},
url = {http://tobias.isenberg.cc/VideosAndDemos/Everts2009DDH},
pdf = {papers/Everts_2011_ILF.pdf},
note = {Short paper},
abstract = {We present a flexible illustrative line style model for the visualization of streamline data. Our model partitions view-oriented line strips into parallel bands whose basic visual properties can be controlled independently. We thus extend previous line stylization techniques specifically for visualization purposes by allowing the parametrization of these bands based on the local line data attributes. We demonstrate the effectiveness of our model by applying it to 3D flow field datasets.},
OPTannote = {}
}
@InProceedings{Lueks:2011:SCC,
author = {Wouter Lueks and Ivan Viola and van der Zwan, Matthew and Henk Bekker and Tobias Isenberg},
title = {{S}patially {C}ontinuous {C}hange of {A}bstraction in {M}olecular {V}isualization},
booktitle = {Abstracts of 1\textsuperscript{st} IEEE Symposium on Biological Data Visualization (BioVis 2011, October 23--24, 2011, Providence, RI, USA)},
editor = {Miriah Meyer and Cydney Nielsen},
year = {2011},
publisher = {IEEE Computer Society},
address = {Los Alamitos},
url = {http://tobias.isenberg.cc/VideosAndDemos/Zwan2011IMV},
url2 = {http://www.biovis.net/2011/papers_abstracts/abstracts/131.html},
pdf = {papers/Lueks_2011_SCC.pdf},
note = {Extended abstract and poster, received \textbf{Best Abstract Award at BioVis 2011}},
abstract = {Based on an approach for the temporal change of abstraction in molecular visualization we describe how to achieve a spatially explicit control of abstraction. This allows us to depict different abstraction stages of a single molecule in a single still-image visualization. This approach works best for long, linear molecules with repeating substructures that allow viewers to visually compare the continuous representational changes of these parts.},
iwicategory = {other},
OPTannote = {}
}
@Proceedings{Cunningham:2011:CAE,
title = {Proceedings of the Seventh International Symposium on Computational Aesthetics in Graphics, Visualization, and Imaging (CAe 2011, August 5--7, 2011, Vancouver, Canada)},
editor = {Douglas Cunningham and Tobias Isenberg and Stephen N. Spencer},
year = {2011},
publisher = {ACM Press},
address = {New York},
isbn = {978-1-4503-0908-0},
doi = {http://doi.acm.org/10.1145/2030441},
note = {ISBN 978-1-4503-0908-0},
url = {http://www.computational-aesthetics.org/2011/},
OPTannote = {}
}
@INPROCEEDINGS {crippa11:_data_driven_visual_funct_brain,
AUTHOR = {Alessandro Crippa and Jos B. T. M. Roerdink},
TITLE = {Data-Driven Visualization of Functional Brain
Regions from Resting State fMRI Data},
BOOKTITLE = {Proceedings Vision, Modeling and Visualization
Workshop (VMV), 4-6 Oct, Berlin},
YEAR = 2011,
editor = {Peter Eisert and Konrad Polthier and Joachim
Hornegger},
pdf = {http://www.cs.rug.nl/~roe/publications/fu_fmri.pdf}
}
@inproceedings{broeksema11_treemap,
AUTHOR = {T. Baudel and B. Broeksema},
TITLE = {A generic algorithm for sequential, rectangular, space filling layouts},
booktitle = {Extended abstract and poster presentation, VisWeek 2011},
year = 2011,
pdf = {http://www.cs.rug.nl/~alext/PAPERS/InfoVis11/posterBroeksema.pdf},
iwicategory = {other}
}
@inproceedings{broeksema11_portassist,
AUTHOR = {B. Broeksema and A. Telea},
TITLE = {{PortAssist}: Visual Analysis for Porting Large Code Bases},
booktitle = {Extended abstract and poster presentation, VisWeek 2011},
year = 2011,
iwicategory = {other},
pdf = {http://www.cs.rug.nl/~alext/PAPERS/InfoVis11/poster.pdf}
}
@inproceedings{broeksema11_porting,
AUTHOR = {B. Broeksema and A. Telea},
TITLE = {Visual Support for Porting Large Code Bases},
booktitle = {Proc. IEEE Vissoft},
year = 2011,
pdf = {http://www.cs.rug.nl/~alext/PAPERS/VISSOFT11/paper1.pdf}
}
@inproceedings{reniers11_solidsx,
AUTHOR = {D. Reniers and L. Voinea and A. Telea},
TITLE = {Visual exploration of program structure, dependencies and metrics with {SolidSX}},
booktitle = {Proc. IEEE Vissoft},
year = 2011,
pdf = {http://www.cs.rug.nl/~alext/PAPERS/VISSOFT11/paper2.pdf}
}
@article{ersoy11_sbeb,
AUTHOR = {Ozan Ersoy and Christophe Hurter and Fernando Paulovich and Gabriel Cantareira and Alexandru Telea},
TITLE = {Skeleton-based edge bundling for graph visualization},
journal = {IEEE TVCG},
volume = {17},
number = {12},
pages = {2364--2373},
year = 2011,
pdf = {http://www.cs.rug.nl/~alext/PAPERS/InfoVis11/sbeb.pdf},
}
@article{hurter11_sbeb,
AUTHOR = {Christophe Hurter and Ozan Ersoy and Alexandru Telea},
TITLE = {MoleView: An Attribute and Structure-based Semantic Lens for Large Element-based Plots},
journal = {IEEE TVCG},
volume = {17},
number = {12},
pages = {2600--2609},
year = 2011,
pdf = {http://www.cs.rug.nl/~alext/PAPERS/InfoVis11/moleview.pdf},
}
@InProceedings{roerdink11:_mathem_morph_comput_graph_scien,
author = {Roerdink, Jos B. T. M.},
title = {Mathematical Morphology in Computer Graphics,
Scientific Visualization and Visual Exploration},
booktitle = {Proc. 10th International Symposium on Mathematical
Morphology (ISMM 2011), Intra, Lake Maggiore, Italy},
month = {July 6-8},
year = 2011,
pages = {367--380},
series = {LNCS},
volume = 6671,
publisher = {Springer},
editor = {P. Soille and M. Pesaresi and G.K. Ouzounis},
pdf = {http://www.cs.rug.nl/~roe/publications/mmvis_ismm2011.pdf}
}
@article{ferdosi11:_compar_densit_estim_method_astron_datas,
AUTHOR = {Bilkis J. Ferdosi and Hugo Buddelmeijer and Scott
Trager and Michael H. F. Wilkinson and Jos
B. T. M. Roerdink },
TITLE = {Comparison of Density Estimation Methods for
Astronomical Datasets},
journal = {Astronomy \& Astrophysics},
year = 2011,
volume = 531,
pages = {A114},
doi = {http://dx.doi.org/10.1051/0004-6361/201116878}
}
@Article{Ferdosi:2011:HDvis,
author = {B.J. Ferdosi and J.B.T.M Roerdink},
title = {{V}isualizing {H}igh-{D}imensional {S}tructures by {D}imension {O}rdering and {F}iltering using {S}ubspace {A}nalysis},
journal = {Computer Graphics Forum},
year = {2011},
OPTkey = {},
volume = {30},
number = {3},
month = may,
pages = {1121--1130},
OPTdoi = {},
url = {},
OPTurl2 = {},
pdf = {vizWithSubspace.pdf},
video = {},
OPTannote = {}
}
@Article{Zwan:2011:IMV,
author = {van der Zwan, Matthew and Wouter Lueks and Henk Bekker and Tobias Isenberg},
title = {{I}llustrative {M}olecular {V}isualization with {C}ontinuous {A}bstraction},
journal = {Computer Graphics Forum},
year = {2011},
OPTkey = {},
volume = {30},
number = {3},
month = may,
pages = {683--690},
doi = {http://dx.doi.org/10.1111/j.1467-8659.2011.01917.x },
url = {http://tobias.isenberg.cc/VideosAndDemos/Zwan2011IMV},
OPTurl2 = {},
pdf = {papers/Zwan_2011_IMV.pdf},
video = {http://www.youtube.com/watch?v=4_e76tyQsKQ&hd=1},
abstract = {Molecular systems may be visualized with various degrees of structural abstraction, support of spatial perception, and `illustrativeness.' In this work we propose and realize methods to create seamless transformations that allow us to affect and change each of these three parameters individually. The resulting transitions give viewers a dedicated control of abstraction in illustrative molecular visualization and, consequently, allow them to seamlessly explore the resulting abstraction space for obtaining a fundamental understanding of molecular systems. We show example visualizations created with our approach and report informal feedback on our technique from domain experts.},
OPTannote = {}
}
@article{crippa11:_heuris_sma_sma,
title = {Heuristics for connectivity-based brain parcellation
of {SMA/pre-SMA} through force-directed graph
layout},
journal = {NeuroImage},
volume = 54,
number = 3,
pages = {2176--2184},
year = 2011,
issn = {1053-8119},
doi = {DOI: 10.1016/j.neuroimage.2010.09.075},
url = {http://www.sciencedirect.com/science/article/B6WNP-5161PBP-2/2/5cd9a927cb7ab7e6b81f046742a3352e},
author = {Alessandro Crippa and Leonardo Cerliani and Luca
Nanetti and Jos B.T.M. Roerdink},
keywords = {Diffusion imaging},
keywords = {Tractography},
keywords = {Connectivity},
keywords = {Brain parcellation},
keywords = {Supplementary motor cortex}
}
@InProceedings{telea11_ismm,
author = {A. Telea and A. Jalba},
title = {Voxel-Based Assessment of Printability of 3D Shapes},
booktitle = {Proc. ISMM},
pages = {393--404},
publisher = {Springer},
year = 2011
}
@Article{crippa11:_graph_eeg,
author = {Alessandro Crippa and Natasha M. Maurits and Jos
B. T. M. Roerdink},
title = {Graph averaging as a means to compare multichannel {EEG}
coherence networks and its application to the study of
mental fatigue and neurodegenerative disease},
journal = {Computers \& Graphics},
year = 2011,
abstract = {A method is proposed for quantifying differences between
multichannel EEG coherence networks represented by
functional unit (FU) maps. The approach is based on
inexact graph matching for attributed relational graphs
and graph averaging, adapted to FU-maps. The mean of a set
of input FU-maps is defined in such a way that it not only
represents the mean group coherence during a certain task
or condition but also to some extent displays individual
variations in brain activity. The definition of a mean
FU-map relies on a graph dissimilarity measure which takes
into account both node positions and node or edge
attributes. A visualization of the mean FU-map is used
with a visual representation of the frequency of
occurrence of nodes and edges in the input FUs. This makes
it possible to investigate which brain regions are more
commonly involved in a certain task, by analysing the
occurrence of a FU of the mean graph in the input
FUs. Furthermore, our method gives the possibility to
quantitatively compare individual FU-maps by computing
their distance to the mean FU map. The method is applied
to the analysis of EEG coherence networks in two case
studies, one on mental fatigue and one on patients with
corticobasal ganglionic degeneration (CBGD). The method is
proposed as a preliminary step towards a complete
quantitative comparison, and the real benefit of its
application is still to be proven.},
pdf = {http://www.cs.rug.nl/~roe/publications/EEG_means_CAG.pdf},
volume = 35,
number = 2,
pages = {265--274}
}
@Article{laan11:_accel_wavel_liftin_graph_hardw_cuda,
author = {Wladimir J. van der Laan and Andrei C. Jalba and Jos
B. T. M. Roerdink},
title = {Accelerating Wavelet Lifting on Graphics Hardware using
{CUDA}},
journal = {IEEE Transactions on Parallel and Distributed
Systems},
volume = 22,
issn = {1045-9219},
year = 2011,
pages = {132--146},
doi = {http://doi.ieeecomputersociety.org/10.1109/TPDS.2010.143},
pdf = {http://www.cs.rug.nl/~roe/publications/cudawl.pdf}
}
@Article {laan11:_memor_comput_effic_spars_level_set_method,
author = {Wladimir J. van der Laan and Andrei C. Jalba and Jos
B. T. M. Roerdink},
affiliation = {University of Groningen Johann Bernoulli Institute
for Mathematics and Computer Science P.O. Box 407
9700 AK Groningen The Netherlands},
title = {A Memory and Computation Efficient Sparse Level-Set
Method},
journal = {Journal of Scientific Computing},
publisher = {Springer Netherlands},
issn = {0885-7474},
keyword = {Mathematics and Statistics},
volume = 46,
number = 2,
pages = {243--264},
doi = {http://dx.doi.org/10.1007/s10915-010-9399-5},
abstract = {Since its introduction, the level set method has
become the favorite technique for capturing and
tracking moving interfaces, and found applications
in a wide variety of scientific fields. In this
paper we present efficient data structures and
algorithms for tracking dynamic interfaces through
the level set method. Several approaches which
address both computational and memory requirements
have been very recently introduced. We show that our
method is up to 8.5 times faster than these recent
approaches. More importantly, our algorithm can
greatly benefit from both fine- and coarse-grain
parallelization by leveraging SIMD and/or multi-core
parallel architectures.},
year = 2011
}
@Article{Martin:2011:SDE,
author = {Domingo Mart{\'i}n and Germ{\'a}n Arroyo and M. Victoria Luz{\'o}n and Tobias Isenberg},
title = {{S}cale-{D}ependent and {E}xample-{B}ased {S}tippling},
journal = {Computers \& Graphics},
year = {2011},
volume = {35},
number = {1},
month = feb,
pages = {160--174},
doi = {http://dx.doi.org/10.1016/j.cag.2010.11.006},
url = {http://tobias.isenberg.cc/VideosAndDemos/Martin2010EBS},
pdf = {Martin_2011_SDE.pdf},
OPTnote = {},
abstract = {We present an example-based approach to synthesizing stipple illustrations for static 2D images that produces scale-dependent results appropriate for an intended spatial output size and resolution. We show how treating stippling as a grayscale process allows us to both produce on-screen output and to achieve stipple merging at medium tonal ranges. At the same time we can also produce images with high spatial and low color resolution for print reproduction. In addition, we discuss how to incorporate high-level illustration considerations into the stippling process based on discussions with and observations of a stipple artist. Also, certain features such as edges can be extracted and used to control the placement of dots to improve the result. The implementation of the technique is based on a fast method for distributing dots using halftoning and can be used to create stipple images interactively. We describe both a GPU implementation of the basic algorithm that creates stipple images in real-time for large images and an extended CPU method that allows a finer control of the output at interactive rates.}
}
@Article{Collomosse:2011:SSN,
author = {John Collomosse and Tobias Isenberg},
title = {{S}pecial {S}ection on {N}on-{P}hotorealistic {A}nimation and {R}endering ({NPAR}) 2010},
journal = {Computers \& Graphics},
year = {2011},
volume = {35},
number = {1},
month = feb,
pages = {iv--v},
doi = {http://dx.doi.org/10.1016/j.cag.2010.11.016},
pubimage = {paperimages/Collomosse_2011_SSN.jpg},
pdf = {Collomosse_2011_SSN.pdf},
abstract = {Within this Special Section we are pleased to present extended versions of nine research papers presented at the 6\textsuperscript{th} ACM / Eurographics International Symposium on Non-Photorealistic Animation and Rendering (NPAR 2010) in Annecy, France. This prestigious symposium was established a decade ago in response to the growing interest in NPAR research, and remains a highly competitive publication forum for this specialism. The papers collected herein have been extended from their NPAR 2010 versions through addition of a further significant technical contribution and new results.},
OPTnote = {}
}
% 2010
@InProceedings{Williams:2010:GEG,
author = {David Williams},
title = {Volumetric Representation of Virtual Environments},
booktitle = {Game Engine Gems},
publisher = {Jones and Bartlett Publishers},
chapter = 3,
editor = {Eric Lengyel},
year = 2010
}
@inproceedings{Codreanu:2010:PGD,
title={{P}erformance {G}ain from {D}ata and {C}ontrol {D}ependency {E}limination in {E}mbedded {P}rocessors},
author={Codreanu, V. and Hobincu, R.},
booktitle={Electronics and Telecommunications (ISETC), 2010 9th International Symposium on},
pages={47--50},
year={2010},
organization={IEEE}
}
@inproceedings{Bumbacea:2010:TDA,
title={{T}echnology {D}riven {A}rchitecture for {I}ntegral {P}arallel {E}mbedded {C}omputing},
author={Bumbăcea, P. and Codreanu, V. and Hobincu, R. and Petrică, L. and Ştefan, GM},
booktitle={Semiconductor Conference (CAS), 2010 International},
volume={1},
pages={35--42},
year={2010},
organization={IEEE}
}
@PhdThesis{byelas10:thesis,
author = {Heorhiy Byelas},
title = {Visualization of metrics and areas of interest on software architecture diagrams},
school = {University of Groningen, The Netherlands},
year = 2010,
note = {promotor: A.C. Telea}
}
@InProceedings{wijk10:_evaluat,
author = {Jarke van Wijk and Tobias Isenberg and Jos
B. T. M. Roerdink and Alexandru C. Telea and Michel
Westenberg },
title = {Evaluation},
booktitle = {Mastering The Information Age: Solving Problems with
Visual Analytics},
publisher = {Eurographics Association},
address = {Goslar, Germany},
editor = {Daniel Keim and J\"orn Kohlhammer and Geoffrey Ellis and Florian Mansmann},
chapter = 8,
year = 2010,
pages = {131--144},
isbn = {ISBN 978-3-905673-77-7},
pages = {131--143},
url = {http://www.vismaster.eu/book/chapter-8-evaluation/},
url2 = {http://www.vismaster.eu/book/}
}
@InProceedings{Vlaming:2010:I2M,
author = {Luc Vlaming and Christopher Collins and Mark Hancock and Miguel Nacenta and Tobias Isenberg and Sheelagh Carpendale},
title = {{I}ntegrating {2D} {M}ouse {E}mulation with {3D} {M}anipulation for {V}isualizations on a {M}ulti-{T}ouch {T}able},
booktitle = {Proceedings of the ACM International Conference on Interactive Tabletops and Surfaces 2010 (ITS 2010, November 7--10, 2010, Saarbr{\"u}cken, Germany)},
editor = {Antonio Kr{\"u}ger and Johannes Sch{\"o}ning and Michael Haller and Daniel Wigdor},
year = {2010},
publisher = {ACM},
address = {New York},
pages = {221--230},
url = {http://tobias.isenberg.cc/VideosAndDemos/Vlaming2010I2M},
pdf = {Vlaming_2010_I2M.pdf},
OPTpdf = {http://dl.acm.org/authorize?450445},
doi = {http://dx.doi.org/10.1145/1936652.1936693},
video = {http://www.youtube.com/watch?v=Eb8Qu-Z0ERw&hd=1},
abstract = {We present the Rizzo, a multi-touch virtual mouse that has been designed to provide the fine grained interaction for information visualization on a multi-touch table. Our solution enables touch interaction for existing mouse-based visualizations. Previously, this transition to a multi-touch environment was difficult because the mouse emulation of touch surfaces is often insufficient to provide full information visualization functionality. We present a unified design, combining many Rizzos that have been designed not only to provide mouse capabilities but also to act as zoomable lenses that make precise information access feasible. The Rizzos and the information visualizations all exist within a touch-enabled 3D window management system. Our approach permits touch interaction with both the 3D windowing environment as well as with the contents of the individual windows contained therein. We describe an implementation of our technique that augments the VisLink 3D visualization environment to demonstrate how to enable multi-touch capabilities on all visualizations written with the popular prefuse visualization toolkit.}
}
@Article{Isenberg:2010:ERC,
author = {Tobias Isenberg and Neil Dodgson},
title = {{E}vent {R}eport: {C}omputational {A}esthetics 2010},
journal = {Computer Graphics Forum},
year = {2010},
volume = {29},
number = {6},
month = sep,
pages = {2007},
doi = {http://dx.doi.org/10.1111/j.1467-8659.2010.01821.x}
}
@InProceedings{wilkinson10:_diatom_ident_with_mathem_morph,
author = {Michael Wilkinson and Erik Urbach and Andrei Jalba and Jos
Roerdink},
title = {Diatom identification with mathematical morphology},
booktitle = {Mathematical Morphology},
publisher = {ISTE Ltd, John Wiley \& Sons},
editor = {Laurent Najman and Hugues Talbot},
chapter = 13,
year = 2010,
pages = {357--365}
}
@InProceedings{wilkinson10:_ident,
author = {Michael Wilkinson and Erik Urbach and Andrei Jalba and Jos
Roerdink},
title = {Identification de diatom\'ees par morphologie
math\'ematique},
booktitle = {Morphologie Math\'ematique 2: estimation, choix et mise
en oeuvre},
publisher = {Hermes Science},
editor = {Hugues Talbot and Laurent Najman},
chapter = 7,
year = 2010,
pages = {183--192}
}
@Article{westenberg10:_spotx,
author = {Michel A. Westenberg and Jos B.T.M. Roerdink and
Oscar P. Kuipers and Sacha A.F.T. van Hijum},
title = {{SpotXplore}: a {Cytoscape} plugin for visual
exploration of hotspot expression in gene regulatory
networks},
journal = {Bioinformatics},
year = 2010,
volume = 26,
number = 22,
pages = {2922--2923},
doi = {doi:10.1093/bioinformatics/btq535}
}
@Book{Telea:2010:SOFTVIS,
title = {Proceedings of the 5th ACM/IEEE Symposium on Software Visualization (SOFTVIS 2010)},
publisher = {ACM Press},
year = 2010,
editor = {Alexandru Telea and Carsten Goerg and Steven Reiss and Craig Anslow},
annote = {236 pages}
}
@InProceedings{Reniers:2010:VAToolset,
author = {Dennie Reniers and Lucian Voinea and Ozan Ersoy and Alexandru Telea},
title = {A Visual Analytics Toolset for Program Structure, Metrics, and Evolution Comprehension},
booktitle = {Proceedings of the 3rd Intl. Workshop on Academic Software Development Tools and Techniques (WASDeTT-3)},
year = {2010},
OPTpublisher = {},
OPTaddress = {},
OPTpages = {},
pdf = {Reniers_2010_SVA.pdf},
iwicategory = {other},
note = {to appear}
}
@InProceedings{Ferdosi:2010:Subspace,
author = {Bilkis J. Ferdosi and Hugo Buddelmeijer and Scott Trager and Michael H.F. Wilkinson and Jos B.T.M. Roerdink},
title = {Finding and Visualizing Relevant Subspaces for Clustering
High-Dimensional Astronomical Data using Connected Morphological Operators},
booktitle = {Proceedings of IEEE Conference on Visual Analytics Science and Technology (IEEE VAST), October 2010},
year = {2010},
OPTpublisher = {},
OPTaddress = {},
pages = {35--42},
pdf = {subspaceFindingNew.pdf},
iwicategory = {other},
}
@InProceedings{Ersoy:2010:Bundles,
author = {Ozan Ersoy and Alexandru Telea},
title = {Bundle-Centric Visualization of Compound Digraphs},
booktitle = {Proceedings of the Sixteenth Annual Conference of the Advanced School for Computing and Imaging (ASCI CONFERENCE 2010, November 1--3, 2010, Veldhoven, The Netherlands)},
year = {2010},
OPTpublisher = {},
OPTaddress = {},
OPTpages = {},
iwicategory = {other},
}
@Article{Yu:2010:FDT,
author = {Lingyun Yu and Pjotr Svetachov and Petra Isenberg and Maarten H. Everts and Tobias Isenberg},
title = {{FI3D}: {D}irect-{T}ouch {I}nteraction for the {E}xploration of {3D} {S}cientific {V}isualization {S}paces},
journal = {IEEE Transactions on Visualization and Computer Graphics},
year = {2010},
volume = {16},
number = {6},
month = nov # {/} # dec,
pages = {1613--1622},
pdf = {Yu_2010_FDT.pdf},
doi = {http://doi.ieeecomputersociety.org/10.1109/TVCG.2010.157},
url = {http://tobias.isenberg.cc/VideosAndDemos/Yu2010FDT},
video = {http://www.youtube.com/watch?v=UxknnsutM0c},
abstract = {We present the design and evaluation of FI3D, a direct-touch data exploration technique for 3D visualization spaces. The exploration of three-dimensional data is core to many tasks and domains involving scientific visualizations. Thus, effective data navigation techniques are essential to enable comprehension, understanding, and analysis of the information space. While evidence exists that touch can provide higher-bandwidth input, somesthetic information that is valuable when interacting with virtual worlds, and awareness when working in collaboration, scientific data exploration in 3D poses unique challenges to the development of effective data manipulations. We present a technique that provides touch interaction with 3D scientific data spaces in 7 DOF. This interaction does not require the presence of dedicated objects to constrain the mapping, a design decision important for many scientific datasets such as particle simulations in astronomy or physics. We report on an evaluation that compares the technique to conventional mouse-based interaction. Our results show that touch interaction is competitive in interaction speed for translation and integrated interaction, is easy to learn and use, and is preferred for exploration and wayfinding tasks. To further explore the applicability of our basic technique for other types of scientific visualizations we present a second case study, adjusting the interaction to the illustrative visualization of fiber tracts of the brain and the manipulation of cutting planes in this context.}
}
@InProceedings{Everts:2010:IRD,
author = {Maarten H. Everts and Henk Bekker and Roerdink, Jos B. T. M. and Tobias Isenberg},
title = {{I}llustrative {R}endering of {D}ense {L}ine {D}ata},
booktitle = {Proceedings of the Sixteenth Annual Conference of the Advanced School for Computing and Imaging (ASCI CONFERENCE 2010, November 1--3, 2010, Veldhoven, The Netherlands)},
year = {2010},
OPTpublisher = {},
OPTaddress = {},
OPTpages = {},
iwicategory = {other},
url = {http://tobias.isenberg.cc/VideosAndDemos/Everts2009DDH},
OPTpdf = {papers/Everts_2010_IRD.pdf},
abstract = {We present a technique for the illustrative rendering of 3D line data at interactive frame rates. We create depth-dependent halos around lines to emphasize tight line bundles while less structured lines are de-emphasized. Moreover, the depth-dependent halos combined with depth cueing via line width attenuation increase depth perception, extending techniques from sparse line rendering to the illustrative visualization of dense line data. We demonstrate how the technique can be used, in particular, for illustrating DTI fiber tracts but also show examples from gas and fluid flow simulations and mathematics.},
note = {Paper number 13}
}
@InProceedings{Nijboer:2010:ICF,
author = {Menno Nijboer and Moritz Gerl and Tobias Isenberg},
title = {{I}nteraction {C}oncepts for {F}luid {F}reehand {S}ketching},
booktitle = {Proceedings of the Sixteenth Annual Conference of the Advanced School for Computing and Imaging (ASCI CONFERENCE 2010, November 1--3, 2010, Veldhoven, The Netherlands)},
year = {2010},
OPTpublisher = {},
OPTaddress = {},
OPTpages = {},
iwicategory = {other},
url = {http://tobias.isenberg.cc/VideosAndDemos/Nijboer2010EFG},
pdf = {Nijboer_2010_ICF.pdf},
video = {http://www.youtube.com/watch?v=jQeMTZxqgbE},
abstract = {In this paper, we explore a minimalistic, gesture-based interface for fluid freehand concept sketching with vector graphics. Our approach leverages the advantages of both the GUI and gestural interface paradigms. We describe how to use frame gestures to control rotation, translation, and scale of the drawing canvas and of stroke selections. Based on an implementation of this concept we evaluate our tool with both novices and experts, and report on both its benefits and drawbacks.},
note = {Paper number 12}
}
@InProceedings{Postma:2010:EDS,
author = {Bart Postma and Tobias Isenberg},
title = {{A}n {E}valuation of {D}eferred {S}hading {U}nder {C}hanging {C}onditions},
booktitle = {Proceedings of the Sixteenth Annual Conference of the Advanced School for Computing and Imaging (ASCI CONFERENCE 2010, November 1--3, 2010, Veldhoven, The Netherlands)},
year = {2010},
OPTpublisher = {},
OPTaddress = {},
OPTpages = {},
iwicategory = {other},
url = {http://tobias.isenberg.cc/VideosAndDemos/Postma2010EDS},
OPTpdf = {Postma_2010_EDS.pdf},
abstract = {Deferred shading has gained popularity in recent years, but some aspects about its performance are still unclear. In this work we make an initial evaluation of deferred shading's performance and evaluate it with respect to the number of light sources, the type of light sources, the illumination model, the complexity of the scene, and the influence range of the light sources. We compare measured performance values with each other and also compare them with the performance of traditional shading. The results show that in particular the number of light sources, the type of light sources, and the scene complexity are important factors that influence the performance of deferred shading.},
note = {Paper number 30}
}
@Article{crippa10:_diffus_tensor_imagin_study_audit,
author = {Alessandro Crippa and Cris P. Lanting and Pim van Dijk and
Jos B. T. M. Roerdink},
title = {A Diffusion Tensor Imaging Study on Auditory System and
Tinnitus},
journal = {The Open Neuroimaging Journal},
year = 2010,
volume = 4,
pages = {16--25},
url = {http://benthamscience.com/open/openaccess.php?tonij/articles/V004/16TONIJ.htm},
doi = {http://dx.doi.org/10.2174/1874440001004010016}
}
@InProceedings{crippa10:_graph_averag_as_means_to,
author = {Alessandro Crippa and Natasha M. Maurits and Jos
B. T. M. Roerdink },
title = {{Graph Averaging as a Means to Compare Multichannel EEG
Coherence Networks}},
booktitle = {Eurographics Workshop on Visual Computing for Biology and
Medicine},
editor = {Dirk Bartz and Charl Botha and Joachim Hornegger and Raghu
Machiraju and Alexander Wiebel and Bernhard Preim},
year = 2010,
pages = {33--40},
address = {Leipzig, Germany},
publisher = {Eurographics Association},
pdf = {http://www.cs.rug.nl/~roe/publications/EEG_means.pdf},
doi = {http://dx.doi.org/10.2312/VCBM/VCBM10/033-040},
abstract = {A method is proposed for quantifying differences between
multichannel EEG coherence networks represented by
functional unit (FU) maps. The approach is based on
inexact graph matching for attributed relational graphs
and graph averaging, adapted to FU maps. The mean of a set
of input FU maps is defined in such a way that it not only
represents the mean group coherence during a certain task
or condition but also to some extent displays individual
variations in brain activity. The definition of a mean FU
map relies on a graph dissimilarity measure which takes
into account both node positions and node or edge
attributes. A visualization of the mean FU map is used
with a visual representation of the frequency of
occurrence of nodes and edges in the input FUs. This makes
it possible to investigate which brain regions are more
commonly involved in a certain task, by analysing the
occurrence of an FU of the mean graph in the input
FUs. Furthermore, our method gives the possibility to
quantitatively compare individual FU maps by computing
their distance to the mean FU map.}
}
@Article{Telea10:IEEE_SW,
author = {Aexandru Telea and Lucian Voinea and Hans Sassenburg},
title = {Visual Tools for Software Architecture Understanding: A Stakeholder Perspective},
journal = {IEEE Software (special issue on Software Architecture: Framing Stakeholders' Concerns, Nov/Dec 2010)},
year = 2010,
volume = 27,
number = 6,
pages = {47--53}
}
@InProceedings{Reniers:2010:EuroVis,
author = {Dennie Reniers and Lucian Voinea and Alexandru Telea},
title = {{SolidSX}: A Visual Analysis Tool for Software Maintenance},
booktitle = {Poster Presentations of EuroVis 2010 (June 7--9, Bordeaux, France)},
editor = {Peter M. Hall},
year = {2010},
OPTpublisher = {Eurographics Association},
OPTaddress = {Aire-la-Ville, Switzerland},
url = {http://www.cs.rug.nl/~alext/PAPERS/EuroVis10/poster.pdf},
iwicategory = {other},
note = {Extended abstract and poster}
}
@Article{wink10:_polyp_decom_and_shift_invar,
author = {Alle Meije Wink and Jos B. T. M. Roerdink},
title = {{P}olyphase {D}ecompositions and {S}hift-{I}nvariant {D}iscrete {W}avelet {T}ransforms in the {F}requency {D}omain},
journal = {Signal Processing},
year = 2010,
volume = 90,
number = 6,
month = jun,
pages = {1779--1787},
doi = {http://dx.doi.org/10.1016/j.sigpro.2009.11.022}
}
@InProceedings{Isenberg:2010:CAG,
author = {Tobias Isenberg},
title = {{C}omputational {A}esthetics for {G}eographic {M}aps},
booktitle = {Poster Presentations of Computational Aesthetics in Graphics, Visualization, and Imaging 2010 (CAe 2010, June 14--15, 2010, London, UK)},
editor = {Peter M. Hall},
year = {2010},
iwicategory = {other},
OPTurl = {},
OPTpdf = {Isenberg_2010_CAG.pdf},
abstract = {We explore visual abstraction for the generation of stylized renderings of 2D map data. We employ techniques based on the concept of shape simplification and graph layout. Using data from OpenStreetMap, we show how one can iteratively abstract and thus generate aesthetic renditions of these maps.},
iwicategory = {other},
note = {Extended abstract and poster}
}
@Article{Ersoy:2010:IBEB,
author = {Alexandru Telea and Ozan Ersoy},
title = {Image-Based Edge Bundles: Simplified Visualization of Large
Graphs},
journal = {Computer Graphics Forum},
year = {2010},
volume = {29},
number = {3},
month = jun,
url = {http://www.cs.rug.nl/~alext/PAPERS/EuroVis10/paper.pdf},
pages = {843--852},
doi = {http://dx.doi.org/10.1111/j.1467-8659.2009.01680.x},
note = {\textbf{Second Best Paper Award at EuroVis 2010}}
}
@Article{Svetachov:2010:DCI,
author = {Pjotr Svetachov and Maarten H. Everts and Tobias Isenberg},
title = {{DTI} in {C}ontext: {I}llustrating {B}rain {F}iber {T}racts {I}n {S}itu},
journal = {Computer Graphics Forum},
year = {2010},
volume = {29},
number = {3},
month = jun,
pages = {1024--1032},
doi = {http://dx.doi.org/10.1111/j.1467-8659.2009.01692.x},
url = {http://tobias.isenberg.cc/VideosAndDemos/Svetachov2010DCI},
pdf = {Svetachov_2010_DCI.pdf},
video = {http://www.youtube.com/watch?v=fBWnJMIgjlA&hd=1},
abstract = {We present an interactive illustrative visualization method inspired by traditional pen-and-ink illustration styles. Specifically, we explore how to provide context around DTI fiber tracts in the form of surfaces of the brain, the skull, or other objects such as tumors. These contextual surfaces are derived from either segmentation data or generated using interactive iso-surface extraction and are rendered with a flexible, slice-based hatching technique, controlled with ambient occlusion. This technique allows us to produce a consistent and frame-coherent appearance with precise control over the lines. In addition, we provide context through cutting planes onto which we render gray matter with stippling. Together, our methods not only facilitate the interactive exploration and illustration of brain fibers within their anatomical context but also allow us to produce high-quality images for print reproduction. We provide evidence for the success of our approach with an informal evaluation with domain experts. }
}
@InProceedings{Telea:2010:EuroVast,
author = {Alexandru Telea and Lucian Voinea and Ozan Ersoy},
title = {Visual Analytics in Software Maintenance: Challenges and Opportunities},
booktitle = {Proceedings of the 1\textsuperscript{st} European Symposium on Visual Analytics (EuroVAST)},
year = {2010},
editor = {D. Keim and J. Kohlhammer},
publisher = {Eurographics},
OPTpages = {},
OPTdoi = {},
url = {http://www.cs.rug.nl/~alext/PAPERS/EuroVast10/paper.pdf},
note = {To appear},
OPTannote = {}
}
@InProceedings{Martin:2010:EBS,
author = {Domingo Mart{\'i}n and Germ{\'a}n Arroyo and M. Victoria Luz{\'o}n and Tobias Isenberg},
title = {{E}xample-{B}ased {S}tippling using a {S}cale-{D}ependent {G}rayscale {P}rocess},
booktitle = {Proceedings of the Eighth International Symposium on Non-Photorealistic Animation and Rendering (NPAR 2010, June 7--10, 2010, Annecy, France)},
year = {2010},
editor = {John Collomosse and Morgan McGuire},
publisher = {ACM Press},
address = {New York},
pages = {51--61},
doi = {http://doi.acm.org/10.1145/1809939.1809946},
url = {http://tobias.isenberg.cc/VideosAndDemos/Martin2010EBS},
abstract = {We present an example-based approach to synthesizing stipple illustrations for static 2D images that produces scale-dependent results appropriate for an intended spatial output size and resolution. We show how treating stippling as a grayscale process allows us to both produce on-screen output and to achieve stipple merging at medium tonal ranges. At the same time we can also produce images with high spatial and low color resolution for print reproduction. In addition, we discuss how to incorporate high-level illustration considerations into the stippling process based on discussions with and observations of a stipple artist. The implementation of the technique is based on a fast method for distributing dots using halftoning and can be used to create stipple images interactively. },
pdf = {Martin_2010_EBS.pdf}
}
@InProceedings{Nijboer:2010:EFG,
author = {Menno Nijboer and Moritz Gerl and Tobias Isenberg},
title = {{E}xploring {F}rame {G}estures for {F}luid {F}reehand {S}ketching},
booktitle = {Proceedings of the Sketch Based Interfaces and Modeling Symposium (SBIM 2010, June 7--10, 2010, Annecy, France)},
editor = {Do, Ellen Yi-Luen and Marc Alexa},
OPTseries = {},
year = {2010},
publisher = {Eurographics Association},
address = {Aire-la-Ville, Switzerland},
pages = {57--62},
doi = {http://dx.doi.org/10.2312/SBM/SBM10/057-062},
url = {http://tobias.isenberg.cc/VideosAndDemos/Nijboer2010EFG},
pdf = {Nijboer_2010_EFG.pdf},
video = {http://www.youtube.com/watch?v=jQeMTZxqgbE},
abstract = {In this paper, we explore a minimalistic gesture-based interface for fluid freehand concept sketching with vector graphics. Our approach leverages the advantages of both the GUI and gestural interface paradigms. We describe how to use frame gestures to control rotation, translation, and scale of the drawing canvas and of stroke selections. Based on an implementation of this concept we evaluate our tool with both novices and experts, and report on both its benefits and drawbacks.},
video = {http://www.youtube.com/watch?v=jQeMTZxqgbE}
}
@Proceedings{CoVIS:2009:PRO,
title = {Proceedings of the IEEE VisWeek Workshop on Collaborative Visualization on Interactive Surfaces (CoVIS 2009, October 11, 2009, Atlantic City, NJ, USA)},
OPTcrossref = {},
OPTkey = {},
editor = {Petra Isenberg and Michael Sedlmair and Dominikus Baur and Tobias Isenberg and Andreas Butz},
year = {2010},
publisher = {University of Munich, Germany, Department of Computer Science, Media Informatics Group},
address = {Munich},
issn = {1862-5207},
url = {http://www.medien.ifi.lmu.de/pubdb/publications/pub/isenberg2010covis/isenberg2010covis.pdf},
url2 = {http://www.medien.ifi.lmu.de/team/dominikus.baur/files/covis09/},
note = {Proceedings published in April 2010 as a University of Munich technical report \# LMU-MI-2010-2; ISSN 1862-5207},
abstract = {This report provides an overview of current research trends in the field of collaborative visualization on interactive surfaces. It is based on a workshop (CoVIS 2009) held at VisWeek 2009 and consists of three main parts: (i) the preface of authors, motivating and clarifying the underlying challenges; (ii) a research agenda which we derived from fruitful discussions during the workshop; and (iii) the peer-reviewed papers which were presented at the workshop. The report comprises interdisciplinary aspects form the fields of information visualization, scientific visualization, visual analytics as well as CSCW and HCI. It is meant to help other researchers better understand the role and the growing impact of interactive surfaces as an emerging technology for supporting collaborative visualization and visual analytics settings.},
OPTannote = {}
}
@InProceedings{Hancock:2010:SST,
author = {Mark Hancock and Thomas ten Cate and Sheelagh Carpendale and Tobias Isenberg},
title = {{S}upporting {S}andtray {T}herapy on an {I}nteractive {T}abletop},
booktitle = {Proceedings of the 28\textsuperscript{th} ACM Conference on Human Factors in Computing Systems (CHI 2010, April 10--15, 2010, Atlanta, Georgia, USA)},
editor = {Geraldine Fitzpatrick and Scott Hudson and Keith Edwards and Tom Rodden and Elizabeth Mynatt},
year = {2010},
publisher = {ACM Press},
address = {New York},
pages = {2133--2142},
doi = {http://doi.acm.org/10.1145/1753326.1753651},
video = {http://vimeo.com/6248640},
url = {http://tobias.isenberg.cc/VideosAndDemos/Hancock2010SST},
abstract = {We present the iterative design of a virtual sandtray application for a tabletop display. The purpose of our prototype is to support sandtray therapy, a form of art therapy typically used for younger clients. A significant aspect of this therapy is the insight gained by the therapist as they observe the client interact with the figurines they use to create a scene in the sandtray. In this manner, the therapist can gain increased understanding of the client's psyche. We worked with three sandtray therapists throughout the evolution of our prototype. We describe the details of the three phases of this design process: initial face-to-face meetings, iterative design and development via distance collaboration, and a final face-to-face feedback session. This process revealed that our prototype was sufficient for therapists to gain insight about a person's psyche through their interactions with the virtual sandtray.},
pdf = {Hancock_2010_SST.pdf}
}
@Article{berg10:_neurop_plaus_popul_code_model,
author = {Ronald van den Berg and Roerdink, Jos B. T. M. and Frans
W. Cornelissen},
journal = {PLoS Comput Biol},
publisher = {Public Library of Science},
title = {A Neurophysiologically Plausible Population Code Model for
Feature Integration Explains Visual Crowding},
year = 2010,
month = jan,
volume = {6},
doi = {http://dx.doi.org/10.1371/journal.pcbi.1000646},
pages = {e1000646},
abstract = {Visual crowding refers to
the phenomenon that objects become more difficult to
recognize when other objects surround them. Recently there
has been an explosion of studies on crowding, driven, in
part, by the belief that understanding crowding will help
to understand a range of visual behaviours, including
object recognition, visual search, reading, and texture
recognition. Given the long-standing interest in the topic
and its relevance for a wide range of research fields, it
is quite surprising that after nearly a century of
research the mechanisms underlying crowding are still as
poorly understood as they are today. A nearly complete
lack of quantitative models seems to be one of the main
reasons for this. Here, we present a mathematical,
biologically motivated model of feature integration at the
level of neuron populations. Using simulations, we
demonstrate that several fundamental properties of the
crowding effect can be explained as the by-product of an
integration mechanism that may have a function in contour
integration. Altogether, these results help differentiate
between earlier theories about both the neural and
functional origin of crowding.},
number = {1}
}
@MastersThesis{Gronde:2010:HQS,
author = {Jasper van de Gronde},
title = {A High Quality Solver for Diffusion Curves},
school = {University of Groningen},
year = 2010,
month = dec,
type = {Master's thesis},
url = {https://code.launchpad.net/~jaspervdg/+junk/aem-diffusion-curves},
pdf = {Gronde_2010_HQS.pdf}
}
% 2009
@InProceedings{roerdink09:_morph,
author = {Jos B. T. M. Roerdink},
title = {Adaptivity and group invariance in mathematical morphology},
booktitle = {Proc. ICIP'2009 (Int. Conf. Image Processing),
Cairo, Egypt, Nov. 7-10},
pages = {2253--2256},
year = 2009,
url = {http://www.cs.rug.nl/~roe/publications/adapt-invar-mm-icip09.pdf},
doi = {http://dx.doi.org/10.1109/ICIP.2009.5413983}
}
@PhdThesis{blom09:_comput_genom_for_prokar,
author = {Evert-Jan Blom},
title = {Computational genomics for prokaryotes},
school = {University of Groningen, The Netherlands},
year = 2009,
note = {1st promotor: O.P. Kuipers (Molecular Genetics, University
of Groningen), 2\textsuperscript{nd} promotor: J.B.T.M. Roerdink},
month = {December 11}
}
@Article{blom09:_motif,
author = {Evert-Jan Blom and Jos B. T. M. Roerdink and Oscar
P. Kuipers and Sacha A. F. T. van Hijum},
title = {{MOTIFATOR}: detection and characterization of
regulatory motifs using prokaryote transcriptome
data},
journal = {Bioinformatics},
year = 2009,
volume = 25,
number = 4,
pages = 550,
doi = {http://dx.doi.org/10.1093/bioinformatics/btp013}
}
@PhdThesis{berg09:_percep_inter_in_human_vision,
author = {Ronald van den Berg},
title = {Perceptual Interactions in Human Vision and Implications
for Information Visualization},
school = {Institute of Mathematics and Computing Science},
year = 2009,
month = {October 16},
address = {University of Groningen, The Netherlands}
}
@Article{bekker09:_reduc_time_compl_and_ident,
author = {Henk Bekker and Axel A. Brink and Jos B. T. M. Roerdink},
title = {Reducing the time complexity and identifying ill-posed
problem instances of {Minkowski} sum based similarity
calculations},
journal = {International Journal of Computational Geometry and
Applications},
year = 2009,
volume = 19,
number = 5,
pages = {441--456},
month = oct,
doi = {http://dx.doi.org/10.1142/S0218195909003064},
pdf = {http://www.cs.rug.nl/~roe/publications/ijcga07.pdf},
abstract = {To calculate the Minkowski-sum based similarity measure of
two convex polyhedra, many relative orientations have to
be considered. These relative orientations are
characterized by the fact that some faces and edges of the
polyhedra are parallel. For every relative orientation of
the polyhedra, the volume or mixed volume of their
Minkowski sum is evaluated. From the minimum of this
volume, the similarity measure is calculated. In this
article two issues are addressed. First, we propose and
test a method to reduce the set of relative orientations
to be considered by using geometric inequalities in the
slope diagrams of the polyhedra. In this way, the time
complexity of O(n6) is reduced to O(n4.5). Secondly, we
determine which relative orientation problems are
ill-posed and may be skipped because they do not maximize
the similarity measure. }
}
@InProceedings{Ferdosi:2009:CDEMA,
author = {B.J. Ferdosi and H. Buddelmeijer and A. Helmi and S.C. Trager and E.A. Valentijn and M.H.F. Wilkinson and J.M. van der Hulst and J.B.T.M. Roerdink},
title = {Comparison of Density Estimation Methods for Astronomical Datasets},
booktitle = {SIREN: Scientific ICT Research Event Netherlands, November 5, 2009, University of Twente},
year = 2009,
note = {Poster},
pdf = {Ferdosi_2009_CDEMA.pdf},
iwicategory = {other},
abstract = {We study the performance of four density estimation techniques. density estimators are applied to six artificial datasets (ad 1-6) and on two astronomical datasets (mgs 1 and 2) derived from the Millennium galaxy sample(mgs) using a Monte Carlo process. We compared the performance of the methods in two ways: first, by measuring the mean squared error and Kullback--Leibler divergence of each of the methods; second, by the visualization of density fields. The results show that the adaptive kernel based methods perform better than the other methods in terms of calculating the density properly.}
}
@InProceedings{Yu:2009:EOT,
author = {Lingyun Yu and Tobias Isenberg},
title = {{E}xploring {O}ne- and {T}wo-{T}ouch {I}nteraction for {3D} {S}cientific {V}isualization {S}paces},
booktitle = {Posters of Interactive Tabletops and Surfaces (ITS 2009, November 23--25, 2009, Banff, Alberta, Canada)},
editor = {Mark Ashdown and Mark Hancock},
year = 2009,
note = {Extended abstract and poster},
video = {http://www.youtube.com/watch?v=xKiynW-nklw},
iwicategory = {other},
pdf = {Yu_2009_EOT.pdf},
url = {http://tobias.isenberg.cc/VideosAndDemos/Yu2010FDT},
video = {http://www.youtube.com/watch?v=UxknnsutM0c},
abstract = {For exploring large 3D datasets, scientists often have to interactively navigate through and explore large single 3D spaces. We explore the use of large and touch-sensitive displays for this task. In particular, we provide means to control 7 degrees of freedom for exploring these spaces with both dual-touch and single-touch interaction. Our single-touch interaction makes use of the visualization's frame and provides means for precise control for all 7 degrees of freedom.}
}
@Article{Everts:2009:DDH,
author = {Maarten H. Everts and Henk Bekker and Jos B.T.M. Roerdink and Tobias Isenberg},
title = {{D}epth-{D}ependent {H}alos: {I}llustrative {R}endering of {D}ense {L}ine {D}ata},
journal = {IEEE Transactions on Visualization and Computer Graphics},
year = {2009},
volume = {15},
number = {6},
month = nov # {/} # dec,
pages = {1299--1306},
pdf = {Everts_2009_DDH.pdf},
doi = {http://doi.ieeecomputersociety.org/10.1109/TVCG.2009.138},
url = {http://tobias.isenberg.cc/VideosAndDemos/Everts2009DDH},
video = {http://www.youtube.com/watch?v=UF4ZYDj2C5k&hd=1},
abstract = {We present a technique for the illustrative rendering of 3D line data at interactive frame rates. We create depth-dependent halos around lines to emphasize tight line bundles while less structured lines are de-emphasized. Moreover, the depth-dependent halos combined with depth cueing via line width attenuation increase depth perception, extending techniques from sparse line rendering to the illustrative visualization of dense line data. We demonstrate how the technique can be used, in particular, for illustrating DTI fiber tracts but also show examples from gas and fluid flow simulations and mathematics as well as describe how the technique extends to point data. We report on an informal evaluation of the illustrative DTI fiber tract visualizations with domain experts in neurosurgery and tractography who commented positively about the results and suggested a number of directions for future work.},
note = {\textbf{Best Paper Award at IEEE Visualization 2009}}
}
@InProceedings{Telea:2009:DSP,
author ={Alexandru Telea and Ozan Ersoy and Hessel Hoogendorp and Dennie Reniers},
title ={Comparison of Node-Link and Hierarchical Edge Bundling Layouts: A User Study},
booktitle ={Visualization and Monitoring of Network Traffic},
year ={2009},
editor ={Daniel A. Keim and Aiko Pras and J{\"u}rgen Sch{\"o}nw{\"a}lder and Pak Chung Wong},
number ={09211},
series ={Dagstuhl Seminar Proceedings},
ISSN ={1862-4405},
publisher ={Schloss Dagstuhl - Leibniz-Zentrum fuer Informatik, Germany},
address ={Dagstuhl, Germany},
URL ={http://drops.dagstuhl.de/opus/volltexte/2009/2154}
}
@InProceedings{Yu:2009:IVC,
author = {Lingyun Yu and Tobias Isenberg},
title = {Interactive Visualization of Cosmological Simulations},
booktitle = {SIREN: Scientific ICT Research Event Netherlands
(November 5, 2009, University of Twente, The Netherlands)},
year = 2009,
note = {Poster},
pdf = {Yu_2009_IVC.pdf},
iwicategory = {other},
url = {http://tobias.isenberg.cc/VideosAndDemos/Yu2010FDT},
video = {http://www.youtube.com/watch?v=UxknnsutM0c},
abstract = {We combine visualization techniques (SciVis & InfoVis) with innovative interaction capabilities (touch-sensetive & large displays) for very large, time-dependend astronomical datasets. Interaction methods (in 3D space and per frame) are provided to support scientifiic analysis. We explore a combined display of a spatial plot and specialized visualizations, such as parallel coordinate- or scatter-plots and provide methods to interact with those plots.}
}
@InProceedings{Gerl:2009:IAH,
author = {Moritz Gerl and Tobias Isenberg},
title = {Image Analysis on Hatching Drawings},
booktitle = {SIREN: Scientific ICT Research Event Netherlands,
(November 5, 2009, University of Twente, The Netherlands)},
year = 2009,
note = {Poster},
pdf = {Gerl_2009_IAH.pdf},
iwicategory = {other},
abstract = {This work applies image analysis techniques to pen-and-ink hatching drawings. A sample hatching illustration is decomposed into regions and strokes. A vectorized representation of the hatching strokes is created, enabling measurements such as the local width or direction along the strokes. This forms the basis for capturing the drawing style in a sample illustration within our approach dedicated to the automated generation of hatching drawings by example.}
}
@InProceedings{Everts:2009:IRo,
author = {Maarten H. Everts and Henk Bekker and Jos B.T.M. Roerdink and Tobias Isenberg},
title = {Illustrative Rendering of Dense Line Data using Depth-Dependent Halos},
booktitle = {SIREN: Scientific ICT Research Event Netherlands,
(November 5, 2009, University of Twente, The Netherlands)},
year = 2009,
note = {Poster. \textbf{Best Poster Award at SIREN 2009}},
video = {http://www.youtube.com/watch?v=UF4ZYDj2C5k&hd=1},
pdf = {Everts_2009_IRo.pdf},
iwicategory = {other},
abstract = {Illustrative depictions have been playing an essential role in the communication of knowledge for centuries. Despite being limited to two ``colors,'' black-and-white illustrations can convey shape material, and illumination. Such blackand-white illustrations often have a certain clarity and crispness and are very suitable for use in print. Our goal: illustrative black-and-white visualization of dense line data with the same clarity and crispness.}
}
@InProceedings{Isenberg:2009:SDT,
author = {Tobias Isenberg and Uta Hinrichs and Sheelagh Carpendale},
title = {{S}tudying {D}irect-{T}ouch {I}nteraction for {2D} {F}low {V}isualization},
booktitle = {Workshop on Collaborative Visualization on Interactive Surfaces (CoVIS 2009, October 11, 2009, Atlantic City, USA)},
editor = {Petra Isenberg and Michael Sedlmair and Dominikus Baur and Tobias Isenberg and Andreas Butz},
year = {2009},
iwicategory = {other},
pdf = {Isenberg_2009_SDT.pdf},
abstract = {Traditionally, scientific visualization research concentrates on the development and improvement of interactive techniques to support expert data analysis. While many scientific visualization tools have been developed for desktop environments and individual use, scenarios that go beyond mouse and keyboard interaction have received considerably less attention. We present a study that investigates how large-display direct-touch interaction affects data exploration and insight generation among groups of non-experts exploring 2D vector data. In this study, pairs of participants used interaction techniques to customize and explore 2D vector visualizations and collaboratively discussed the process to develop their own understanding of the data sets.}
}
@InProceedings{Laan:2009:AWB,
author = {Wladimir J. van der Laan and Andrei C. Jalba and Jos B.T.M. Roerdink},
title = {{A}ccelerating {W}avelet-{B}ased {V}ideo {C}oding on {G}raphics {H}ardware using {CUDA}},
booktitle = {Proc. 6th International Symposium on
Image and Signal Processing and Analysis (ISPA 2009, September 16--18, Salzburg, Austria)},
year = 2009,
editor = {Peter Zinterhof and Sven Lončarić and Andreas Uhl and Alberto Carini},
pages = {614--619},
abstract = {The Discrete Wavelet Transform (DWT) has a wide range of applications from signal processing to video and image compression. This transform, by means of the lifting scheme, can be performed in a memory and computation efficient way on modern, programmable GPUs, which can be regarded as massively parallel co-processors through NVidia's CUDA compute paradigm. The method is scalable and the fastest GPU implementation among the methods considered. We have integrated our DWT into the Dirac Wavelet Video Codec (DWVC), of which the overlapped block motion compensation compensation and frame arithmetic have been accelerated using CUDA as well.},
pdf = {Laan_2009_AWB.pdf}
}
@InProceedings{Everts:2009:VWM,
author = {Maarten H. Everts and Henk Bekker and Jos B.T.M. Roerdink},
title = {{V}isualizing {W}hite {M}atter {S}tructure of the {B}rain using {D}ijkstra's {A}lgorithm},
booktitle = {Proc. 6th International Symposium on
Image and Signal Processing and Analysis (ISPA 2009, September 16--18, Salzburg, Austria)},
year = 2009,
editor = {Peter Zinterhof and Sven Lončarić and Andreas Uhl and Alberto Carini},
pages = {575--580},
abstract = {An undirected weighted graph may be constructed from diffusion weighted
magnetic resonance imaging data. Every node represents a voxel and the
edge weights between nodes represent the white matter connectivity between
neighboring voxels. In this paper we propose and test a new method for
calculating trajectories of fiber bundles in the brain by applying
Dijkstra's shortest path algorithm to the weighted graph. Subsequently,
the resulting tree structure is pruned, showing the main white matter
structures of the brain. The time consumption of this method is in the
order of seconds.},
pdf = {Everts_2009_VWM.pdf}
}
@InProceedings{jalba09:_effic_morph_activ_surfac_model,
author = {A. C. Jalba and J. B. T. M. Roerdink},
title = {An efficient morphological active surface model for
volumetric image segmentation},
booktitle = {Proc. 9th International Symposium on Mathematical
Morphology and its Application to Signal and Image
processing, Groningen},
month = {Aug 24-27},
year = 2009,
editor = {M. H. F. Wilkinson and J. B. T. M. Roerdink},
url = {http://www.springer.com/978-3-642-03612-5},
pdf = {http://www.cs.rug.nl/~roe/publications/morph_segm_ismm09.pdf},
pages = {193--204}
} @Book{wilkinson09:_mathem_morph_and_its_applic,
title = {Mathematical Morphology and its Application to Signal and
Image Processing},
publisher = {Springer},
year = 2009,
editor = {Michael H. F. Wilkinson and Jos B. T. M. Roerdink},
series = {Lecture Notes in Computer Science},
volume = 5720,
url = {http://www.springer.com/978-3-642-03612-5},
annote = {ISSN 0302-9743, 319 pp.}
}
@InProceedings{Nijboer:2009:ICD,
author = {Menno Nijboer and Moritz Gerl and Tobias Isenberg},
title = {{I}nteraction {C}oncepts for {D}igital {C}oncept {S}ketching},
booktitle = {Posters of the Seventh International Symposium on Non-Photorealistic Animation and Rendering (NPAR 2009, August 1--2, 2009, New Orleans, USA)},
editor = {Holger Winnem{\"o}ller and Marc Nienhaus},
year = {2009},
pdf = {Nijboer_2009_ICD.pdf},
url = {http://tobias.isenberg.cc/VideosAndDemos/Nijboer2010EFG},
iwicategory = {other},
abstract = {While interfaces for digital painting have been investigated in some detail, interaction dedicated for digital drawing and sketching has not received as much attention. We therefore explore new interaction concepts for digital drawing and present a system tailored to freehand sketching with a pen tablet. Because the interfaces of traditional graphics software are often complex and not aimed toward fluid freehand sketching, our goal is to provide a minimal and intuitive interface that meets the demands of this task. To this end and inspired by recent work on interfaces in sketch-based modeling and NPR, we reduce the complexity of the interface and the need for explicit mode changes. We employ location-sensitive, gestural control for the placement and orientation of the canvas, introduce an analogue gestural control for transformation of strokes which allows people to directly access basic stroke transformations, and extend brush-based editing tools for locally redefining the shape of strokes.},
note = {Extended abstract and poster}
}
@Article{Meraj:2009:AMU,
author = {Zainab Meraj and Brian Wyvill and Tobias Isenberg and Amy Gooch and Richard Guy},
title = {{A}utomatically {M}imicking {U}nique {H}and-{D}rawn {P}encil {L}ines},
journal = {Computers \& Graphics},
volume = {33},
number = {4},
year = {2009},
month = aug,
url = {http://tobias.isenberg.cc/VideosAndDemos/Meraj2008MHD},
doi = {http://dx.doi.org/10.1016/j.cag.2009.04.004},
pdf = {Meraj_2009_AMU.pdf},
abstract = {In applications such as architecture, early design sketches containing accurate line drawings often mislead the target audience. Approximate human-drawn sketches are typically accepted as a better way of demonstrating fundamental design concepts. To this end we have designed an algorithm that creates lines that perceptually resemble human-drawn lines. Our algorithm works directly with input point data and a physically-based mathematical model of human arm movement. Our algorithm generates unique lines of arbitrary length given the end points of a line, without relying on a database of human-drawn lines. We found that an observational analysis obtained through various user studies of human lines made a bigger impact on the algorithm than a statistical analysis. Additional studies have shown that the algorithm produces lines that are perceptually indistinguishable from that of a hand-drawn straight pencil line. A further expansion to the system resulted in mimicked dashed lines.},
pages = {496--508}
}
@Proceedings{NPAR:2009:PRO,
title = {Proceedings of the Seventh International Symposium on Non-Photorealistic Animation and Rendering (NPAR 2009, August 1--2, 2009, New Orleans, USA)},
editor = {Tobias Isenberg and Craig Kaplan and Stephen N. Spencer},
year = {2009},
publisher = {ACM Press},
address = {New York},
isbn = {978-1-60558-604-5},
doi = {http://doi.acm.org/10.1145/1572614},
url = {http://www.npar.org/2009/},
note = {ISBN 978-1-60558-604-5}
}
@InProceedings{Kim:2009:SE,
author = {SungYe Kim and Ross Maciejewski and Tobias Isenberg and William M. Andrews and Wei Chen and Costa Sousa, Mario and David S. Ebert},
title = {{S}tippling {B}y {E}xample},
booktitle = {Proceedings of the Seventh International Symposium on Non-Photorealistic Animation and Rendering (NPAR 2009, August 1--2, 2009, New Orleans, USA)},
editor = {Tobias Isenberg and Craig Kaplan and Stephen N. Spencer},
year = {2009},
publisher = {ACM Press},
address = {New York},
url = {http://tobias.isenberg.cc/VideosAndDemos/Kim2009SBE},
pdf = {Kim_2009_SE.pdf},
pages = {41--50},
abstract = {In this work, we focus on stippling as an artistic style and discuss our technique for capturing and reproducing stipple features unique to an individual artist. We employ a texture synthesis algorithm based on the gray-level co-occurrence matrix (GLCM) of a texture field. This algorithm uses a texture similarity metric to generate stipple textures that are perceptually similar to input samples, allowing us to better capture and reproduce stipple distributions. First, we extract example stipple textures representing various tones in order to create an approximate tone map used by the artist. Second, we extract the stipple marks and distributions from the extracted example textures, generating both a lookup table of stipple marks and a texture representing the stipple distribution. Third, we use the distribution of stipples to synthesize similar distributions with slight variations using a numerical measure of the error between the synthesized texture and the example texture as the basis for replication. Finally, we apply the synthesized stipple distribution to a 2D grayscale image and place stipple marks onto the distribution, thereby creating a stippled image that is statistically similar to images created by the example artist.},
doi = {http://doi.acm.org/10.1145/1572614.1572622}
}
@Article{telea09:cost,
author = {Alexandru Telea and Lucian Voinea},
title = {Visual Software Analytics for the Build Optimization of Large-Scale Software Systems},
journal = {Computational Statistics},
year = 2009,
publisher = {Springer},
note = {accepted}
}
@Article{telea09:eswe,
author = {Lucian Voinea and Alexandru Telea},
title = {Visual Querying and Analysis of Large Software
Repositories},
journal = {Empirical Software Engineering},
year = 2009,
volume = 14,
number = 3,
pages = {316--340},
}
@InProceedings{Gonzalez09IWPSE,
author = {Antonio Gonzalez and Roberto Theron and Alexandru Telea and Francisco Garcia},
title = {{The visualization of the evolution of software project structures and metrics}},
booktitle = {{Proc. Intl. Workshop of Principles of Software Evolution (IWPSE)}},
year = 2009,
publisher = {IEEE},
note = {to appear}
}
@Article{telea09iv,
author = {Alexandru Telea},
title = {{Introduction to the special issue of selected
papers from SOFTVIS 2008}},
journal = {Information Visualization},
year = 2009,
volume = {8},
number = {2},
pages = {85--86},
doi = {http://dx.doi.org/10.1057/palgrave.ivs.2009.7},
publisher = {Palgrave}
}
@InProceedings{DeBoer09WICSA,
author = {Remco de Boer and Patricia Lago and Alexandru Telea and Hans van Vliet},
title = {{Ontology-Driven Visualization of Architectural Design Decisions}},
booktitle = {{Proc. WICSA}},
year = 2009,
publisher = {IEEE},
note = {to appear}
}
@InProceedings{Hoogendorp09VISSOFT,
author = {Hessel Hoogendorp and Ozan Ersoy and Dennie Reniers and Alexandru Telea},
title = {{Extraction and Visualization of Call Dependencies for Large C/C++ Code Bases: A Comparative Study}},
booktitle = {{Proc. VISSOFT}},
year = 2009,
publisher = {IEEE},
note = {to appear}
}
@InProceedings{Sensalire09VISSOFT,
author = {Mariam Sensalire and Patrick Ogao and Alexandru Telea},
title = {{Evaluation of Software Visualization Tools: Lessons Learned}},
booktitle = {{Proc. VISSOFT}},
year = 2009,
publisher = {IEEE},
note = {to appear}
}
@InProceedings{Telea09VISSOFT,
author = {Alexandru Telea and Lucian Voinea},
title = {{Case Study: Visual Analytics in Software Product Assessments}},
booktitle = {{Proc. VISSOFT}},
year = 2009,
publisher = {IEEE},
note = {to appear}
}
@InProceedings{Byelas09ASCI,
author = {Heorhiy Byelas and Alexandru Telea},
title = {{Texture-Based Metrics Visualization on Software Architecture Diagrams}},
booktitle = {{Proc. Advanced School for Computing and Imaging (ASCI'09)}},
iwicategory = {other},
year = 2009
}
@Article{telea09sqm,
author = {Alexandru Telea and Heorhiy Byelas and Lucian Voinea},
title = {{A Framework for Reverse Engineering Large C++ Code Bases}},
journal = {Electronic Notes in Theoretical Computer Science (special issue on Proc. SQM 2008)},
year = 2009,
volume = {233},
pages = {143--159},
doi = {http://dx.doi.org/10.1016/j.entcs.2009.02.066},
publisher = {Springer},
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/SQM08/paper.pdf}
}
@InProceedings{laan09fluid,
author = {van der Laan, Wladimir J. and Simon Green and Miguel Sainz},
title = {{Screen Space Fluid Rendering with Curvature Flow}},
booktitle = {{Proc. I3D 2009: The 2009 ACM SIGGRAPH Symposium on
Interactive 3D Graphics and Games}},
year = 2009,
pages = {91--98},
pdf = {http://www.cs.rug.nl/~roe/publications/fluidcurvature.pdf}
}
@Article{lorist09:_influen_of_mental_fatig_and,
author = {Monicque M. Lorist and Eniko Bezdan and Michael ten Caat
and Mark M. Span and Jos B. T. M. Roerdink and Natasha
M. Maurits},
title = {The influence of mental fatigue and motivation on task
switching; an {EEG} coherence study},
journal = {Brain Research},
volume = 1270,
pages = {95--106},
year = 2009,
pdf = {http://www.cs.rug.nl/~roe/publications/fumapapp-JNM.pdf}
}
@Article{boucard09:_chang_in_cortic_grey_matter,
author = {Christine C. Boucard and Aditya T. Hernowo and R. Paul
Maguire and Nomdo M. Jansonius and Jos B.T.M. Roerdink
and Johanna M.M. Hooymans and Frans W. Cornelissen},
title = {Changes in cortical grey matter density associated with
long-standing retinal visual field defects},
journal = {Brain},
volume = 132,
number = 7,
pages = {1898--1906},
year = 2009
}
@Article{berg09:_crowd_based_model_of_visual_clutt,
author = {Ronald van den Berg and Frans W. Cornelissen and Jos
B. T. M. Roerdink},
title = {A Crowding Model of Visual Clutter},
journal = {J. of Vision},
year = 2009,
volume = 9,
number = 4,
pages = {Article 24, 1--11},
doi = {http://dx.doi.org/10.1167/9.4.24},
issn = {ISSN 1534-7362},
abstract = {Visual information is difficult to search and interpret when the density of the displayed information is high or the layout is chaotic. Visual information that exhibits such properties is generally referred to as being ``cluttered. Clutter should be avoided in information visualizations and interface design in general because it can severely degrade task performance. Although previous studies have identified computable correlates of clutter (such as local feature variance and edge density), understanding of why humans perceive some scenes as being more cluttered than others remains limited. Here, we explore an account of clutter that is inspired by findings from visual perception studies. Specifically, we test the hypothesis that the so-called ``crowding phenomenon is an important constituent of clutter. We constructed an algorithm to predict visual clutter in arbitrary images by estimating the perceptual impairment due to crowding. After verifying that this model can reproduce crowding data we tested whether it can also predict clutter. We found that its predictions correlate well with both subjective clutter assessments and search performance in cluttered scenes. These results suggest that crowding and clutter may indeed be closely related concepts and suggest avenues for further research.}
}
@Article{jalba09:_effic_surfac_recon_from_noisy,
author = {Andrei C. Jalba and Jos B. T. M. Roerdink},
title = {Efficient Surface Reconstruction from Noisy Data using
Regularized Membrane Potentials},
journal = {IEEE Trans. Image Processing},
year = 2009,
volume = 18,
number = 5,
pages = {1119--1134},
month = may,
pdf = {http://www.cs.rug.nl/~roe/publications/recon_tip_final.pdf}
}
@InProceedings{caat09:_data_driven_visual_and_group,
author = {Michael ten Caat and Natasha M. Maurits and Jos
B.T.M. Roerdink},
title = {Data-Driven Visualization and Group Analysis of
Multichannel {EEG} Coherence with Functional Units},
booktitle = {Proc. NeuroMath Workshop, Leuven, March 12-13},
year = 2009,
iwicategory = {other},
note = {Abstract and poster}
}
@InProceedings{crippa09:_enhan_dti_tract_with_adapt,
author = {Alessandro Crippa and Andrei C. Jalba and Jos
B.T.M. Roerdink},
title = {Enhancing {DTI} tractography with adaptive diffusion
tensor interpolation},
booktitle = {Proc. NeuroMath Workshop, Leuven, March 12-13},
year = 2009,
iwicategory = {other},
note = {Abstract and poster}
}
@InProceedings{Preusser:2009:BIRS,
author = {Tobias Preusser and Martin Rumpf and Alexandru Telea},
title = {Flow Visualization via Partial Differential Equations},
booktitle = {Mathematical Foundations of Scientific Visualization, Computer Graphics, and Massive Data Exploration},
pages = {293--312},
publisher = {Springer},
year = {2009},
editor = {Torsten Moller and Bernd Hamann and Robert Russell},
series = {Mathematics and Visualization}
}
@Article{Reniers:2009:CVS,
author = {Dennie Reniers and Alexandru Telea},
title = {Extreme Simplification and Rendering of Point Sets Using Algebraic Multigrid},
journal = {Computing and Visualisation in Science},
year = {2009},
publisher = {Springer},
volume = {12},
number = {1},
pages = {9--23}
}
@InProceedings{Byelas:2009:CSMR,
author = {Heorhiy Byelas and Alexandru Telea},
title = {Visualizing Multivariate Attributes on Software Architectures},
booktitle = {Proc. CSMR (Doctoral Symposium)},
year = {2009},
publisher = {IEEE},
pages = {335--338}
}
@InProceedings{Byelas:2009:PVIS,
author = {Heorhiy Byelas and Alexandru Telea},
title = {Visualizing Metrics on Areas of Interest in Software Architecture Diagrams},
booktitle = {Proc. PacificVis},
year = {2009},
publisher = {IEEE},
pages = {33--40}
}
@InProceedings{Cleveringa:2009:AGI,
author = {Writser Cleveringa and van Veen, Maarten and de Vries, Arnout and de Jong, Arnoud and Tobias Isenberg},
title = {{A}ssisting {G}esture {I}nteraction on {M}ulti-{T}ouch {S}creens},
booktitle = {Proceedings of the CHI 2009 Workshop on Multitouch and Surface Computing (April 4, 2009, Boston, MA, USA)},
editor = {Steve Seow and Dennis Wixon and Scott MacKenzie and Giulio Jocucci and Ann Morrison and Andy Wilson},
year = {2009},
publisher = {ACM Press},
address = {New York},
pdf = {Cleveringa_2009_AGI.pdf},
iwicategory = {other},
abstract = {In this paper we present our ongoing work on multi-user touch interfaces with specific attention to assisting gesture interaction by using gesture previews.},
note = {}
}
% 2008
@article {
Williams:2008:TVCG,
author = {David Williams and S{\"o}ren Grimm and Ernesto Coto and Abdul Roudsari and Haralambos Hatzakis},
title = {Volumetric Curved Planar Reformation for Virtual Endoscopy},
journal = {IEEE Transactions on Visualization and Computer Graphics},
year = {2008},
volume = 14,
number = 1,
pages = {109--119},
}
@PhdThesis{caat01:_multic_eeg_visual,
author = {M. ten Caat},
title = {Multichannel {EEG} Visualization},
school = {Institute of Mathematics and Computing Science},
year = 2008,
month = {February 1},
address = {University of Groningen, The Netherlands}
}
@Article{blom:_prosec_dna,
author = {Evert-Jan Blom and R. Breitling and K. J. Hofstede and
J. B. T. M. Roerdink and S. A. F. T. van Hijum and
O. P. Kuipers},
title = {Prosecutor: parameter-free inference of gene function for
prokaryotes using {DNA} microarray data, genomic context
and multiple gene annotation sources},
journal = {BMC Genomics},
year = 2008,
volume = 9,
pages = 495
}
@Article{blom:_discl,
author = {Evert-Jan Blom and Sacha A. F. T. van Hijum and Klaas
J. Hofstede and Remko Silvis and Jos B. T. M. Roerdink and
Oscar P. Kuipers},
title = {{DISCLOSE}: {DIS}section of {CL}usters {O}btained by
{SE}ries of transcriptome data using functional
annotations and putative transcription factor binding
sites},
journal = {BMC Bioinformatics},
year = 2008,
volume = 9,
pages = 535
}
@InProceedings{Reniers:2008:SMI,
author = {Dennie Reniers and Alexandru Telea},
title = {Robust segmentation of voxel shapes using medial surfaces},
booktitle = {Proc. Shape Modeling and Applications (SMI)},
year = {2008},
publisher = {IEEE},
note = {poster},
pages = {273--274},
iwicategory = {other},
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/SMI08/poster.pdf}
}
@Article{hesselink:2008:euclid,
author = {Wim H. Hesselink and Jos B. T. M. Roerdink},
title = {Euclidean skeletons of digital image and volume data in
linear time by the integer medial axis transform},
journal = {IEEE Trans. Pattern Analysis and Machine Intell.},
year = 2008,
volume = 30,
number = 12,
pages = {2204--2217},
month = dec,
pdf = {http://www.cs.rug.nl/~roe/publications/ima-pami.pdf}
}
@Article{telea:2008:sacj,
author = {A. Telea and H. Byelas and L. Voinea},
title = {Architecting an Open System for Querying Large C and C++ Code Bases},
journal = {S. African Computer Journal},
year = 2008,
volume = {41},
month = dec,
pages = {43--56},
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/SACJ/paper.pdf},
publisher = {SA Publications Ltd}
}
@Article{Byelas:2008:i3,
author = {H. Byelas and A. Telea},
title = {Visual Software Analytics for Assessing the Maintainability of Object-Oriented Software Systems},
journal = {J. of Information, Interaction and Intelligence},
year = 2008,
volume = {8},
number = {1},
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/I3/paper.pdf}
}
@InProceedings{telea:2008:benevol,
year = 2008,
title = {Visual Analytics for Understanding the Evolution of Large Software Projects},
author = {A. Telea and L. Voinea},
booktitle = {Proc. BENEVOL},
publisher = {Univ. of Eindhoven, the Netherlands},
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/BENEVOL08/paper.pdf}
}
@Article{Byelas:2008:JVLC,
author = {Heorhiy Byelas and Alexandru Telea},
title = {Towards Visual Realism in Drawing Areas of Interest on
Software Architecture Diagrams},
journal = {J. of Visual Languages and Computing},
year = {2008},
volume = {20},
number = {2},
publisher = {Elsevier},
pages = {110--128}
}
@InProceedings{Vlaming:2008:PTI,
author = {Luc Vlaming and Jasper Smit and Tobias Isenberg},
title = {{P}resenting using {T}wo-{H}anded {I}nteraction in {O}pen
{S}pace},
booktitle = {Proceedings of the 3\textsuperscript{rd} IEEE Tabletop
Workshop (Tabletop 2008, October 1--3, 2008, Amsterdam,
The Netherlands)},
editor = {Sriram Subramaniam and Shahram Izadi},
OPTseries = {},
year = {2008},
publisher = {IEEE Computer Society},
address = {Los Alamitos},
pages = {31--34},
doi = {http://doi.ieeecomputersociety.org/10.1109/TABLETOP.2008.4660180},
url = {http://tobias.isenberg.cc/VideosAndDemos/Vlaming2008PTI},
video = {http://www.youtube.com/watch?v=f75GMH4gyu0},
pdf = {Vlaming_2008_PTI.pdf},
abstract = {Based on recent demonstrations of low-cost, infrared-based
point tracking, we explore two-handed, surface-less
interaction for presentation. On both hands, thumb and
index finger are equipped with retro-reflective markers
which are tracked by a Wiimote. We contribute a robust
finger pairing and pinch recognition method that allows us
to discriminate the hands and to initiate actions. We
apply this input to a presentation application that allows
users to work with slide decks, images, and videos. We
identify specific requirements of this application domain
and discuss the implemented transformation interactions
and widgets. We report on user experience in both casual
use and an actual presentation as well as discuss
advantages and limitations.}
}
@InProceedings{Isenberg:2008:MST,
author = {Tobias Isenberg and Simon Nix and Martin Schwarz and
Andr{\'e} Miede and Stacey D. Scott and Sheelagh
Carpendale},
title = {{M}obile {S}patial {T}ools for {F}luid {I}nteraction},
booktitle = {Posters of the 3\textsuperscript{rd} IEEE Tabletop
Workshop (Tabletop 2008, October 1--3, 2008, Amsterdam,
The Netherlands)},
editor = {Sriram Subramaniam and Shahram Izadi},
year = {2008},
publisher = {IEEE Computer Society},
address = {Los Alamitos},
video = {http://tobias.isenberg.cc/personal/videos/Isenberg_2008_MST.avi},
url = {http://tobias.isenberg.cc/VideosAndDemos/Isenberg2008MST},
pdf = {Isenberg_2008_MST.pdf},
note = {Extended abstract and poster},
abstract = {Fluid, spatially-aware interaction techniques are
increasingly recognized as important for large interactive
displays. Our interaction buffer framework (i-buffers)
unites the development of fluid, mobile spatial tools by
supporting specification of interface object properties
spatially rather than temporally. I-buffers provide
control of multiple objects simultaneously by using
high-level, task-driven actions without the need for
setting low-level properties of objects. We present
i-buffers as an efficient, unified approach for
implementing spatial interaction, even with large amounts
of multi-user tabletop content, and illustrate this with a
selection of tools applied in fluid interaction
scenarios.},
iwicategory = {other}
}
@InProceedings{reniers08:vcbm,
year = 2008,
title = {Robust Classification and Analysis of Anatomical Surfaces
Using 3D Skeletons},
author = {Dennie Reniers and Andrei Jalba and Alexandru Telea},
booktitle = {Proc. VCBM},
publisher = {Eurographics},
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/VCBM08/paper.pdf}
}
@InProceedings{byelas08:wcre,
year = 2008,
title = {The Metric Lens: Visualizing Metrics and Structure on
Software Diagrams},
author = {Heorhyi Byelas and Alexandru Telea},
booktitle = {Proc. WCRE (tool demo paper)},
publisher = {IEEE Press},
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/WCRE08/paper.pdf}
}
@Proceedings{telea08:softvis,
year = 2008,
title = {Proceedings of the 4th International Symposium on Software
Visualization (SOFTVIS'08)},
editor = {Rainer Koschke and Alexandru Telea and Christopher
Hundhausen},
author = {Rainer Koschke and Alexandru Telea and Christopher
Hundhausen},
volume = {4},
series = {ACM SIGSOFT},
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/SoftVis08/frontmatter.pdf}
}
@Proceedings{telea08:eurovis,
year = 2008,
title = {Proceedings of the 10th Eurographics/IEEE Symposium on
Data Visualization (EuroVis'08)},
editor = {Anna Vilanova and Alexandru Telea and Gerik Scheuermann
and Torsten Moller},
author = {Anna Vilanova and Alexandru Telea and Gerik Scheuermann
and Torsten Moller},
series = {Computer Graphics Forum},
volume = {27},
number = {3}
}
@InProceedings{telea08:aoe,
author = {Heorhiy Byelas and Alexandru Telea},
title = {Texture-Based Visualization of Metrics on Software
Architectures},
booktitle = {Proc. ACM SOFTVIS'08},
year = 2008,
note = {Poster},
iwicategory = {other},
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/SoftVis08/poster.pdf}
}
@InProceedings{telea08:classifying,
author = {Mariam Sensalire and Patrick Ogao and Alexandru Telea},
title = {Classifying Desirable Features of Software Visualization
Tools for Corrective Maintenance},
booktitle = {Proc. ACM SOFTVIS'08},
year = 2008,
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/SoftVis08/paper2.pdf}
}
@InProceedings{telea08:solidfx,
author = {Alexandru Telea and Lucian Voinea},
title = {An Interactive Reverse-Engineering Environment for
Large-Scale C++ Code},
booktitle = {Proc. ACM SOFTVIS'08},
year = 2008,
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/SoftVis08/paper.pdf}
}
@Article{telea08:pg_part,
author = {Dennie Reniers and Alexandru Telea},
title = {Part-type Segmentation of Articulated Voxel-Shapes using
the Junction Rule},
journal = {Computer Graphics Forum (Proc. Pacific Graphics'08)},
volume = {27},
number = {7},
pages = {1845--1852},
year = 2008,
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/PG08/part.pdf}
}
@Article{telea08:pg_patch,
author = {Dennie Reniers and Alexandru Telea},
title = {Patch-type Segmentation of Voxel Shapes using Simplified
Surface Skeletons},
journal = {Computer Graphics Forum (Proc. Pacific Graphics'08)},
volume = {27},
number = {7},
pages = {1837--1844},
year = 2008,
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/PG08/patch.pdf}
}
@Article{telea08:visual_computer,
author = {Dennie Reniers and Alexandru Telea},
title = {Hierarchical Part-Type Segmentation using Voxel-Based
Curve Skeletons},
volume = {24},
number = {6},
pages = {383--395},
journal = {The Visual Computer},
year = 2008,
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/VIS_COMPUTER08/paper.pdf}
}
@InProceedings{telea08:csmr_solidba,
author = {Lucian Voinea and Alexandru Telea},
title = {A Tool for Optimizing the Build Performance of Large
Software Code Bases},
booktitle = {Proc. CSMR},
pages = {355--357},
year = 2008,
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/CSMR08/paper2.pdf}
}
@InProceedings{telea08:csmr_solidfx,
author = {Lucian Voinea and Alexandru Telea},
title = {{SolidFX}: An Interactive Reverse Engineering Environment
for {C++}},
booktitle = {Proc. CSMR},
pages = {358--360},
year = 2008,
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/CSMR08/paper1.pdf}
}
@InProceedings{telea08:ssss,
author = {Dennie Reniers and Alexandru Telea},
title = {Segmented Simplified Surface Skeletons},
booktitle = {Proc. Intl. Conf. on Discrete Geometry for Computer
Imagery (DGCI)},
pages = {262--274},
year = 2008,
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/DGCI08/paper1.pdf}
}
@Article{telea08:tvcg,
author = {Dennie Reniers and Jarke J. van Wijk and Alexandru Telea},
title = {Computing Multiscale Curve and Surface Skeletons of Genus 0 Shapes using a
Global Importance Measure},
journal = {IEEE TVCG},
year = 2008,
volume = 14,
number = 2,
pages = {355--368},
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/TVCG07/paper.pdf},
}
@Article{caat08:_high_densit_eeg_coher_analy,
author = {Michael ten Caat and Monicque M. Lorist and Eniko Bezdan
and Jos B. T. M. Roerdink and Natasha M. Maurits},
title = {High-Density EEG Coherence Analysis Using Functional Units
Applied to Mental Fatigue},
journal = {J. Neuroscience Methods},
volume = 171,
number = 2,
pages = {271--278},
year = 2008,
note = {http://dx.doi.org/10.1016/j.jneumeth.2008.03.022},
pdf = {http://www.cs.rug.nl/~roe/publications/JNEUMETH-NSM4872.pdf}
}
@Article{caat08:_data_driven_visual_group_analy,
author = {Michael ten Caat and Natasha M. Maurits and Jos
B. T. M. Roerdink},
title = {Data-Driven Visualization and Group Analysis of
Multichannel EEG Coherence with Functional Units},
journal = {IEEE Trans. Visualization and Computer Graphics},
year = 2008,
volume = 14,
number = 4,
year = 2008,
pages = {756--771},
pdf = {http://www.cs.rug.nl/~roe/publications/fumaptvcg_final.pdf}
}
@Article{wink08:_data_fourier,
author = {Wink, Alle~Meije and Hans Hoogduin and Jos
B. T. M. Roerdink},
title = {Data-driven haemodynamic response function extraction
using {Fourier-wavelet} regularised deconvolution},
journal = {BMC Medical Imaging},
year = 2008,
volume = {8:7},
doi = {http://dx.doi.org/10.1186/1471-2342-8-7},
url = {http://www.biomedcentral.com/1471-2342/8/7}
}
@InProceedings{Meraj:2008:MHD,
author = {Zainab Meraj and Brian Wyvill and Tobias Isenberg and Amy
Gooch and Richard Guy},
title = {{M}imicking {H}and-{D}rawn {P}encil {L}ines},
booktitle = {Proceedings of the International Symposium on
Computational Aesthetics in Graphics, Visualization, and
Imaging (CAe 2008, June 18--20, 2008, Lisbon, Portugal)},
editor = {Paul Brown and Douglas W. Cunningham and Victoria
Interrante and Jon McCormack},
year = {2008},
publisher = {Eurographics Association},
address = {Aire-la-Ville, Switzerland},
pages = {73--80},
doi = {http://dx.doi.org/10.2312/COMPAESTH/COMPAESTH08/073-080},
url = {http://tobias.isenberg.cc/VideosAndDemos/Meraj2008MHD},
pdf = {Meraj_2008_MHD.pdf},
note = {\textbf{Selected as one of the best papers of CAe 2008}},
abstract = {In applications such as architecture, early design
sketches often mislead the target audience
[SSRL96]. Approximate human-drawn sketches are typically
accepted as a better way of demonstrating fundamental
design concepts. To this end we have designed an algorithm
that creates lines that perceptually resemble human-drawn
lines. Our algorithm works directly with input point data
and physically based mathematical model of human arm
movement. Further, the algorithm does not rely on a
database of human drawn lines, nor does it require any
input other than the end points of the lines to generate a
line of arbitrary length. The algorithm will generate any
number of aesthetically pleasing and natural looking
lines, where each one is unique. The algorithm was
designed by conducting various user studies on human line
sketches, and analyzing the lines to produce basic
heuristics. We found that an observational analysis of
human lines made a bigger impact on the algorithm than a
statistical analysis. A further study has shown that the
algorithm produces lines that are perceptually
indistinguishable from straight hand-drawn pencil lines.}
}
@InProceedings{telea08:asci_aoi,
author = {Heorhiy Byelas and Alexandru Telea},
title = {Evaluating Visual Realism in Drawing Areas of Interest on
UML Diagrams},
booktitle = {Proc. of the 14th Annual Conference of the Advanced School
for Computing and Imaging (ASCI'08, June 11--13, Het
Heijderbos, Heijen, The Netherlands)},
pages = {265--272},
year = 2008,
iwicategory = {other},
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/ASCI08/paper.pdf}
}
@InProceedings{Everts:2008:GAf,
author = {Maarten H. Everts and Henk Bekker and Jos B.T.M. Roerdink},
title = {Graph Algorithms for Fast Preview of Global Brain White Matter Structure},
booktitle = {SIREN: Scientific ICT Research Event Netherlands, 29
September 2008, VU Amsterdam},
year = 2008,
note = {Poster},
pdf = {Everts_2008_GAf.pdf},
iwicategory = {other}
}
@InProceedings{Isenberg:2008:HAI,
author = {Tobias Isenberg and Jens Grubert and Maarten H. Everts and
Sheelagh Carpendale},
title = {{H}ands-{O}n {A}nalysis and {I}llustration: {I}nteractive
{E}xploratory {V}isualization of {V}ector {F}ields},
booktitle = {Proceedings of the Fourteenth Annual Conference of the
Advanced School for Computing and Imaging (ASCI CONFERENCE
2008, June 11--13, 2008, Het Heijderbos, Heijen, The
Netherlands)},
year = {2008},
pages = {222--229},
iwicategory = {other},
url = {http://tobias.isenberg.cc/VideosAndDemos/Isenberg2008IEV},
pdf = {Isenberg_2008_HAI.pdf},
video = {http://www.youtube.com/watch?v=yHX2__wnUJg},
abstract = {We present techniques to interactively explore
representations of 2D vector fields. Through a set of
simple hand postures used on large, touch-sensitive
displays, our approach allows individuals to custom-design
glyphs (arrows, lines, etc.) that best reveal patterns of
the underlying dataset. Interactive exploration of vector
fields is facilitated through freedom of glyph placement,
glyph density control, and animation. The custom glyphs
can be applied individually to probe specific areas of the
data but can also be applied in groups to explore larger
regions of a vector field. Repositionable sources from
which glyphs---animated according to the local vector
field---continue to emerge are used to examine the vector
field dynamically. The combination of these techniques
results in an engaging visualization with which the user
can rapidly explore and analyze varying types of 2D vector
fields, using a virtually infinite number of
custom-designed glyphs.}
}
@InProceedings{Meraj:2008:MHP,
author = {Zainab Meraj and Brian Wyvill and Tobias Isenberg and Amy
Gooch and Richard Guy},
title = {{M}imicking {H}and-{D}rawn {P}encil {L}ines},
booktitle = {Poster and Animation Proceedings of the Sixth
International Symposium on Non-Photorealistic Animation
and Rendering (NPAR 2008, June 9--11, 2008, Annecy,
France)},
editor = {Ken Anjyo and Pascal Barla},
year = {2008},
pages = {9},
url = {http://tobias.isenberg.cc/VideosAndDemos/Meraj2008MHD},
pdf = {Meraj_2008_MHP.pdf},
abstract = {Our research capture the essence of a single stroke drawn
by humans as straight pencil lines of arbitrary length,
and encode it into an algorithm to generate strokes. This
algorithm can produce a line that resembles a human-drawn
line, and use it to replace traditional computer-drawn
lines (e.g., [Bresenham 1965]). We divide our algorithm
for generating a human-like drawn line into two parts: (a)
synthesizing the path that corresponds to human arm
movement and (b) synthesizing the pencil texture applied
along the path. We are inspired by the textures produced
by real pencils, similar to the work by Sousa and Buchanan
[2000], by texture synthesis methods like the one by
Gagalowicz and Ma [1985], and a mathematical model for arm
trajectory by Flash and Hogan [1985]. Our contribution,
thus, is a high quality pencil media line reproduction
agent for creating aesthetically pleasing lines that mimic
human-drawn lines.},
iwicategory = {other}
}
@Article{telea08:codeflows,
author = {Alexandru Telea and David Auber},
title = {CodeFlows: Visualizing Structural Evolution of Source
Code},
journal = {Computer Graphics Forum (Proc. EuroVis'08)},
volume = 27,
number = 3,
pages = {271--278},
year = 2008,
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/EuroVis08/paper.pdf}
}
@Article{Westenberg:2008:VGE,
author = {Michel A. Westenberg and Sacha A. F. T. van Hijum and
Oscar P. Kuipers and Jos B. T. M. Roerdink},
title = {Visualizing Genome Expression and Regulatory Network
Dynamics in Genomic and Metabolic Context},
journal = {Computer Graphics Forum},
pdf = {Westenberg_2008_VGE.pdf},
year = 2008,
volume = 27,
number = 3,
pages = {887--894},
doi = {http://dx.doi.org/10.1111/j.1467-8659.2008.01221.x}
}
@Article{Isenberg:2008:IEV,
author = {Tobias Isenberg and Maarten H. Everts and Jens Grubert and
Sheelagh Carpendale},
title = {{I}nteractive {E}xploratory {V}isualization of {2D}
{V}ector {F}ields},
journal = {Computer Graphics Forum},
year = {2008},
volume = {27},
number = {3},
month = may,
pages = {983--990},
doi = {http://dx.doi.org/10.1111/j.1467-8659.2008.01233.x},
url = {http://tobias.isenberg.cc/VideosAndDemos/Isenberg2008IEV},
pdf = {Isenberg_2008_IEV.pdf},
video = {http://www.youtube.com/watch?v=yHX2__wnUJg},
abstract = {In this paper we present several techniques to
interactively explore representations of 2D vector
fields. Through a set of simple hand postures used on
large, touch-sensitive displays, our approach allows
individuals to custom-design glyphs (arrows, lines, etc.)
that best reveal patterns of the underlying
dataset. Interactive exploration of vector fields is
facilitated through freedom of glyph placement, glyph
density control, and animation. The custom glyphs can be
applied individually to probe specific areas of the data
but can also be applied in groups to explore larger
regions of a vector field. Re-positionable sources from
which glyphs---animated according to the local vector
field---continue to emerge are used to examine the vector
field dynamically. The combination of these techniques
results in an engaging visualization with which the user
can rapidly explore and analyze varying types of 2D vector
fields, using a virtually infinite number of
custom-designed glyphs.}
}
@InProceedings{Grubert:2008:ISN,
author = {Jens Grubert and Sheelagh Carpendale and Tobias Isenberg},
title = {{I}nteractive {S}troke-{B}ased {NPR} using {H}and
{P}ostures on {L}arge {D}isplays},
booktitle = {Short Papers at Eurographics 2008 (EG~2008, April 14--18,
2008, Crete, Greece)},
editor = {Katerina Mania and Erik Reinhard},
year = {2008},
publisher = {Eurographics Association},
address = {Aire-la-Ville, Switzerland},
pages = {279--282},
OPTdoi = {http://www.eg.org/EG/DL/conf/EG2008/short/095-098.pdf.abstract.pdf;internal&action=paperabstract.action},
url = {http://tobias.isenberg.cc/VideosAndDemos/Grubert2008ISN},
url2 = {http://innovis.cpsc.ucalgary.ca/Research/InteractiveCanvas},
pdf = {Grubert_2008_ISN.pdf},
video = {http://www.youtube.com/watch?v=1BAu0BfuMZ4},
note = {Short paper and poster},
abstract = {We explore the use of hand postures to interact with
stroke-based rendering (SBR) on touch-sensitive large
displays. In contrast to traditional WIMP interfaces, we
allow people to directly engage with and influence a
rendering. Our system allows the creation of new stroke
primitives as well as provides mechanisms to distribute
and then manipulate them on the canvas. We offer a set of
natural mappings from hand postures to rendering
parameterizations. The resulting system allows an
intuitive exploration of SBR without the need for
traditional desktop interfaces.},
iwicategory = {other}
}
@Article{Maciejewski:2008:MSA,
author = {Ross Maciejewski and Tobias Isenberg and William
M. Andrews and David S. Ebert and Mario Costa Sousa and
Wei Chen},
title = {{M}easuring {S}tipple {A}esthetics in {H}and-{D}rawn and
{C}omputer-{G}enerated {I}mages},
journal = {Computer Graphics \& Applications},
year = {2008},
volume = {28},
number = {2},
month = mar # {/} # apr,
pages = {62--74},
doi = {http://doi.ieeecomputersociety.org/10.1109/MCG.2008.35},
url = {http://dx.doi.org/10.1109/MCG.2008.35},
pdf = {Maciejewski_2008_MSA.pdf},
abstract = {When people compare a computer-generated illustration to a
hand-drawn illustration of the same object, they usually
perceive differences. This seems to indicate that the two
kinds of images follow different aesthetic principles. To
explore and explain these differences, the authors compare
texture stippling in hand-drawn and computer-generated
illustrations, using image processing analysis
techniques.}
}
@InProceedings{telea08:visapp,
author = {Dennie Reniers and Alexandru Telea},
title = {Tolerance-based Feature Transforms},
booktitle = {Advances in Computer Graphics and Computer Vision
(Intl. Confs. VISAPP and GRAPP, Setubal, Portugal,
Feb. 25-28, 2006, Revised Selected Papers)},
year = 2008,
pages = {107--114},
volume = 4,
publisher = {Springer LNCS},
url = {http://www.win.tue.nl/~alext/ALEX/PAPERS/CGVTA07/chapter.pdf},
}
@TechReport{Hinrichs:2008:BTE,
author = {Uta Hinrichs and Holly Schmidt and Tobias Isenberg and
Mark S. Hancock and Sheelagh Carpendale},
title = {{B}ubble{T}ype: {E}nabling {T}ext {E}ntry within a
{W}alk-{U}p {T}abletop {I}nstallation},
institution = {Department of Computer Science, University of Calgary},
year = {2008},
number = {2008-893-06},
address = {Canada},
month = feb,
doi = {http://dx.doi.org/1880/46334},
pdf = {Hinrichs_2008_BTE.pdf},
abstract = {We address the issue of enabling text entry for
walk-up-and-use interactive tabletop displays located in
public spaces. Public tabletop installations are
characterized by a diverse target user group, multi-person
interaction, and the need for high approachability and
intuitiveness. We first define the design constraints of
text-entry methods for public tabletop installations such
as clear affordances, audience expertise, support of
direct-touch interaction, visual appearance, space
requirements, multi-user support, and technical
simplicity. We then describe an iterative design process
that was informed by these constraints and led to the
development of two stylus keyboard
prototypes---BubbleQWERTY and BubbleCIRCLE---for use in
interactive public tabletop installations.}
}
@Book{Telea:2008:DVP,
author = {Alexandru C. Telea},
title = {Data Visualization: Principles and Practice},
year = {2008},
publisher = {A~K~Peters, Ltd.},
address = {Wellesley, MA, USA},
url = {http://www.akpeters.com/product.asp?ProdCode=3066},
abstract = {The goal of data visualization is to use images to improve
our understanding of a dataset, drawing on techniques from
mathematics, computer science, cognitive and perception
science, and physics. In this introductory text, the
author provides a compact introduction to the field that
allows readers to learn about visualization
techniques. The material focuses on those techniques and
methods that have a broad applicability in visualization
applications, occur in most practical problems in various
guises, and do not demand a specialized background to be
understood. However, the author has also included a number
of less mainstream visualization techniques. With these
methods, the book gives the reader an idea of the large
variety of applications of data visualizations,
illustrates the wide range of problems that can be tackled
by such methods, and emphasizes the strong connections
between visualization and related disciplines such as
imaging and computer graphics.}
}
@Article{VanDenBerg:2008:ACMTAP,
author = {Ronald van den Berg and Frans W. Cornelissen and Jos
B. T. M. Roerdink},
title = {Perceptual Dependencies in Information Visualization
Assessed by Complex Visual Search},
journal = {ACM Transactions on Applied Perception},
volume = {4},
number = {4},
year = {2008},
issn = {1544-3558},
pages = {1--21},
pdf = {VanDenBerg_2007_ACMTAP.pdf},
doi = {http://doi.acm.org/10.1145/1278760.1278763},
publisher = {ACM},
address = {New York, NY, USA},
abstract = {A common approach for visualizing data sets is to map them
to images in which distinct data dimensions are mapped to
distinct visual features, such as color, size and
orientation. Here, we consider visualizations in which
different data dimensions should receive equal weight and
attention. Many of the end-user tasks performed on these
images involve a form of visual search. Often, it is
simply assumed that features can be judged independently
of each other in such tasks. However, there is evidence
for perceptual dependencies when simultaneously presenting
multiple features. Such dependencies could potentially
affect information visualizations that contain
combinations of features for encoding information and,
thereby, bias subjects into unequally weighting the
relevance of different data dimensions. We experimentally
assess (1) the presence of judgment dependencies in a
visualization task (searching for a target node in a
node-link diagram) and (2) how feature contrast relates to
salience. From a visualization point of view, our most
relevant findings are that (a) to equalize saliency (and
thus bottom-up weighting) of size and color, color
contrasts have to become very low. Moreover, orientation
is less suitable for representing information that
consists of a large range of data values, because it does
not show a clear relationship between contrast and
salience; (b) color and size are features that can be used
independently to represent information, at least as far as
the range of colors that were used in our study are
concerned; (c) the concept of (static) feature salience
hierarchies is wrong; how salient a feature is compared to
another is not fixed, but a function of feature contrasts;
(d) final decisions appear to be as good an indicator of
perceptual performance as indicators based on measures
obtained from individual fixations. Eye tracking,
therefore, does not necessarily present a benefit for user
studies that aim at evaluating performance in search
tasks.}
}
@InProceedings{Ferdosi:2008:VAD,
author = {B.J. Ferdosi and H. Buddelmeijer and A. Helmi and S.C. Trager and E.A. Valentijn and M.H.F. Wilkinson and J.M. van der Hulst and J.B.T.M. Roerdink},
title = {Visualizing Astronomical Data},
booktitle = {SIREN: Scientific ICT Research Event Netherlands, September 29, 2008 , VU University Amsterdam},
year = 2008,
note = {Poster},
pdf = {Ferdosi_2008_VAD.pdf},
iwicategory = {other},
abstract = {Enormous size and dimensionality of astronomical data pose a chal-
lenge in exploration, analyzing and understanding them. We survey often used astronomical visualization software. We summarize their strengths and weaknesses and try to determine where they can be improved.} }
% 2007
@phdthesis { WilliamsD:vcpr, author={David Williams}, title={Visualisation of Curved Tubular Structures in Medical Datasets : An Application to Virtual Colonoscopy}, school={City University, London}, year={2007} }
@article { Coto:2007:CG, author = {Ernesto Coto and S{\"o}ren Grimm and David Williams}, title = {O-Buffer Based IFT Watershed from Markers for Large Medical Datasets}, journal = {Computer and Graphics}, year = {2007}, volume = 31, number = 6, pages = {848--863} }
@inproceedings { Williams:2007:CARS, author = {David Williams and S{\"o}ren Grimm and Ernesto Coto and Abdul Roudsari and Haralambos Hatzakis}, title = {Volumetric CPR as an Enhancement to Virtual Colonoscopy Systems}, booktitle = {Computer Aided Radiology and Surgery}, year = {2007} }
@PhdThesis{plantinga07:_certif_algor_for_implic_surfac,
author = {S. Plantinga},
title = {Certified Algorithms for Implicit Surfaces},
school = {Institute of Mathematics and Computing Science},
year = 2007,
month = {February 16},
address = {University of Groningen, The Netherlands}
}
@Article{caat07:_desig_evaluat_tiled_paral_coord,
author = {Michael ten Caat and Natasha M. Maurits and Jos
B. T. M. Roerdink},
title = {Design and Evaluation of Tiled Parallel Coordinate
Visualization of Multichannel {EEG} Data},
journal = {IEEE Trans.\ Visualization and Computer Graphics},
volume = 13,
number = 1,
year = 2007,
issn = {1077--2626},
pages = {70--79},
pdf = {http://www.cs.rug.nl/~roe/publications/designevaltpctwocol.pdf},
doi = {http://doi.ieeecomputersociety.org/10.1109/TVCG.2007.9},
publisher = {IEEE Computer Society},
address = {Los Alamitos}
}
@Article{blom07:_fiva,
author = {Evert-Jan Blom and Dinne W. J. Bosman and Sacha
A. F. T. van Hijum and Rainer Breitling and Lars Tijsma
and Remko Silvis and Jos B. T. M. Roerdink and Oscar
P. Kuipers},
title = {{FIVA}: Functional Information Viewer and Analyzer
extracting biological knowledge from transcriptome data of
prokaryotes},
journal = {Bioinformatics},
volume = 23,
number = 9,
pages = {1161--1163},
year = 2007,
doi = {http://dx.doi.org/10.1093/bioinformatics/btl658},
url = {http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btl658v1}
}
@Article{urbach07:_connec_shape_size_patter_spect,
author = {Erik R. Urbach and Jos B. T. M. Roerdink and Michael
H. F. Wilkinson},
title = {Connected Shape-Size Pattern Spectra for Rotation and
Scale-Invariant Classification of Gray-Scale Images},
journal = {IEEE Transactions on Pattern Analysis and Machine
Intelligence},
volume = 29,
number = 2,
year = 2007,
issn = {0162-8828},
pages = {272--285},
doi = {http://doi.ieeecomputersociety.org/10.1109/TPAMI.2007.28},
publisher = {IEEE Computer Society},
address = {Los Alamitos, CA, USA},
pdf = {http://www.cs.rug.nl/~roe/publications/pamiconnmvps.pdf}
}
@Article{urbach07:_connec,
author = {E.R. Urbach and J.B.T.M. Roerdink and M.H.F. Wilkinson},
title = {Connected morphological operators improve image
classification},
journal = {SPIE Newsroom},
year = 2007,
note = {http://dx.doi.org/10.1117/2.1200706.0699},
url = {http://spie.org/x14554.xml}
}
@Article{jalba07:_effic_coulom,
author = {Andrei C. Jalba and Jos B. T. M. Roerdink},
title = {Efficient surface reconstruction using generalized Coulomb
potentials},
journal = {IEEE Trans.\ Visualization and Computer Graphics},
volume = 13,
number = 6,
year = 2007,
pages = {1512--1519},
pdf = {http://www.cs.rug.nl/~roe/publications/recon_ada_tvcg.pdf}
}
@TechReport{Grubert:2007:ISN,
author = {Jens Grubert and Sheelagh Carpendale and Tobias Isenberg},
title = {{I}nteractive {S}troke-{B}ased {NPR} using {H}and
{P}ostures on {L}arge {D}isplays},
institution = {Department of Computer Science, University of Calgary},
year = {2007},
number = {2007-883-35},
address = {Canada},
month = dec,
doi = {http://dx.doi.org/1880/45787},
url = {http://tobias.isenberg.cc/VideosAndDemos/Grubert2008ISN},
url2 =
{http://innovis.cpsc.ucalgary.ca/Research/InteractiveCanvas},
pdf = {Grubert_2007_ISN.pdf},
video = {http://www.youtube.com/watch?v=1BAu0BfuMZ4},
abstract = {We explore the use of hand postures to interact with
stroke-based rendering (SBR) on touch-sensitive large
displays. In contrast to traditional WIMP interfaces, we
allow people to directly engage with and influence a
rendering. Our system allows the creation of new stroke
primitives as well as provides mechanisms to distribute
and then manipulate them on the canvas. We offer a set of
natural mappings from hand postures to rendering
parameterizations. The resulting system allows an
intuitive exploration of SBR without the need for
traditional desktop interfaces.}
}
@inproceedings{VanDerLaan:2007:asci,
author = {W.J. van der Laan and A.C. Jalba, and J.B.T.M. Roerdink},
title = {Multiresolution {MIP} rendering of large volumetric data
accelerated on graphics hardware},
booktitle = {13th Ann. Conf. Advanced School for Computing and Imaging
(ASCI'07)},
year = {2007},
pages = {59--66},
iwicategory = {other}
}
@Article{Westenberg:2007:VAF,
author = {Michel A. Westenberg and Jos B. T. M. Roerdink and Michael
H. F. Wilkinson},
title = {Volumetric attribute filtering and interactive
visualization using the {Max-Tree} representation},
journal = {IEEE Transactions on Image Processing},
pdf = {Westenberg_2007_VAF.pdf},
year = 2007,
volume = 16,
number = 2,
pages = {2943--2952}
}
@Misc{Westenberg:2007:VIB,
author = {Michel A. Westenberg},
title = {Visualisatie in de bioinformatica},
year = 2007,
note = {watisgenomics.nl - public information about genomics
research, technology and societal aspects},
url = {http://www.watisgenomics.nl/genomics/genomics/i001318.html}
}
@TechReport{Grubert:2007:ISB,
author = {Jens Grubert and Mark Hanckock and Sheelagh Carpendale and
Edward Tse and Tobias Isenberg},
title = {{I}nteracting with {S}troke-{B}ased {R}endering on a
{W}all {D}isplay},
institution = {Department of Computer Science, University of Calgary},
year = {2007},
number = {2007-882-34},
address = {Canada},
month = oct,
doi = {http://dx.doi.org/1880/45786},
url2 = {http://innovis.cpsc.ucalgary.ca/Research/InteractiveCanvas},
pdf = {Grubert_2007_ISB.pdf},
video = {http://tobias.isenberg.cc/personal/videos/Grubert_2008_ISB.mp4},
abstract = {We introduce two new interaction techniques for creating
and interacting with non-photorealistic images using
stroke-based rendering. We provide bimanual control of a
large interactive canvas through both remote pointing and
direct touch. Remote pointing allows people to sit and
interact at a distance with an overview of the entire
display, while direct-touch interaction provides more
precise control. We performed a user study to compare
these two techniques in both a controlled setting with
constrained tasks and an exploratory setting where
participants created their own painting. We found that,
although the direct-touch interaction outperformed remote
pointing, participants had mixed preferences and did not
consistently choose one or the other to create their own
painting. Some participants also chose to switch between
techniques to achieve different levels of precision and
control for different tasks.}
}
@InProceedings{Westenberg:2007:GIV,
author = {Michel A. Westenberg and Sacha A. F. T. van Hijum and
Andrzej T. Lulko and Oscar P. Kuipers and Jos
B. T. M. Roerdink},
title = {{GENeVis}: Interactive Visualization of Gene Regulatory
Networks},
booktitle = {Benelux Bioinformatics Conference (BBC 2007), Leuven,
Belgium, November 12--13},
year = 2007,
note = {Poster},
iwicategory = {other}
}
@InProceedings{Westenberg:2007:GIa,
author = {Michel A. Westenberg and Jos B. T. M. Roerdink and Sacha
A. F. T. van Hijum and Andrzej T. Lulko and Oscar
P. Kuipers},
title = {GENeVis: Interactive Visualization of Gene Regulatory
Networks},
booktitle = {SIREN: Scientific ICT Research Event Netherlands, 30
October 2007, TU Delft},
year = 2007,
note = {Poster},
iwicategory = {other}
}
@InProceedings{byelas07:siren,
author = {Heorhiy Byelas and Alexandru Telea},
title = {Visualization of Quality Attributes on Software
Architectures},
booktitle = {SIREN: Scientific ICT Research Event Netherlands, 30
October 2007, TU Delft},
year = {2007},
note = {Poster},
iwicategory = {other}
}
@inproceedings{VanDerLaan:2007:multimip,
author = {W.J. van der Laan and A.C. Jalba and J.B.T.M. Roerdink},
title = {Multiresolution {MIP} Rendering of Large Volumetric Data
Accelerated on Graphics Hardware},
booktitle = {Proc. Eurographics/IEEE VGTC Symposium on Visualization
(EuroVis)},
year = {2007},
pages = {243--250},
pdf = {http://www.cs.rug.nl/~roe/publications/morph-eurovis.pdf}
}
@InProceedings{VanDerLaan:2007:PBa,
author = {W.J. van der Laan and A.C. Jalba and J.B.T.M. Roerdink},
title = {Wavelet Lifting on Graphics Hardware for Faster Video
Decoding},
booktitle = {SIREN: Scientific ICT Research Event Netherlands, 30
October 2007, TU Delft},
year = 2007,
note = {Poster},
iwicategory = {other}
}
@InProceedings{Everts:2007:PBa,
author = {Maarten H. Everts and Henk Bekker and Adrei Jalba and Jos
B.T.M. Roerdink},
title = {Particle Based Image Segmentation with Simulated
Annealing},
booktitle = {SIREN: Scientific ICT Research Event Netherlands, 30
October 2007, TU Delft},
year = 2007,
note = {Poster},
pdf = {Everts_2007_PBa.pdf},
iwicategory = {other}
}
@InProceedings{Westenberg:2007:IVG,
author = {Michel A. Westenberg and Sacha A. F. T. van Hijum and
Andrzej T. Lulko and Oscar P. Kuipers and Jos
B. T. M. Roerdink},
title = {Interactive visualization of gene regulatory networks},
booktitle = {NBIC-ISNB 2007, Amsterdam, April 16--19},
iwicategory = {other},
note = {Poster},
year = 2007
}
@Article{VanDenBerg:2007:JOV,
author = {Ronald van den Berg and Jos B. T. M. Roerdink and Frans
W. Cornelissen},
title = {{On the Generality of Crowding: Visual Crowding in Size,
Saturation, and Hue Compared to Orientation}},
journal = {Journal of Vision},
ISSN = {1534-7362},
volume = {7},
number = {2},
pages = {1--11},
year = {2007},
month = {7},
pdf = {VanDenBerg_2007_JOV.pdf},
abstract = {Perception of peripherally viewed shapes is impaired when
surrounded by similar shapes. This phenomenon is commonly
referred to as "crowding". Although studied extensively
for perception of characters (mainly letters) and, to a
lesser extent, for orientation, little is known about
whether and how crowding affects perception of other
features. Nevertheless, current crowding models suggest
that the effect should be rather general and thus not
restricted to letters and orientation. Here, we report on
a series of experiments investigating crowding in the
following elementary feature dimensions: size, hue, and
saturation. Crowding effects in these dimensions were
benchmarked against those in the orientation domain. Our
primary finding is that all features studied show clear
signs of crowding. First, identification thresholds
increase with decreasing mask spacing. Second, for all
tested features, critical spacing appears to be roughly
half the viewing eccentricity and independent of stimulus
size, a property previously proposed as the hallmark of
crowding. Interestingly, although critical spacings are
highly comparable, crowding magnitude differs across
features: Size crowding is almost as strong as orientation
crowding, whereas the effect is much weaker for saturation
and hue. We suggest that future theories and models of
crowding should be able to accommodate these differences
in crowding effects.},
keywords = {crowding, masking, critical spacing, integration fields,
feature pooling, anisotropy, information visualization,
peripheral vision, object recognition, feature
integration},
URL = {http://journalofvision.org/7/2/14/},
eprint = {http://journalofvision.org/7/2/14/vandenBerg-2007-jov-7-2-14.pdf}
}
@InProceedings{Everts:2007:PBI,
author = {Maarten H. Everts and Henk Bekker and Adrei Jalba and Jos
B.T.M. Roerdink},
title = {{P}article {B}ased {I}mage {S}egmentation with {S}imulated
{A}nnealing},
booktitle = {Proceedings of the Thirteenth Annual Conference of the
Advanced School for Computing and Imaging (ASCI CONFERENCE
2007, June 13--15, 2007, Het Heijderbos, Heijen, The
Netherlands)},
year = {2007},
OPTpages = {},
iwicategory = {other},
pdf = {Everts_2007_PBI.pdf},
abstract = {The Charged Particle Model (CPM) by Jalba et al., is a
physically motivated deformable model for shape recovery
and segmentation. It simulates a system of charged
particles moving in an electric field generated from the
input image, whose positions in the equilibrium state are
used for curve or surface reconstruction. As an
alternative we propose to use simulated annealing to
position these particles and present a fast and simple
algorithm that is able to match CPM's results on images
with well defined contours.}
}
@InProceedings{Westenberg:2007:ETS,
author = {Michel A. Westenberg and Sacha A. F. T. van Hijum and
Andrzej T. Lulko and Oscar P. Kuipers and Jos
B. T. M. Roerdink},
title = {Interactive Visualization of Gene Regulatory Networks with
Associated Gene Expression Time Series Data},
booktitle = {Visualization in Medicine Life Sciences},
pages = {293--312},
publisher = {Springer Verlag},
year = 2007,
editor = {L. Linsen and H. Hagen and B. Hamann},
series = {Visualization and Mathematics},
address = {Berlin, Germany},
pdf = {Westenberg_2007_ETS.pdf}
}
@InProceedings{tencaat07fumapeurovis,
author = {ten Caat, M. and Maurits, N. M. and Roerdink, J. B. T. M.},
title = {Functional Unit Maps for Data-Driven Visualization of
High-Density {EEG} Coherence},
booktitle = {Proc. Eurographics/IEEE VGTC Symposium on Visualization
(EuroVis)},
year = 2007,
pages = {259--266},
pdf = {http://www.cs.rug.nl/~roe/publications/fumapeurovis07final.pdf}
}
@InProceedings{tencaat07fumapismm,
author = {ten Caat, M. and Maurits, N. M. and Roerdink, J. B. T. M.},
title = {Watershed-Based Visualization of High-Density {EEG}
Coherence},
booktitle = {Proc. 8th International Symposium on Mathematical
Morphology, Rio de Janeiro},
year = 2007,
pages = {289--300},
editor = {Banon, Gerald Jean Francis and Barrera, Junior and de
Mendoca Braga-Neto, Ulisses},
pdf = {http://www.cs.rug.nl/~roe/publications/TenCaatISMM07.pdf}
}
@InProceedings{jalba07:_surfac_coulom,
author = {A. C. Jalba and J. B. T. M. Roerdink},
title = {Surface reconstruction from noisy point clouds using
Coulomb potentials},
booktitle = {EG/IEEE VGTC 6th International Symposium on Volume
Graphics, Prague, Czech Republic, Sep. 3-4},
pages = {73--80},
editor = {H.-C. Hege and R. Machiraju},
year = 2007,
pdf = {http://www.cs.rug.nl/~roe/publications/recon_coulomb_VG07.pdf}
}
@InProceedings{ogao07:_perfor_metric_multip_selec_user,
author = {Ogao, P.J. and Visser, M.P. and Roerdink, J.B.T.M.},
title = {Performance Metrics of a 3D Multiple Selection User
Interface Tool in Virtual Environment},
booktitle = {Proc. 1st International Conference in Computer Science and
ICT (COSCIT), 5-7th February, Nairobi, Kenya},
year = 2007,
pages = {85--90}
}
@InProceedings{Ferdosi:2007:VVLHDAD,
author = {B.J. Ferdosi and H. Buddelmeijer and A. Helmi and S.C. Trager and E.A. Valentijn and M.H.F. Wilkinson and J.M. van der Hulst and J.B.T.M. Roerdink},
title = {Visualization of Very Large High-Dimensional Astronomical Data Sets},
booktitle = {SIREN: Scientific ICT Research Event Netherlands, 30 October 2007, Technische Universiteit Delft},
year = 2007,
note = {Poster},
pdf = {Ferdosi_2007_VVLHDAD.pdf},
iwicategory = {other},
abstract = {Enormous size and dimensionality of astronomical data pose a chal-
lenge in exploration, analyzing and understanding them. We survey often used astronomical visualization software. We summarize their strengths and weaknesses and try to determine where they can be improved.} }
% 2006
@PhdThesis{kruithof06:_envel_surfac_surfac_desig_and_meshin,
author = {N. G. H. Kruithof},
title = {Envelope Surfaces, Surface Design and Meshing},
school = {Institute of Mathematics and Computing Science},
year = 2006,
month = {March 13},
address = {University of Groningen, The Netherlands}
}
@Article{jalba06:_shape,
author = {Andrei C. Jalba and Michael H.F. Wilkinson and Jos
B. T. M. Roerdink},
title = {Shape representation and recognition through morphological
curvature scale spaces},
journal = {IEEE Trans.\ Image Processing},
year = 2006,
volume = 15,
number = 2,
pages = {331--341},
month = feb,
annote = {ISSN: 1057-7149},
pdf = {http://www.cs.rug.nl/~roe/publications/curvature_ip.pdf}
}
@Article{pizurica06:_mri,
author = {Aleksandra Pi\v{z}urica and Alle Meije Wink and Ewout
Vansteenkiste and Wilfried Philips and Jos
B. T. M. Roerdink},
title = {A review of wavelet denoising in {MRI} and ultrasound
brain imaging},
journal = {Current Medical Imaging Reviews},
year = 2006,
volume = 2,
number = 2,
pages = {247--260},
pdf = {http://www.cs.rug.nl/~roe/publications/CMIRdenoising2005_final.pdf}
}
@Article{wink06:_bold,
author = {Wink, Alle Meije and Roerdink, Jos B. T. M.},
title = {BOLD Noise Assumptions in {fMRI}},
journal = {International Journal of Biomedical Imaging},
year = 2006,
volume = 2006,
pages = {Article ID 12014, 11 pages},
doi = {http://dx.doi.org/10.1155/IJBI/2006/12014},
pdf = {http://www.cs.rug.nl/~roe/publications/fmrinoiseIJBI.pdf}
}
@Article{bosman06:_move,
author = {Bosman, Diederik W. J. and Blom, Evert-Jan and Ogao,
Patrick J. and Kuipers, Oscar P. and Roerdink, Jos
B. T. M.},
title = {{MOVE}: {A} Multi-level Ontology-based Visualization and
Exploration framework for genomic networks},
journal = {In Silico Biology},
year = 2006,
number = 7,
pages = 0004,
url = {http://www.bioinfo.de/isb/2006/07/0004}
}
@InProceedings{VanDenBerg:2006:ECVP,
author = {Ronald van den Berg and Aave Hannus and Harold Bekkering
and Jos B. T. M. Roerdink and Frans W. Cornelissen},
title = {Differential Feature Crowding},
booktitle = {European Conference on Visual Perception (ECVP),
St. Petersburg, Russia, August 2006},
year = {2006},
note = {Poster},
pdf = {VanDenBerg_2006_ECVP.pdf},
iwicategory = {other}
}
@InProceedings{Westenberg:2006:GGE,
author = {Michel A. Westenberg and Sacha A. F. T. van Hijum and
Oscar P. Kuipers and Jos B. T. M. Roerdink},
title = {{GENeVis}: Gene expression and network visualization},
booktitle = {3rd Int. Symposium on Networks in Bioinformatics -- ISNB
2006, Amsterdam, May 29--31},
year = 2006,
iwicategory = {other},
note = {Poster}
}
@article{Hannus:2006:JOV,
author = {Aave Hannus and Ronald van den Berg and Harold Bekkering
and Jos B. T. M. Roerdink and Frans W. Cornelissen},
title = {Visual Search Near Threshold: Some Features Are More Equal
Than Others},
journal = {Journal Vision},
ISSN = {1534-7362},
volume = {6},
number = {4},
pages = {523--540},
year = {2006},
month = {7},
pdf = {Hannus_2006_JOV.pdf},
abstract = {While searching for objects, we combine information from
multiple visual modalities. Classical theories of visual
search assume that features are processed independently
prior to an integration stage. Based on this, one would
predict that features that are equally discriminable in
single feature search should remain so in conjunction
search. We test this hypothesis by examining whether
search accuracy in feature search predicts accuracy in
conjunction search. Subjects searched for objects
combining color and orientation or size; eye movements
were recorded. Prior to the main experiment, we matched
feature discriminability, making sure that in feature
search, 70% of saccades were likely to go to the correct
target stimulus. In contrast to this symmetric single
feature discrimination performance, the conjunction search
task showed an asymmetry in feature discrimination
performance: In conjunction search, a similar percentage
of saccades went to the correct color as in feature search
but much less often to correct orientation or
size. Therefore, accuracy in feature search is a good
predictor of accuracy in conjunction search for color but
not for size and orientation. We propose two explanations
for the presence of such asymmetries in conjunction
search: the use of conjunctively tuned channels and
differential crowding effects for different features.},
keywords = {conjunction search, feature search, color discrimination,
orientation discrimination, size discrimination, crowding},
doi = {http://dx.doi.org/10.1167/6.4.15},
eprint =
{http://journalofvision.org/6/4/15/Hannus-2006-jov-6-4-15.pdf}
}
@InProceedings{Westenberg:2006:GEN,
author = {Michel A. Westenberg and Sacha A. F. T. van Hijum and
Oscar P. Kuipers and Jos B. T. M. Roerdink},
title = {Gene expression and network visualization},
booktitle = {Netherlands Bioinformatics Conference, Ede-Wageningen,
April 24},
year = 2006,
iwicategory = {other},
note = {Poster}
}
@InProceedings{jalba06:_effic_surfac_recon_noisy_data,
author = {Andrei C. Jalba and Jos B. T. M. Roerdink},
title = {Efficient Surface Reconstruction from Noisy Data using
Regularized Membrane Potentials},
booktitle = {Data Visualization Eurovis 2006. Eurographics/IEEE VGTC
Symposium on Visualization, May 8-10, Lisbon, Portugal},
editor = {B. Sousa Santos and T. Ertl and K. Joy},
year = 2006,
publisher = {The Eurographics Association},
pages = {83--90},
pdf = {http://www.cs.rug.nl/~roe/publications/recon_eurovis.pdf}
}
@InProceedings{jalba06,
author = {Andrei C. Jalba and Jos B. T. M. Roerdink},
title = {A physically-motivated deformable model based on fluid
dynamics},
booktitle = {Computer Vision --- ECCV 2006},
editor = {A. Leonardis and H. Bischof and A. Pinz},
volume = 3951,
series = lncs,
year = 2006,
publisher = {Springer, Wien, New York},
pages = {496-507, Proceedings, Part I},
url = {http://dx.doi.org/10.1007/11744023_39},
annote = {9th European Conf. on Computer Vision, Graz, Austria, May
2006},
pdf = {http://www.cs.rug.nl/~roe/publications/eccv-printed.pdf}
}
@InProceedings{wink06:_extrac_haemod_respon_funct_time,
author = {Wink, Alle~Meije and Jos B. T. M. Roerdink},
title = {Extracting the Haemodynamic Response Function from fMRI
Time Series using Fourier-Wavelet Regularised
Deconvolution with Orthogonal Spline Wavelets},
booktitle = {Proc. 14th European Signal Processing Conference
(EUSIPCO'06), September 4 - 8, Florence, Italy},
year = 2006,
pdf = {http://www.cs.rug.nl/~roe/publications/fftward_eusipco.pdf}
}
% 2005 @mastersthesis { WilliamsD:quacaa, author={David Williams}, title={Quantum Computer Architecture, Assembly Language and Compilation}, school={University of Warwick}, year={2004}, abstract={The design for a quantum computer based on the QRAM architecture is presented, detailing its method of operation when executing both classical and quantum algorithms. An assembly-like instructions set for this machine is also defined which allows it to be universal in the set of quantum algorithms it can represent. Next a look at the issue of compiling a high-level quantum programming language into 'byte-code' for the machine designed previously is presented. The transformation of programming language constructs, decomposition of complex quantum operations, and some possible optimisation techniques are studied. Lastly the notions of communication and concurrency are introduced to the quantum computer. The necessary instructions are added to it and demonstrations of quantum teleportation and the dense-coding protocol are provided. The then work finishes with a look at high-level languages allowing communication and discusses how they might be compiled for the new architecture.} }
@inproceedings {
Nagarajan:2005:QRAM,
author={Rajagopal Nagarajan and Nikolaos Papanikolaou and David Williams},
booktitle={Proceedings of the 3rd International Workshop on Quantum Programming Languages},
title={Simulating and Compiling Code for the Sequential Quantum Random Access Machine},
series={Electronic Notes in Theoretical Computer Science},
publisher={Elsevier Science},
url={http://www.mathstat.dal.ca/~selinger/qpl2005/proceedings.html},
year={2005},
abstract={We present the SQRAM architecture for quantum computing, which is based on Knill's QRAM model. We detail a suitable instruction set, which implements a universal set of quantum gates, and demonstrate the operation of the SQRAM with Deutsch's quantum algorithm. The compilation of high-level quantum programs for the SQRAM machine is considered; we present templates for quantum assembly code and a method for decomposing matrices for complex quantum operations. The SQRAM simulator and compiler are discussed, along with directions for future work.}
}
@Article{muresan05:_autom_correc_spin_histor_relat,
author = {Lucian Muresan and Remco Renken and Jos B. T. M. Roerdink
and Hendrikus Duifhuis},
title = {Automated Correction of Spin-History Related Motion
Artefacts in {fMRI}: Simulated and Phantom Data},
journal = {IEEE Transactions on Biomedical Engineering},
year = 2005,
volume = 52,
number = 8,
pages = {1450--1460},
pdf = {http://www.cs.rug.nl/~roe/publications/spin-history.pdf}
}
@Article{roerdink05:_morph_pyram_multir_mip_render,
author = {Jos B. T. M. Roerdink},
title = {Morphological Pyramids in Multiresolution {MIP} Rendering
of Large Volume Data: Survey and New Results},
journal = {J.\ Math.\ Imag.\ Vision},
year = 2005,
volume = 22,
number = {2/3},
pages = {143--157},
url = {http://dx.doi.org/10.1007/s10851-005-4887-1},
pdf = {http://www.cs.rug.nl/~roe/publications/cd-pyramid.pdf}
}
@Article{jalba05:_autom_diatom_ident_contour_analy,
author = {Andrei C. Jalba and Michael H. F. Wilkinson and Jos
B. T. M. Roerdink and Micha M. Bayer and Stephen Juggins},
title = {Automatic Diatom Identification using Contour Analysis by
Morphological Curvature Scale Spaces},
journal = {Machine Vision and Applications},
year = 2005,
volume = 16,
number = 4,
pages = {217--228},
annote = {IWI Report 2001-9-05},
pdf = {http://www.cs.rug.nl/~roe/publications/curvature_mva.pdf}
}
@InProceedings{VanDenBerg:2005:ECVP,
author = {Ronald van den Berg and Aave Hannus and Jos
B. T. M. Roerdink and Frans W. Cornelissen},
title = {A Colour-Size Processing Asymmetry in Visual Conjunction
Search},
booktitle = {European Conference on Visual Perception (ECVP), A Coruna,
Spain, August 2005},
year = {2005},
note = {Poster},
pdf = {VanDenBerg_2005_ECVP.pdf},
iwicategory = {other}
}
@InProceedings{VanDenBerg:2005:APGV,
author = {Ronald van den Berg, Frans W. Cornelissen, Aave Hannus,
Jos B. T. M. Roerdink},
title = {Simultaneous Colour Search Renders Other Object Features
Less Salient},
booktitle = {Second Symposium on Applied Perception in Graphics and
Visualization (APGV), A Coruna, Spain, August 2005},
year = {2005},
note = {Poster},
pdf = {VanDenBerg_2005_APGV.pdf},
iwicategory = {other}
}
@Article{Westenberg:2005:DVF,
author = {Michel A. Westenberg and Thomas Ertl},
title = {Denoising {2-D} Vector Fields by Vector Wavelet
Thresholding},
journal = {Journal of WSCG},
pdf = {Westenberg_2005_DVF.pdf},
year = 2005,
volume = 13,
number = 1,
pages = {33--40}
}
@InProceedings{wim05:_euclid,
author = {Wim H. Hesselink and Menno Visser and Jos
B. T. M. Roerdink},
editor = {Christian Ronse and Laurent Najman and Etienne
Decenci\`ere },
title = {{Euclidean} skeletons of {3D} data sets in linear time by
the integer medial axis transform},
booktitle = {Mathematical Morphology: 40 Years On (Proc. 7th
Intern. Symp. on Mathematical Morphology, April 18-20)},
year = 2005,
publisher = {Springer, Wien, New York},
pages = {259--268},
pdf = {http://www.cs.rug.nl/~roe/publications/ima.pdf}
}
@InProceedings{caat05:_tiled_paral_coord_visual_time,
author = {M. ten Caat and N. M. Maurits and J. B. T. M. Roerdink},
title = {Tiled Parallel Coordinates for the Visualization of
Time-Varying Multichannel {EEG} Data},
booktitle = {Proc. Eurographics -- IEEE VGTC Symposium on
Visualization, June 1-3, Leeds, United Kingdom },
editor = {K. W. Brodlie and D. J. Duke and K. I. Joy},
year = 2005,
publisher = {The Eurographics Association},
pages = {61--67},
pdf = {http://www.cs.rug.nl/~roe/publications/TPCfinal.pdf}
}
% 2004
@PhdThesis{meijster04:_effic_sequen_and_paral_algor,
author = {A. Meijster},
title = {Efficient sequential and Parallel Algorithms for
Morphological Image Processing},
school = {Institute of Mathematics and Computing Science},
year = 2004,
month = {March 5},
address = {University of Groningen, The Netherlands}
}
@PhdThesis{wink04:_wavel_based_method_for_analy,
author = {A. M. Wink},
title = {Wavelet-based Methods for the Analysis of {fMRI} Time
Series},
school = {Institute of Mathematics and Computing Science},
year = 2004,
month = {September 10},
address = {University of Groningen, The Netherlands}
}
@PhdThesis{jalba04:_autom_image_segmen_and_analy,
author = {A. C. Jalba},
title = {Automatic image segmentation and analysis with
applications to diatom identification},
school = {Institute of Mathematics and Computing Science},
year = 2004,
month = {5 July},
address = {University of Groningen, The Netherlands}
}
@Article{jalba04:_morph,
author = {Andrei C. Jalba and Michael H.F. Wilkinson and Jos
B. T. M. Roerdink},
title = {Morphological hat-transform scale spaces and their use in
pattern classification},
journal = {Pattern Recognition},
volume = 37,
number = 5,
year = 2004,
pages = {901--915},
annote = {May},
pdf = {http://www.cs.rug.nl/~roe/publications/hatt2d.pdf}
}
@Article{wink04:_denois_mr,
author = {Wink, Alle~Meije and Jos B. T. M. Roerdink},
title = {Denoising functional {MR} images: a comparison of wavelet
denoising and {Gaussian} smoothing},
journal = {IEEE Trans.\ Med.\ Imaging},
volume = 23,
number = 3,
pages = {374--387},
year = 2004,
annote = {March 2004. Based on Report IWI 2002-9-14, sep. 2002},
pdf = {http://www.cs.rug.nl/~roe/publications/spatial_fmri.pdf}
}
@Article{jalba04:_cpm,
author = {Andrei C. Jalba and Michael H.F. Wilkinson and Jos
B. T. M. Roerdink},
title = {{CPM}: A Deformable Model for Shape Recovery and
Segmentation Based on Charged Particles},
journal = {IEEE Trans.\ Pattern\ Anal.\ Machine\ Intell.},
year = 2004,
volume = 26,
number = 10,
pages = {1320--1335},
annote = {IWI 2003-10-06},
pdf = {http://www.cs.rug.nl/~roe/publications/cpm.pdf}
}
@Article{jalba04:_autom,
author = {Andrei C. Jalba and Michael H.F. Wilkinson and Jos
B. T. M. Roerdink},
title = {Automatic segmentation of diatom images for
classification},
journal = {Microscopy Research and Technique},
year = 2004,
volume = 65,
number = {1-2},
pages = {72--85},
month = sep,
pdf = {http://www.cs.rug.nl/~roe/publications/seg_mrt.pdf}
}
@Article{Grigorescu:2004:CBD,
author = {Cosmin Grigorescu and Nicolai Petkov and Michel
A. Westenberg},
title = {Contour and boundary detection improved by surround
suppression of texture edges},
journal = {Image and Vision Computing},
pdf = {Grigorescu_2004_CBD.pdf},
year = 2004,
volume = 22,
number = 8,
pages = {609--622}
}
@InProceedings{Westenberg:2005:WRU,
author = {Michel A. Westenberg and Thomas Ertl},
title = {Wavelet-based representation of uniform multi-component
data},
booktitle = {Vision, Modeling, and Visualization 2005},
pages = {351--358},
year = 2004,
editor = {G. Greiner and J. Hornegger and H. Niemann and
M. Stamminger},
address = {Erlangen, Germany},
month = {November 16--18},
pdf = {Westenberg_2005_WRU.pdf}
}
@InProceedings{Westenberg:2004:VWT,
author = {Michel A. Westenberg and Thomas Ertl},
title = {Vector wavelet thresholding for vector field denoising},
booktitle = {IEEE Visualization 2004 Posters Compendium},
pdf = {Westenberg_2004_VWT.pdf},
pages = {123--124},
year = 2004,
iwicategory = {other}
}
@Article{Petkov:2004:BNS,
author = {Nicolai Petkov and Michel A. Westenberg},
title = {Band-limited noise suppresses contour perception not only
of letters but of any objects},
journal = {Perception},
year = 2004,
volume = 33,
number = {suppl.},
pages = {150b},
iwicategory = {other}
}
@Article{Petkov:2004:NRF,
author = {Nicolai Petkov and Michel A. Westenberg},
title = {Non-classical receptive field inhibition and its relation
to orientation-contrast pop-out and line and contour
saliency: a computational approach},
journal = {Perception},
year = 2004,
volume = 33,
number = {suppl.},
pages = {68b},
iwicategory = {other}
}
@InProceedings{jalba04:_autom_image_segmen_using_defor,
author = {Andrei C. Jalba and Michael H. F. Wilkinson and Jos
B. T. M. Roerdink},
title = {Automatic Image Segmentation Using a Deformable Model
Based on Charged Particles},
year = 2004,
booktitle = {Image Analysis and Recognition: International Conference
ICIAR 2004, Porto, Portugal, September 29- October 1,
2004, Proceedings, Part I},
editor = {Aur\'elio Campilho and Mohamed Kamel},
volume = 3211,
series = {Lecture Notes in Computer Science,},
pages = {1--8},
annote = {ISBN: 3-540-23223-0},
pdf = {http://www.cs.rug.nl/~roe/publications/cpm_iciar.pdf}
}
% 2003 @Article{roerdink01:_multir_maxim_inten_volum_render,
author = {Jos B. T. M. Roerdink},
title = {Multiresolution Maximum Intensity Volume Rendering by
Morphological Adjunction Pyramids},
journal = {IEEE Trans.\ Image Processing},
year = 2003,
volume = 12,
number = 6,
pages = {653--660},
month = jun,
annote = {Report IWI 2001-9-03, sep. 01},
pdf = {http://www.cs.rug.nl/~roe/publications/adjpyr.pdf}
}
@Article{Grigorescu:2003:CDB,
author = {Cosmin Grigorescu and Nicolai Petkov and Michel
A. Westenberg},
title = {Contour Detection Based on Nonclassical Receptive Field
Inhibition},
journal = {IEEE Trans. Image Processing},
pdf = {Grigorescu_2003_CDB.pdf},
year = 2003,
volume = 12,
number = 7,
pages = {729--739}
}
@InProceedings{Grigorescu:2003:CDO,
author = {Cosmin Grigorescu and Nicolai Petkov and Michel
A. Westenberg},
title = {Contour Detection Operators Based on Surround Inhibition},
booktitle = {{IEEE} International Conference on Image Processing},
year = 2003,
volume = {III},
pages = {437--440},
address = {Barcelona, Spain},
month = {September 14--17},
pdf = {Grigorescu_2003_CDO.pdf}
}
@Article{Grigorescu:2003:RNI,
author = {Cosmin Grigorescu and Nicolai Petkov and Michel
A. Westenberg},
title = {The role of non-{CRF} inhibition in contour detection},
journal = {Journal of WSCG},
year = 2003,
volume = 11,
number = 2,
pages = {197--204},
pdf = {Grigorescu_2003_RNI.pdf}
}
@Article{Petkov:2003:SCP,
author = {Nicolai Petkov and Michel A. Westenberg},
title = {Suppression of Contour Perception by Band-Limited Noise
and Its Relation to Non-Classical Receptive Field
Inhibition},
journal = {Biological Cybernetics},
pdf = {Petkov_2003_SCP.pdf},
year = 2003,
volume = 88,
number = 3,
pages = {236--246}
}
@Proceedings{Petkov:2003:CAI,
year = 2003,
title = {10th International Conference on Computer Analysis of
Images and Patterns},
editor = {Nicolai Petkov and Michel A. Westenberg},
series = {Lecture Notes in Computer Science},
volume = {2756},
publisher = {Springer Verlag}
}
@Article{Petkov:2003:NRF,
author = {Nicolai Petkov and Michel A. Westenberg and Cosmin
Grigorescu},
title = {Non-classical receptive field inhibition and contour
detection},
journal = {Perception},
year = 2003,
volume = 32,
number = {suppl.},
iwicategory = {other},
pages = {1--2}
}
@InProceedings{Wilkinson:2003:BVS,
author = {Michael H. F. Wilkinson and Tsjipke Wijbenga and Gijs de
Vries and Michel A. Westenberg},
title = {Blood Vessel Segmentation using Moving-Window Robust
Automatic Threshold Selection},
booktitle = {{IEEE} International Conference on Image Processing},
year = 2003,
volume = {II},
pages = {1093--1096},
address = {Barcelona, Spain},
month = {September 14--17},
pdf = {Wilkinson_2003_BVS.pdf}
}
@InProceedings{roerdink03,
author = {Jos B. T. M. Roerdink},
title = {A new class of morphological pyramids for multiresolution
image analysis},
booktitle = {Geometry, Morphology, and Computational Imaging},
pages = {165--175},
publisher = {Springer, Wien, New York},
year = 2003,
editor = {T. Asano and R. Klette and C. Ronse},
volume = 2616,
series = {Lecture Notes in Computer Science,},
annote = {Proc. 11th Intern. Workshop on Theoretical Foundations of
Computer Vision, April 2002},
pdf = {http://www.cs.rug.nl/~roe/publications/dagstuhl02.pdf}
}
@InProceedings{muresan03:_motion,
author = {Lucian Muresan and Jos B. T. M. Roerdink},
title = {Motion artefacts during k-space acquisition as an
encryption-decryption problem},
booktitle = {Physica Medica, vol. XIX, N. 1, Jan. -March 2003,
Abstracts Session Medical Physics and Engineering 2003,
VIII EFOMP Congress, May 20-23, Eindhoven},
pages = {61--62},
year = 2003
}
@InProceedings{jalba03:_autom,
author = {Andrei C. Jalba and Jos B. T. M. Roerdink},
title = {Automatic segmentation of diatom images},
booktitle = {Proc. CAIP'2003 (Computer Analysis of Images and
Patterns), Groningen, August 25-27},
pages = {329--336},
publisher = {Springer, Wien, New York},
year = 2003,
editor = {Nicolai Petkov and Michel A. Westenberg},
volume = 2756,
series = {Lecture Notes in Computer Science},
pdf = {http://www.cs.rug.nl/~roe/publications/segm_caip.pdf}
}
@InProceedings{jalba03:_morph,
author = {A. C. Jalba and J. B. T. M. Roerdink and
M. H. F. Wilkinson},
title = {Morphological hat-transform scale spaces and their use in
texture classification},
booktitle = {Proc. ICIP'2003 (Int. Conf. Image Processing), Barcelona,
Spain, Sept. 14-17},
volume = {I},
pages = {329--332},
year = 2003,
pdf = {http://www.cs.rug.nl/~roe/publications/hatt2d_ICIP.pdf}
}
@InProceedings{wink03:_effec_image_enhan_statis_analy_funct_neuroim,
author = {A. M. Wink and J. B. T. M. Roerdink},
title = {The Effect of Image Enhancement on the Statistical
Analysis of Functional Neuroimages: Wavelet-Based
Denoising and {Gaussian} Smoothing},
booktitle = {Proc. {SPIE}: Medical Imaging},
pages = {1320--1330},
year = 2003,
note = {15-20 February, San Diego, USA},
volume = 5032
}
@InProceedings{roerdink03:_visual_large_data_sets_applic_life_scien,
author = {Jos B. T. M. Roerdink},
title = {Visualization of Large Data Sets with Applications in the
Life Sciences},
booktitle = {Large Data Sets, Proc. SSS'03, Royal Dutch Academy of
Sciences, Amsterdam},
pages = {43--54},
publisher = {Netherlands Society for Statistics and Operations
Research},
year = 2003,
editor = {S. H. Heisterkamp and R. H. Koning},
isbn = {90-8084-16-1-7}
}
% 2002 @InProceedings{Grigorescu:2002:ICD,
author = {Cosmin Grigorescu and Nicolai Petkov and Michel
A. Westenberg},
title = {Improved contour detection by non-classical receptive
field inhibition},
pdf = {Grigorescu_2002_ICD.pdf},
booktitle = {Biologically Motivated Computer Vision},
pages = {50--59},
year = 2002,
editor = {H. H. B\"ulthoff and S.-W. Lee and T. A. Poggio and
C. Wallraven},
volume = 2525,
series = {Lecture Notes in Computer Science},
publisher = {Springer}
}
@InProceedings{Grigorescu:2002:PEC,
author = {Cosmin Grigorescu and Nicolai Petkov and Michel
A. Westenberg},
title = {Performance Enhancement of Contour Detectors by Surround
Inhibition},
pdf = {Grigorescu_2002_PEC.pdf},
booktitle = {International Conference on Computer Vision and Graphics},
pages = {313--318},
year = 2002,
editor = {K. Wojciechowski},
address = {Zakopane, Poland},
month = {September 25--29}
}
@InProceedings{Meijster:2002:ISP,
author = {Arnold Meijster and Michel A. Westenberg and Michael
H. F. Wilkinson},
title = {Interactive shape preserving filtering and visualization
of volumetric data},
pdf = {Meijster_2002_ISP.pdf},
booktitle = {Fifth IASTED Conference on Computer Graphics and Imaging,
CGIM 2002},
pages = {640--643},
year = 2002,
address = {Kauai, Hawaii, USA},
month = {August 12--14}
}
@InProceedings{Westenberg:2002:MMI,
author = {Michel A. Westenberg and Jos B. T. M. Roerdink},
title = {Mixed-method identifications},
booktitle = {Automatic Diatom Identification},
pages = {245--257},
publisher = {World Scientific Publishing},
year = 2002,
editor = {H. du Buf and M. Bayer},
chapter = 12,
address = {Singapore}
}
@InProceedings{michael02:_ident,
author = {Michael H. F. Wilkinson and Andrei C. Jalba and Erik
R. Urbach and Jos B. T. M. Roerdink},
title = {Identification by mathematical morphology},
booktitle = {Automatic Diatom Identification},
series = {Series in Machine Perception and Artificial Intelligence},
volume = 51,
publisher = {World Scientific Publishing Co., Singapore},
editor = {Du~Buf, J. M. H. and Bayer, M. M.},
chapter = 11,
year = 2002,
pages = {221--244}
}
@InProceedings{roerdink02:_compar_morph_pyram_multir_mip_volum_render,
author = {Jos B. T. M. Roerdink},
title = {Comparison of Morphological Pyramids for Multiresolution
{MIP} Volume Rendering},
booktitle = {Data Visualization 2002. Proc. Eurographics -- IEEE TCVG
Symposium, May 27-29, 2002, Barcelona, Spain},
editor = {D. Ebert and P. Brunet and I. Navazo},
year = 2002,
publisher = {ACM, New York},
pages = {61--70},
pdf = {http://www.cs.rug.nl/~roe/publications/vissym02.pdf}
}
@InProceedings{wink02:_enhan,
author = {Wink, Alle~Meije and Jos B. T. M. Roerdink},
title = {Enhancing functional neuroimages: wavelet denoising as an
alternative to {Gaussian} smoothing},
booktitle = {Proc. Intern. Conf. on Computer Vision and Graphics (ICCVG
2002), September 25-29, Zakopane, Poland},
pages = {787--792},
year = 2002,
pdf = {http://www.cs.rug.nl/~roe/publications/spatfmriPaper.pdf}
}
@InProceedings{muresan02:_posit,
author = {Lucian Muresan and Remco Renken and Jos B. T. M. Roerdink
and Hendrikus Duifhuis},
title = {Position-history and spin-history artifacts in {fMRI}
time-series},
booktitle = {Medical Imaging 2002: Physiology and Function from
Multidimensional Images},
publisher = {SPIE},
year = 2002,
pages = {444--451},
editor = {A. V. Clough and C.-T. Chen},
volume = 4683,
series = {Proc. of SPIE},
pdf = {http://www.cs.rug.nl/~roe/publications/spie_fmri_corrected.pdf}
}
% 2001 @InProceedings{Wilkinson:2001:SPF,
author = {Michael H. F. Wilkinson and Michel A. Westenberg},
title = {Shape preserving filament enhancement filtering},
pdf = {Wilkinson_2001_SPF.pdf},
booktitle = {Medical Image Computing and Computer-Assisted Intervention
-- MICCAI 2001},
pages = {770--777},
year = 2001,
editor = {W. J. Niessen and M. A. Viergever},
volume = 2208,
series = {Lecture Notes in Computer Science},
publisher = {Springer}
}
@Article{Westenberg:2001:EFW,
author = {Michel A. Westenberg and Jos B. T. M. Roerdink},
title = {An extension of {F}ourier-wavelet volume rendering by view
interpolation},
journal = {Journal of Mathematical Imaging and Vision},
pdf = {Westenberg_2001_EFW.pdf},
year = 2001,
volume = 14,
number = 2,
pages = {103--115}
}
@PhdThesis{Westenberg:2001:WBX,
author = {Michel A. Westenberg},
title = {Wavelet-Based X-Ray Volume Rendering},
school = {Institute of Mathematics and Computing Science},
year = 2001,
month = {14 September},
address = {University of Groningen, The Netherlands}
}
@InProceedings{roerdink01:_multir_maxim_inten_volum_render_morph_pyram,
author = {Jos B. T. M. Roerdink},
title = {Multiresolution Maximum Intensity Volume Rendering by
Morphological Pyramids},
booktitle = {Data Visualization 2001. Proc. Joint Eurographics -- IEEE
TCVG Symposium on Visualization, May 28-30, 2001, Ascona,
Switzerland},
editor = {D. Ebert and J. M. Favre and R. Peikert},
year = 2001,
publisher = {Springer, Wien, New York},
pages = {45--54},
annote = {Report IWI 2000-9-14, dec. 2000},
pdf = {http://www.cs.rug.nl/~roe/publications/vissym01.pdf}
}
@InProceedings{bekker01:_effic_algor_calcul_minkow_sum_convex_polyh,
author = {Henk Bekker and Jos B. T. M. Roerdink},
title = {An Efficient Algorithm to Calculate the {Minkowski} Sum of
Convex {3D} Polyhedra},
booktitle = {Computational Science - ICCS 2001},
pages = {619-628 (Part I)},
publisher = {Springer, Wien, New York},
year = 2001,
editor = {V. N. Alexandrov and J. J. Dongarra and B. A. Juliano and
R. S. Renner and C. J. Kenneth Tan},
volume = {2074},
series = {Lecture Notes in Computer Science,},
annote = {Intern. Conf. San Francisco, CA, USA, May 2001},
annote = {IWI Report 2001-9-01},
pdf = {http://www.cs.rug.nl/~roe/publications/ccs3.pdf}
}
@InProceedings{bayer01:_adiac,
author = {M. M. Bayer and M. R. Pullan and D. G. Mann and S. Juggins
and A. Ciobanu and L. Santos and H. Shahbazkia and H. du
Buf and S. Fischer and H. Bunke and M. H. F. Wilkinson and
J. B. T. M. Roerdink and J. Pech-Pacheco and G. Cristobal
and V. Cirimele and B. Ludes},
title = {ADIAC: Using computer vision technology for automatic
diatom identification},
booktitle = {Proceedings of the 16th International Diatom Symposium,
Athens, Greece, 25 aug -1 sept 2000},
year = 2001,
pages = {537--562},
editor = {A. Economou - Amilli}
}
@InProceedings{roerdink02:_simil,
author = {Jos B. T. M. Roerdink and Henk Bekker},
title = {Similarity measure computation of convex polyhedra
revisited},
booktitle = {Digital and Image Geometry},
publisher = {Springer, Wien, New York},
year = 2001,
pages = {389--399},
editor = {G. Bertrand and A. Imiya and R. Klette},
volume = 2243,
series = lncs,
url = {http://dx.doi.org/10.1007/3-540-45576-0_23},
annote = {TechReport 2001-9-02, Institute for Mathematics and
Computing Science, University of Groningen},
pdf = {http://www.cs.rug.nl/~roe/publications/dagstuhl00.pdf}
}
% 2000
@article{tuzikov99:_simil_measur_convex_polyh_based_minkow_addit,
author = "A. V. Tuzikov and J. B. T. M. Roerdink and
H. J. A. M. Heijmans",
journal = {Pattern Recognition},
title = "Similarity Measures for Convex Polyhedra Based on
{M}inkowski Addition",
year = 2000,
annote = may,
volume = 33,
number = 6,
pages = {979--995},
annote = {Report CS-R9708, Department of Computer Science,
University of Groningen, 1997},
pdf = {http://www.cs.rug.nl/~roe/publications/simpoly.pdf}
}
@Article{roerdink99:_group_award,
author = {J. B. T. M. Roerdink},
journal = {Pattern Recognition},
title = {Group morphology},
year = 2000,
annote = {may},
volume = 33,
number = 6,
pages = {877--895},
doi = {https://doi.org/10.1016/S0031-3203%2899%2900152-1},
url = {https://www.sciencedirect.com/science/article/abs/pii/S0031320399001521?via%3Dihub},
note = {Honorable Mention Winner of the 27-th Annual
Pattern Recognition Society Award},
annote = {http://www.rug.nl/research/portal/files/3114383/2000PattRecognRoerdink.pdf}
annote = {http://www.cs.rug.nl/~roe/publications/2000PattRecognRoerdink-1.pdf}
pdf = {http://www.cs.rug.nl/~roe/publications/group_mm.pdf}
}
@Article{Westenberg:2000:FDV,
author = {Michel A. Westenberg and Jos B. T. M. Roerdink},
title = {Frequency Domain Volume Rendering by the Wavelet {X}-Ray
Transform},
journal = {IEEE Transactions on Image Processing},
pdf = {Westenberg_2000_FDV.pdf},
year = 2000,
volume = 9,
number = 7,
pages = {1249--1261}
}
@InProceedings{Westenberg:2000:XVR,
author = {Michel A. Westenberg and Jos B. T. M. Roerdink},
title = {X-Ray Volume Rendering by Hierarchical Wavelet Splatting},
pdf = {Westenberg_2000_XVR.pdf},
booktitle = {Proceedings of the 15th International Conference on
Pattern Recognition},
pages = {163--166},
year = 2000,
address = {Barcelona, Spain},
month = {September}
}
@Article{Westenberg:2000:TSS,
author = {Michel A. Westenberg and Jos B. T. M. Roerdink},
title = {X-Ray Volume Rendering Through Two-Stage Splatting},
journal = {Machine Graphics \& Vision},
pdf = {Westenberg_2000_TSS.pdf},
year = 2000,
volume = 9,
number = {1/2},
pages = {307--314},
note = {\emph{Best Paper Award GKPO'2000, 6th International
Conference on Computer Graphics and Image Processing, May
15-19, 2000, Podlesice, Poland}}
}
@InProceedings{wilkinson00:_diatom,
author = {M. H. F. Wilkinson and J. B. T. M. Roerdink and S. Droop
and M. Bayer},
title = {Diatom contour analysis using morphological curvature
scale spaces},
booktitle = {Proc. 15th Intern. Conf. on Pattern Recognition
(ICPR'2000), Barcelona, Sep. 3-7},
year = 2000,
pages = {656--659},
annote = {Report IWI 99-9-12, dec. 1999},
pdf = {http://www.cs.rug.nl/~roe/publications/icpr2000.pdf}
}
@InProceedings{wilkinson00:_fast,
author = "M. H. F. Wilkinson and J. B. T. M. Roerdink",
EDITOR = {John Goutsias and Luc Vincent and Dan S. Bloomberg},
title = "Fast morphological attribute operations using {Tarjan's}
union-find algorithm",
BOOKTITLE = {Mathematical Morphology and its Applications to Image and
Signal Processing},
YEAR = 2000,
publisher = {Kluwer Acad.\ Publ., Dordrecht},
PAGES = {311--320},
pdf = {http://www.cs.rug.nl/~roe/publications/ismm2000.pdf}
}
@InProceedings{meijster00,
author = {Arnold Meijster and J. B. T. M. Roerdink and Wim
H. Hesselink},
editor = {John Goutsias and Luc Vincent and Dan S. Bloomberg},
title = {A general algorithm for computing distance transforms in
linear time},
booktitle = {Mathematical Morphology and its Applications to Image and
Signal Processing},
year = 2000,
publisher = {Kluwer Acad.\ Publ., Dordrecht},
pages = {331--340},
pdf = {http://www.cs.rug.nl/~roe/publications/dt.pdf}
}
@article{roerdink99,
author = {J. B. T. M. Roerdink and A. Meijster},
title = {The watershed transform: definitions, algorithms, and
parallellization strategies},
journal = {Fundamenta Informaticae},
year = 2000,
volume = 41,
pages = {187--228},
annote = {Report IWI 99-9-06, Institute for Mathematics and
Computing Science, 1999},
pdf = {http://www.cs.rug.nl/~roe/publications/parwshed.pdf}
}
% 1999 @Article{Roerdink:1999:WVV,
author = {Jos B. T. M. Roerdink and Michel A. Westenberg},
title = {Wavelet-Based Volume Visualization},
journal = {Nieuw Archief voor Wiskunde},
pdf = {Roerdink_1999_WVV.pdf},
year = 1999,
volume = 17,
number = 2,
pages = {149--158},
pdf = {http://www.cs.rug.nl/~roe/publications/mc98.pdf}
}
@InProceedings{buf99:_diatom_ident,
AUTHOR = {Hans du Buf and Micha Bayer and Stephen Droop and Richie
Head and Steve Juggins and Stefan Fischer and Horst Bunke
and Michael Wilkinson and Jos Roerdink and Jos\'e
Pech-Pacheco and Gabriel Crist\'obal and Hamid Shahbazkia
and Adrian Ciobanu},
TITLE = {Diatom Identification: a Double Challenge Called {ADIAC}},
BOOKTITLE = {Proc. 10th Int. Conf. on Image Analysis and Processing
(ICIAP'99), Venice, Italy, September 27-29},
PAGES = {734--739},
YEAR = 1999,
pdf = {http://www.cs.rug.nl/~roe/publications/iciap99.pdf}
}
@InProceedings{bekker99:_calcul,
author = "Henk Bekker and Jos B. T. M. Roerdink",
title = "Calculating critical orientations of polyhedra for
similarity measure evaluation",
BOOKTITLE = {Proc. 2\textsuperscript{nd} Annual IASTED International Conference on
Computer Graphics and Imaging, Palm Springs, California
USA, Oct. 25-27},
PAGES = {106--111},
YEAR = 1999,
annote = {Report IWI 99-9-05, Institute for Mathematics and
Computing Science, University of Groningen},
pdf = {http://www.cs.rug.nl/~roe/publications/cgim99.pdf}
}
% 1998
@Article{Roerdink:1998:DTR,
author = {Jos B. T. M. Roerdink and Michel A. Westenberg},
title = {Data-parallel tomographic reconstruction: A comparison of
filtered backprojection and direct {Fourier}
reconstruction},
journal = {Parallel Computing},
pdf = {Roerdink_1998_DTR.pdf},
year = 1998,
volume = 24,
pages = {2129--2142}
}
@InProceedings{MeijsterRoerdink:98_award,
AUTHOR = {Arnold Meijster and Jos B. T. M. Roerdink},
TITLE = {A disjoint set algorithm for the watershed transform},
BOOKTITLE = {Proc. IX European Signal Processing Conference
(EUSIPCO'98), September 8 - 11, 1998, Rhodes, Greece},
EDITOR = {S. Theodoridis and I. Pitas and A. Stouraitis and
N. Kalouptsidis},
publisher = {Typorama Publications},
PAGES = {1665--1668},
YEAR = 1998,
NOTE = {\textbf{Note: Received best young author paper award for
EUSIPCO-98}},
pdf = {http://www.cs.rug.nl/~roe/publications/eusipco-published.pdf}
}
@InProceedings{TuzRoeHeijShey:98,
author = {Alexander V. Tuzikov and Jos B. T. M. Roerdink and Henk
J. A. M. Heijmans and Stanislav V. Sheynin},
title = {Measures and Indices of Reflection Symmetry for Convex
Polyhedra},
booktitle = {Mathematical Morphology and its Applications to Image and
Signal Processing},
publisher = {Kluwer Acad.\ Publ., Dordrecht},
year = 1998,
editor = {Henk J. A. M. Heijmans and Jos B. T. M. Roerdink},
series = {Computational Imaging and Vision},
pages = {59--65},
pdf = {http://www.cs.rug.nl/~roe/publications/ismm98.pdf}
}
@InProceedings{RoeDIP:98,
author = {J. B. T. M. Roerdink},
title = {An Introduction to Digital Image Processing},
booktitle = {Digital Image Analysis of Microbes: Imaging, Morphometry,
Fluorometry and Motility Techniques and Applications},
publisher = {John Wiley and Sons Ltd.},
year = {1998},
editor = {M. H. F. Wilkinson and F. Schut},
series = {Modern Microbiological Methods (M. Goodfellow series
editor)},
chapter = 1,
pages = {3--36}
}
@Book{HeijmansRoerdink:98,
title = {Mathematical Morphology and its Applications to Image and
Signal Processing},
publisher = {Kluwer Acad.\ Publ., Dordrecht},
year = 1998,
author = {Henk J. A. M. Heijmans and Jos B. T. M. Roerdink (eds.)},
series = {Computational Imaging and Vision},
volume = 12,
annote = {ISBN 0-7923-5133-9, 442 pp.}
}
% 1997 @InProceedings{Westenberg:1997:PTR,
author = {Michel A. Westenberg and Jos B. T. M. Roerdink},
title = {Parallelisation of Tomographic Reconstruction Methods},
booktitle = {Proc. fourth Groningen International Information
Technology Conference for Students},
year = 1997,
organization = {University of Groningen}
}
@InProceedings{RoeWCSG:97,
AUTHOR = {Jos B. T. M. Roerdink and Mattijs J. B. van Delden and
Andrea J. S. Hin and Peter C. van Wolffelaar},
TITLE = {A Prototype System for Real Time Computer Animation of
Slow Traffic in a Driving Simulator},
BOOKTITLE = {Proceedings Fifth Intern. Conf. in Central Europe on
Computer Graphics and Visualization'97, Plze\v{n}, Czech
Republic, Febr. 10-14},
EDITOR = {Nadia Magnenat Thalmann and V\'aclav Skala},
YEAR = {1997},
PAGES = {455--464},
publisher = {University of West Bohemia Press},
pdf = {http://www.cs.rug.nl/~roe/publications/vsc-wscg.pdf}
}
@InProceedings{RoeMeijDagstuhl:97,
AUTHOR = "Jos B. T. M. Roerdink and Arnold Meijster",
TITLE = "Segmentation by watersheds: definition and parallel
implementation",
BOOKTITLE = {Advances in Computer Vision},
YEAR = "1997",
EDITOR = "Franc Solina and Walter G. Kropatsch and Reinhard Klette
and Ruzena Bajcsy",
PAGES = "21--30",
publisher = "Springer",
ADDRESS = "Wien, New York",
ANNOTE = {Proc. Schloss Dagstuhl Conference on Theoretical
Foundations of Computer Vision, March 1996},
pdf = {http://www.cs.rug.nl/~roe/publications/dagstuhl96.pdf}
}
% 1996 @Article{roerdink96:_comput,
author = {J. B. T. M. Roerdink},
TITLE = {Computer vision and mathematical morphology},
journal = {Computing, Supplement 11},
YEAR = 1996,
PAGES = {131--148},
ANNOTE = {BOOKTITLE = Theoretical Foundations of Computer Vision,
W. Kropatsch and R. Klette and F. Solina (eds.)},
pdf = {http://www.cs.rug.nl/~roe/publications/dagstuhl94.pdf}
}
@MastersThesis{Westenberg:1996:PTR,
author = {Michel A. Westenberg},
title = {Parallelisation of Tomographic Reconstruction Methods},
school = {University of Groningen},
year = 1996,
month = nov
}
@InProceedings{MeijRoeAtlanta:96,
AUTHOR = {A. Meijster and J. B. T. M. Roerdink},
EDITOR = {P. Maragos and R. W. Shafer and M. A. Butt},
TITLE = {Computation of Watersheds Based on Parallel Graph
Algorithms},
BOOKTITLE = {Mathematical Morphology and its Applications to Image and
Signal Processing},
YEAR = {1996},
publisher = {Kluwer Acad.\ Publ., Dordrecht},
PAGES = {305--312},
pdf = {http://www.cs.rug.nl/~roe/publications/atlanta.pdf}
}
@InProceedings{RoeTailor:96,
AUTHOR = {J. B. T. M. Roerdink},
EDITOR = {P. Maragos and R. W. Shafer and M. A. Butt},
TITLE = {The Generalized Tailor Problem},
BOOKTITLE = {Mathematical Morphology and its Applications to Image and
Signal Processing},
YEAR = {1996},
publisher = {Kluwer Acad.\ Publ., Dordrecht},
PAGES = {57--64},
pdf = {http://www.cs.rug.nl/~roe/publications/tailor.pdf}
}
% 1995
@InProceedings{CSNCSG:95,
AUTHOR = {J. B. T. M. Roerdink and G. S. M. Blaauwgeers},
TITLE = {{Minkowski} operations as a tool in Constructive Solid
Geometry},
BOOKTITLE = {Proc. Computing Science in the Netherlands, 27-28
november, Utrecht},
EDITOR = {J. C. van Vliet},
publisher = {Stichting Mathematisch Centrum, Amsterdam},
YEAR = {1995},
PAGES = {194--204}
}
@InProceedings{MeijRoeCSN:95,
AUTHOR = {A. Meijster and J. B. T. M. Roerdink},
TITLE = {The implementation of a parallel watershed algorithm},
BOOKTITLE = {Proc. Computing Science in the Netherlands, 27-28
november, Utrecht},
EDITOR = {J. C. van Vliet},
publisher = {Stichting Mathematisch Centrum, Amsterdam},
YEAR = {1995},
PAGES = {134--142}
}
@INPROCEEDINGS{MeijRoePolen:95,
AUTHOR = {A. Meijster and J. B. T. M. Roerdink},
TITLE = {An alternative algorithm for computing watersheds on
shared memory parallel computers},
BOOKTITLE = {Proc. Summer School on Morphological Image and Signal
Processing, 27-30 September, Zakopane, Poland},
PAGES = {37--42},
YEAR = {1995},
pdf = {http://www.cs.rug.nl/~roe/publications/zakopane.pdf}
}
@InProceedings{MeijRoePraag:95,
AUTHOR = {A. Meijster and J. B. T. M. Roerdink},
EDITOR = {V. Hlav\'a\v{c} and R. \v{S}\'ara},
TITLE = {A proposal for the implementation of a parallel watershed
algorithm},
BOOKTITLE = {Computer Analysis of Images and Patterns},
ANNOTE = {Proc. CAIP'95, September 6-8, Prague, Czech Republic},
PAGES = {790--795},
series = {Lecture Notes in Computer Science,},
publisher = {Springer, Wien, New York},
VOLUME = {970},
YEAR = {1995},
pdf = {http://www.cs.rug.nl/~roe/publications/caip95.pdf}
}
@INPROCEEDINGS{RoeIEEE:95,
AUTHOR = {J. B. T. M. Roerdink},
EDITOR = {I. Pitas},
TITLE = {Nonlinear image restoration in confocal microscopy:
stability under noise},
BOOKTITLE = {Proc. IEEE Workshop on Nonlinear Signal and Image
processing, June 20-22, Neos Marmaras, Halkidiki, Greece},
YEAR = {1995},
PAGES = {750--753},
pdf = {http://www.cs.rug.nl/~roe/publications/cslm3.pdf}
}
% 1994 @Article{RoeCSLM:94,
author = {J. B. T. M. Roerdink},
TITLE = {{FFT}-based methods for nonlinear image restoration in
confocal microscopy},
journal = {J.\ Math.\ Imag.\ Vision},
VOLUME = 4,
NUMBER = 2,
YEAR = 1994,
PAGES = {199--207},
ANNOTE = {\emph{Note:} Reprinted in Third Quinquennial Review
1991-1996, Dutch Society for Pattern Recognition and Image
Processing, Delft, 1996, pp. 55-63},
pdf = {http://www.cs.rug.nl/~roe/publications/convolII.pdf}
}
@Article{RoeNeutel:94,
author = {A. -M. Neutel and J. B. T. M. Roerdink and P. C. de
Ruiter},
TITLE = {Global stability of two-level detritus decomposer food
chains},
journal = {J.\ Theor.\ Biol.},
YEAR = {1994},
VOLUME = {171},
PAGES = {351--353}
}
@InProceedings{RoeCSN:94,
AUTHOR = {J. B. T. M. Roerdink},
TITLE = {Nonlinear image restoration in confocal microscopy},
BOOKTITLE = {Proc. Computing Science in the Netherlands, 21-22
november, Utrecht},
EDITOR = {E. Backer},
publisher = {Stichting Mathematisch Centrum, Amsterdam},
YEAR = {1994},
PAGES = {253--259}
}
@InProceedings{RoeDifgeo:94,
AUTHOR = {J. B. T. M. Roerdink},
EDITOR = {Y. -L. O and A. Toet and D. Foster and
H. J. A. M. Heijmans and P. Meer},
TITLE = {Manifold shape: from differential geometry to mathematical
morphology},
BOOKTITLE = {Shape in Picture},
ANNOTE = {Proc. Workshop Shape in Picture, Sept. 7-11, 1992,
Driebergen, the Netherlands},
PAGES = {209--223},
YEAR = {1994},
publisher = {Springer, Wien, New York},
SERIES = {NATO ASI Series},
VOLUME = {F 126},
ANNOTE = {Report CS 9204, 1992},
pdf = {http://www.cs.rug.nl/~roe/publications/shape.pdf}
}
@InProceedings{RoeVis:94,
AUTHOR = {J. B. T. M. Roerdink and G. S. M. Blaauwgeers},
EDITOR = {J. Serra and P. Soille},
TITLE = {Visualization of {Minkowski} operations by computer
graphics techniques},
BOOKTITLE = {Mathematical Morphology and its Applications to Image
Processing},
YEAR = {1994},
publisher = {Kluwer Acad.\ Publ., Dordrecht},
PAGES = {289--296},
pdf = {http://www.cs.rug.nl/~roe/publications/paris.pdf}
}
% 1993 @Article{RoeCSLM:93,
author = {J. B. T. M. Roerdink and M. Bakker},
ANNOTE = {RoeCSLM93},
TITLE = {An {FFT}-based method for attenuation correction in
fluorescence confocal microscopy},
ANNOTE = {Report AM-R9114, Centre for Mathematics and Computer
Science, Amsterdam, 1991},
journal = {J.\ Microscopy},
VOLUME = {169},
PAGES = {3--14},
YEAR = {1993},
pdf = {http://www.cs.rug.nl/~roe/publications/convolI.pdf}
}
@Article{RoerdinkZwaan:93,
author = {J. B. T. M. Roerdink and M. Zwaan},
YEAR = {1993},
TITLE = {Cardiac magnetic resonance imaging by retrospective
gating: mathematical modelling and reconstruction
algorithms},
ANNOTE = {Report AM-R9024, Centre for Mathematics and Computer
Science, Amsterdam, 1990},
journal = {Euro.\ Jnl of Applied Mathematics},
VOLUME = {4},
PAGES = {241--270},
pdf = {http://www.cs.rug.nl/~roe/publications/gating.pdf}
}
@INPROCEEDINGS{RoeBarc:93,
AUTHOR = {J. B. T. M. Roerdink},
EDITOR = {J. Serra and P. Salembier},
TITLE = {Solving the empty space problem in robot path planning by
mathematical morphology},
BOOKTITLE = {Proc. Workshop `Mathematical Morphology and its
Applications to Signal Processing', Barcelona, Spain, May
12-14},
YEAR = {1993},
PAGES = {216--221},
pdf = {http://www.cs.rug.nl/~roe/publications/barc.pdf}
}
@INPROCEEDINGS{RoeNoncom:93,
AUTHOR = {J. B. T. M. Roerdink},
EDITOR = {E. R. Dougherty},
ANNOTE = {RoeNoncomRef},
TITLE = {Mathematical morphology with non-commutative symmetry
groups},
BOOKTITLE = {Mathematical Morphology in Image Processing},
publisher = {Marcel Dekker, New York, NY},
YEAR = {1993},
CHAPTER = 7,
PAGES = {205--254}
}
% 1992 @Article{Roerdink:92,
author = {J. B. T. M. Roerdink},
TITLE = {Computerized tomography and its applications: a guided
tour},
ANNOTE = {Report CS 9206, |CS|},
YEAR = {1992},
journal = {Nieuw Archief voor Wiskunde},
VOLUME = {10},
NUMBER = {3, November},
PAGES = {277--308},
NOTE = {Special Issue on Image Processing},
pdf = {http://www.cs.rug.nl/~roe/publications/tomo_final.pdf}
}
@ARTICLE{92:RoerdinkNAW,
AUTHOR = {Roerdink, (guest~editor), J. B. T. M. },
YEAR = {1992},
TITLE = {Special Issue on Image Processing},
journal = {Nieuw Archief voor Wiskunde},
VOLUME = {10},
NUMBER = {3, November},
PAGES = {155--326},
ANNOTE = {NAW92}
}
% 1990 @Article{RoeMarkov:90,
author = {J. B. T. M. Roerdink},
YEAR = {1990},
TITLE = {A {Markov} chain identity and monotonicity of the
diffusion constants for a random walk in a heterogeneous
environment},
journal = {Math.\ Proc.\ Camb.\ Phil.\ Soc.},
VOLUME = {108},
PAGES = {111--126},
ANNOTE = {Report {AM-R8917}}
}
@Article{RoeShulerLawler:90,
author = {J. B. T. M. Roerdink and K. E. Shuler and G. F. Lawler},
YEAR = {1990},
TITLE = {Diffusion in lattices with anisotropic scatterers},
journal = {J.\ Statist.\ Phys.},
VOLUME = {59},
PAGES = {23--52},
ANNOTE = {Report {AM-R8921}}
}
@INPROCEEDINGS{RoeSphere:90,
AUTHOR = {J. B. T. M. Roerdink},
YEAR = {1990},
TITLE = {Mathematical morphology on the sphere},
BOOKTITLE = {Proc. SPIE Conf. Visual Communications and Image
Processing '90, Lausanne},
PAGES = {263--271}
}
% 1989 @Article{GrasmanRoe:89,
author = {J. Grasman and J. B. T. M. Roerdink},
YEAR = {1989},
TITLE = {Stochastic and chaotic relaxation oscillations},
journal = {J.\ Statist.\ Phys.},
VOLUME = {54},
ANNOTE = {Report {AM-R8704}},
PAGES = {949--970}
}
@Article{RoeBiennialII:89,
author = {J. B. T. M. Roerdink},
TITLE = {The biennial life strategy in a random
environment. {Supplement}},
journal = {J.\ Math.\ Biol.},
VOLUME = {27},
PAGES = {309--319},
YEAR = {1989},
ANNOTE = {Report {AM-R8811}}
}
@Article{RoeProducts:89,
author = {J. B. T. M. Roerdink},
YEAR = {1989},
TITLE = {Products of random matrices or `Why do biennials live
longer than two years?'},
journal = {CWI Quarterly},
VOLUME = {2},
NUMBER = {1},
PAGES = {37--44}
}
% 1988 @Article{RoeBiennialI:88,
author = {J. B. T. M. Roerdink},
TITLE = {The biennial life strategy in a random environment},
journal = {J.\ Math.\ Biol.},
VOLUME = {26},
PAGES = {199--215},
YEAR = {1988},
ANNOTE = {Report {AM-R8703}}
}
@Article{RoeHeij:88,
author = {J. B. T. M. Roerdink and H. J. A. M. Heijmans},
YEAR = {1988},
TITLE = {Mathematical morphology for structures without translation
symmetry},
journal = {Signal Processing},
VOLUME = {15},
PAGES = {271--277},
ANNOTE = {Report {AM-R8803}}
}
% 1985 @Article{RoeAsymp:85,
author = {J. B. T. M. Roerdink},
YEAR = {1985},
TITLE = {A note on the asymptotic properties of correlated random
walks},
journal = {J. Appl.\ Prob.},
VOLUME = {22},
PAGES = {951--956}
}
@Article{RoeBond:85,
author = {J. B. T. M. Roerdink},
YEAR = {1985},
TITLE = {On the calculation of random walk properties from lattice
bond enumeration},
journal = {Physica},
VOLUME = {132A},
PAGES = {253--268}
}
@Article{RoeShulerI:85,
author = {J. B. T. M. Roerdink and K. E. Shuler},
YEAR = {1985},
TITLE = {Asymptotic properties of multistate random
walks. {I. Theory}},
journal = {J.\ Statist.\ Phys.},
VOLUME = {40},
PAGES = {205--240}
}
@Article{RoeShulerII:85,
author = {J. B. T. M. Roerdink and K. E. Shuler},
YEAR = {1985},
TITLE = {Asymptotic properties of multistate random
walks. {II. Applications} to inhomogeneous periodic and
random lattices},
journal = {J.\ Statist.\ Phys.},
VOLUME = {41},
PAGES = {581--606}
}
% 1984 @Article{RoeCum:84,
author = {J. B. T. M. Roerdink},
YEAR = {1984},
TITLE = {Some additional remarks on the cumulant expansion for
linear stochastic differential equations},
journal = {Physica},
VOLUME = {123A},
PAGES = {369--385}
}
% 1983 @Article{RoeDifferenceI:83,
author = {J. B. T. M. Roerdink},
YEAR = {1983},
TITLE = {Approximate solution methods for linear stochastic
difference equations {I. Moments}},
journal = {Physica},
VOLUME = {119A},
PAGES = {455--484}
}
@Article{RoeDifferenceII:83,
author = {J. B. T. M. Roerdink},
YEAR = {1983},
TITLE = {Approximate solution methods for linear stochastic
difference equations {II. Inhomogeneous} equations,
multi-time averages, biological application},
journal = {Physica},
VOLUME = {120A},
PAGES = {153--177}
}
% 1982 @Article{RoeCum:82,
author = {J. B. T. M. Roerdink},
YEAR = 1982,
TITLE = {A cumulant expansion for the time correlation functions of
solutions to linear stochastic differential equations},
journal = {Physica},
VOLUME = {112A},
PAGES = {557--587}
}
% 1981 @Article{RoeWeyland:81,
author = {J. B. T. M. Roerdink and A. Weyland},
year = 1981,
title = {A generalized {Fokker-Planck} equation in the case of the
{Volterra} model},
journal = {Bull.\ Math.\ Biol.},
volume = 43,
pages = {69--79}
}
@Article{Roerandom:81,
author = {J. B. T. M. Roerdink},
year = 1981,
title = {Inhomogeneous linear random differential equations with
mutual correlations between multiplicative, additive and
initial value terms},
journal = {Physica},
volume = {109A},
pages = {23--57}
}